prot_D-mesarthrocarpus_Contig1004.4.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1004.4.1
Unique Nameprot_D-mesarthrocarpus_Contig1004.4.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length118
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: D7FM82_ECTSI (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM82_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.170e-23
Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 0
Query:   61 VKLSICGDDQVD-GEEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            VKL +CG+ + D G+EEMEEML +GP GKEWGGPTRGG L EPTRFGDWERKGRCSDF
Sbjct:   74 VKLDLCGEIEDDVGDEEMEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 131          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A7S3ZNR7_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNR7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.790e-19
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   57 EPDNVKLSICGDDQVDGEEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            +P   K+++  D +VD +++ME+M VD   GKEWGGPTRGGR+ EPTRFGDWERKGR +DF
Sbjct:   59 DPPPTKMNVAVDAEVDEDDDMEDMFVDTNMGKEWGGPTRGGRMPEPTRFGDWERKGRATDF 119          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A7S1U9V4_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9V4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 9.280e-19
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0
Query:   74 EEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            EE+ EEM++DGP GKEWGGP RGG+L+EPTRFGDWERKGRC+DF
Sbjct:   96 EEDWEEMILDGPAGKEWGGPRRGGKLAEPTRFGDWERKGRCTDF 139          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: W7TYA2_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYA2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.390e-17
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   61 VKLSICGDDQVDGEEEMEEMLVDGPKGK-EWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            VK   CG+ + + E+EMEEM V GP G+ EWGGPTRGGR  EPTRFGDWERKGRC+DF
Sbjct:  109 VKKDTCGEVE-EAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A6G0WXB9_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXB9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.610e-17
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
Query:   69 DQVDGEEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            D+ D EE+ME+M+V GP G EWGGP RGG+  EPTRFGDWE+KGRC DF
Sbjct:   47 DEDDDEEDMEDMVVIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 95          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A7S2BKF7_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BKF7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.900e-17
Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   44 SVNVKVERTELAKE---PDNVKLSICGDDQVDGEE------EMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            + N + +  +LA E   P  VK++ CG   +D EE      E EEM V+ P G EWGGP RGGR++EP RFGDWERKGRCSDF
Sbjct:   89 AANAQQKAFDLAAELSTPQGVKMAACG---LDDEEXXXXXXEWEEMFVETPVGLEWGGPLRGGRMAEPVRFGDWERKGRCSDF 168          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: W4GYH8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYH8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.240e-17
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
Query:   69 DQVDGEEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            D+ D EE+ME+M+V GP G EWGGP RGG+  EPTRFGDWE+KGRC DF
Sbjct:   42 DEDDDEEDMEDMVVIGPAGVEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 90          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A024U2R8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2R8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.230e-17
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
Query:   69 DQVDGEEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            D+ D EE+ME+M++ GP G EWGGP RGG+  EPTRFGDWE+KGRC DF
Sbjct:   46 DEDDDEEDMEDMVMIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 94          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A835YQ12_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ12_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.630e-16
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0
Query:   74 EEEMEEMLVDGPKGK-EWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            EE+ME+M V GP G  E+GGPTRGG+L+EPTRFGDWERKGRC+DF
Sbjct:    5 EEDMEQMFVPGPDGSMEYGGPTRGGKLAEPTRFGDWERKGRCTDF 49          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Match: A0A225W1X5_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W1X5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.340e-16
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:   68 DDQVDGEEEMEEMLVDGPKGKEWGGPTRGGRLSEPTRFGDWERKGRCSDF 117
            DD  D +++ E+M+  GP G E+GGPTRGG+L EPTRFGDWERKGRCSDF
Sbjct:   47 DDLDDEDDDGEDMVAIGPSGVEYGGPTRGGKLKEPTRFGDWERKGRCSDF 96          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1004.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM82_ECTSI2.170e-2377.59Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S3ZNR7_9STRA3.790e-1960.66Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S1U9V4_9STRA9.280e-1979.55Succinate dehydrogenase assembly factor 4, mitocho... [more]
W7TYA2_9STRA1.390e-1768.97Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A6G0WXB9_9STRA2.610e-1769.39Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S2BKF7_9STRA2.900e-1753.01Succinate dehydrogenase assembly factor 4, mitocho... [more]
W4GYH8_9STRA3.240e-1769.39Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A024U2R8_9STRA7.230e-1767.35Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A835YQ12_9STRA2.630e-1675.56Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A225W1X5_9STRA4.340e-1668.00Succinate dehydrogenase assembly factor 4, mitocho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012875Succinate dehydrogenase assembly factor 4PFAMPF07896DUF1674coord: 85..117
e-value: 2.0E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1004contigD-mesarthrocarpus_Contig1004:7316..7823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1004.4.1mRNA_D-mesarthrocarpus_Contig1004.4.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1004 7210..8545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1004.4.1 ID=prot_D-mesarthrocarpus_Contig1004.4.1|Name=mRNA_D-mesarthrocarpus_Contig1004.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=118bp
MAALRQIRLTFAPGFTSLSRRSPTMPLQHCKFVSGTTETTPTKSVNVKVE
RTELAKEPDNVKLSICGDDQVDGEEEMEEMLVDGPKGKEWGGPTRGGRLS
EPTRFGDWERKGRCSDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012875SDHF4