mRNA_D-mesarthrocarpus_Contig10030.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10030.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10030.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: A0A3B3IA24_ORYLA (BED-type domain-containing protein n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3IA24_ORYLA)

HSP 1 Score: 73.6 bits (179), Expect = 4.610e-13
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1
Query:    4 QASGKTPKKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATS--NQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAILDA 312
            Q  GK    +     TRW S Y+MLS LLE R+ V + ++    N R K   ++++   W  +EE+ ++LGPF  A E + G+KY+TLS +P L++ L  + L A
Sbjct:  305 QQMGKPLHMLIQDVSTRWNSTYHMLSRLLEQRWPVTAVLSDPAVNPRGKHHYLDLKPEQWHISEELTQILGPFEGATEFLSGEKYVTLSALPQLVQNLKKSTLTA 409          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: UPI00193A7931 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A7931)

HSP 1 Score: 61.6 bits (148), Expect = 6.920e-9
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 1
Query:   19 TPKKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSN--QRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLS----YIPCLMEGLN 294
            T K++ +   TRW S Y ML  L E ++ +L+ +   N     K  S+ I+  DW+  +++  +L PFAEA +L+ G+KY+++S    YI  L + L+
Sbjct:   92 TSKRLIMDVSTRWNSTYNMLVRLQELQWPILAILGNKNITNATKASSLTIKPGDWEIFKQLIPVLEPFAEATDLLGGEKYVSISIKNPYIKRLKKHLS 189          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: UPI00193A58C3 (E3 SUMO-protein ligase ZBED1-like n=3 Tax=Styela clava TaxID=7725 RepID=UPI00193A58C3)

HSP 1 Score: 61.6 bits (148), Expect = 7.260e-9
Identity = 30/94 (31.91%), Postives = 54/94 (57.45%), Query Frame = 1
Query:   19 TPKKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSN--QRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLN 294
            T K++ +   TRW S Y ML  L E ++ +L+ +   N     K  ++ I+  DW+  +++  +L PFAEA +L+ G+KY+++S     ++GL 
Sbjct:  302 TSKRLIMDVSTRWNSTYNMLVRLQELQWPILAILGNKNITNATKASALTIKPGDWEIFKQLIPVLEPFAEATDLLGGEKYVSISIKNPYIKGLK 395          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: UPI0007B9877B (zinc finger BED domain-containing protein 4-like n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B9877B)

HSP 1 Score: 60.1 bits (144), Expect = 2.120e-8
Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   25 KKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAILD 309
            K IP++  TRW S +  +  + E  +  L+ + + + +    ++ I   +W    E+C +LGPFAEA EL EG+K IT+S +   +  LN  ++ 
Sbjct:   29 KSIPVATVTRWNSTFKQIKAITELDHTTLTEMCSPDFK----NVVITTREWAQLRELCLILGPFAEATELTEGEKIITISMVVPTVLDLNTHLIQ 119          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: A0A673G3B6_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G3B6_9TELE)

HSP 1 Score: 60.1 bits (144), Expect = 2.460e-8
Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   25 KKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAILD 309
            K IP++  TRW S +  +  + E  +  L+ + + + +    ++ I   +W    E+C +LGPFAEA EL EG+K IT+S +   +  LN  ++ 
Sbjct:  259 KSIPVATVTRWNSTFKQIKAITELDHTTLTEMCSPDFK----NVVITTREWAQLRELCLILGPFAEATELTEGEKIITISMVVPTVLDLNTHLIQ 349          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: UPI0007B7FAEF (uncharacterized protein LOC107688923 n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B7FAEF)

HSP 1 Score: 58.9 bits (141), Expect = 4.580e-8
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   25 KKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAILD 309
            K IP++  TRW S +  +  + E  +  L+ + + + +    ++ I   +W    E+C +LGPFAEA EL +G+K IT+S +   +  LN  ++ 
Sbjct:   93 KSIPVATVTRWNSTFKQIKAITELDHTTLTEMCSPDFK----NVVITTREWAQLRELCLILGPFAEATELTDGEKIITISMVVPTVLDLNTHLIQ 183          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: A0A671NDY4_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671NDY4_9TELE)

HSP 1 Score: 58.9 bits (141), Expect = 6.300e-8
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   25 KKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAILD 309
            K IP++  TRW S +  +  + E  +  L+ + + + +    ++ I   +W    E+C +LGPFAEA EL +G+K IT+S +   +  LN  ++ 
Sbjct:  273 KSIPVATVTRWNSTFKQIKAITELDHTTLTEMCSPDFK----NVVITTREWAQLRELCLILGPFAEATELTDGEKIITISMVVPTVLDLNTHLIQ 363          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: UPI000CD5CDBB (zinc finger BED domain-containing protein 4-like n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD5CDBB)

HSP 1 Score: 58.2 bits (139), Expect = 1.100e-7
Identity = 29/88 (32.95%), Postives = 51/88 (57.95%), Query Frame = 1
Query:   25 KKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYI-PCLME 285
            K IP+S  TRW S +  +  ++E  +  L+ + + +      ++ +   +W    E+ ++LGPFAEA EL EGDK +T+S + P ++E
Sbjct:   39 KSIPVSNVTRWNSQFRQIQAVIELDHTALTQMCSVDFE----NVVLSSREWAQCRELTQILGPFAEATELTEGDKIVTISMVVPTVLE 122          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: A0A6P6NB89_CARAU (zinc finger BED domain-containing protein 4-like n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6NB89_CARAU)

HSP 1 Score: 55.8 bits (133), Expect = 7.490e-7
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   25 KKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAILD 309
            K IP++  TRW S +  +  + E  +  L+ + + + +    ++ I   ++    E+C +LGPFAEA EL EG+K IT+S +   +  LN  ++ 
Sbjct:  113 KSIPVATVTRWNSTFKQVQAITELDHTTLTEMCSPDFK----NVVITTREFAQLRELCLILGPFAEATELTEGEKIITISMVVPTVLDLNTHLIQ 203          
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Match: A0A3B5QWW9_XIPMA (Dimer_Tnp_hAT domain-containing protein n=10 Tax=Xiphophorus TaxID=8082 RepID=A0A3B5QWW9_XIPMA)

HSP 1 Score: 55.1 bits (131), Expect = 1.450e-6
Identity = 28/101 (27.72%), Postives = 52/101 (51.49%), Query Frame = 1
Query:    4 QASGKTPKKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGPSINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVAIL 306
            +A+  T K +P +  TRW S +  +  L    ++ LS +   +       +     +W+  +E+C +L PFAEA EL +G++ +T+S +   +  LN  +L
Sbjct:  356 EAAFGTNKSVPAANTTRWNSTFKQVQALTTLEHKSLSEMCNKDYE----DVVFSAREWNQLKELCIVLSPFAEATELTQGERSVTISMVVPTVLDLNTHLL 452          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10030.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B3IA24_ORYLA4.610e-1337.14BED-type domain-containing protein n=1 Tax=Oryzias... [more]
UPI00193A79316.920e-933.67E3 SUMO-protein ligase ZBED1-like n=1 Tax=Styela c... [more]
UPI00193A58C37.260e-931.91E3 SUMO-protein ligase ZBED1-like n=3 Tax=Styela c... [more]
UPI0007B9877B2.120e-831.58zinc finger BED domain-containing protein 4-like n... [more]
A0A673G3B6_9TELE2.460e-831.58Dimer_Tnp_hAT domain-containing protein n=1 Tax=Si... [more]
UPI0007B7FAEF4.580e-830.53uncharacterized protein LOC107688923 n=1 Tax=Sinoc... [more]
A0A671NDY4_9TELE6.300e-830.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Si... [more]
UPI000CD5CDBB1.100e-732.95zinc finger BED domain-containing protein 4-like n... [more]
A0A6P6NB89_CARAU7.490e-730.53zinc finger BED domain-containing protein 4-like n... [more]
A0A3B5QWW9_XIPMA1.450e-627.72Dimer_Tnp_hAT domain-containing protein n=10 Tax=X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10030contigD-mesarthrocarpus_Contig10030:3759..4070 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7029.ACYPI20233-PA
PFAMsDUF659,Dimer_Tnp_hAT,zf-BED
Model size312
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.45e-10
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota,39TTD@33154|Opisthokonta,3BCXB@33208|Metazoa,3CYBV@33213|Bilateria,421HB@6656|Arthropoda,3SQZQ@50557|Insecta
DescriptionRNA polymerase II regulatory region DNA binding
Cds size312
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789149.4620543-CDS-D-mesarthrocarpus_Contig10030:3758..40701680789149.4620543-CDS-D-mesarthrocarpus_Contig10030:3758..4070Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10030 3759..4070 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10030.3.1prot_D-mesarthrocarpus_Contig10030.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10030 3759..4070 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10030.3.1

>prot_D-mesarthrocarpus_Contig10030.3.1 ID=prot_D-mesarthrocarpus_Contig10030.3.1|Name=mRNA_D-mesarthrocarpus_Contig10030.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=104bp
KQASGKTPKKIPISCKTRWWSYYYMLSTLLEYRYEVLSTIATSNQRAKGP
SINIRGADWDNAEEMCKMLGPFAEAVELIEGDKYITLSYIPCLMEGLNVA
ILDA
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mRNA from alignment at D-mesarthrocarpus_Contig10030:3759..4070+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10030.3.1 ID=mRNA_D-mesarthrocarpus_Contig10030.3.1|Name=mRNA_D-mesarthrocarpus_Contig10030.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=312bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10030:3759..4070+ (Discosporangium mesarthrocarpum MT17_79)
AAACAGGCCAGTGGCAAGACTCCTAAGAAGATCCCTATTTCGTGCAAGAC GAGGTGGTGGTCATACTACTACATGCTGAGCACCCTACTGGAATATAGAT ACGAGGTGCTGTCCACAATTGCGACCTCAAACCAACGAGCCAAGGGCCCC AGTATCAACATCCGAGGTGCAGACTGGGACAACGCAGAGGAGATGTGCAA GATGCTGGGTCCTTTCGCAGAGGCTGTGGAGCTCATTGAAGGTGACAAAT ATATCACCCTCAGCTACATCCCCTGCCTGATGGAGGGACTCAACGTGGCA ATCCTTGACGCG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10030:3759..4070+

>mRNA_D-mesarthrocarpus_Contig10030.3.1 ID=mRNA_D-mesarthrocarpus_Contig10030.3.1|Name=mRNA_D-mesarthrocarpus_Contig10030.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=312bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10030:3759..4070+ (Discosporangium mesarthrocarpum MT17_79)
AAACAGGCCAGTGGCAAGACTCCTAAGAAGATCCCTATTTCGTGCAAGAC
GAGGTGGTGGTCATACTACTACATGCTGAGCACCCTACTGGAATATAGAT
ACGAGGTGCTGTCCACAATTGCGACCTCAAACCAACGAGCCAAGGGCCCC
AGTATCAACATCCGAGGTGCAGACTGGGACAACGCAGAGGAGATGTGCAA
GATGCTGGGTCCTTTCGCAGAGGCTGTGGAGCTCATTGAAGGTGACAAAT
ATATCACCCTCAGCTACATCCCCTGCCTGATGGAGGGACTCAACGTGGCA
ATCCTTGACGCG
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