mRNA_D-mesarthrocarpus_Contig1003.1.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE) HSP 1 Score: 246 bits (629), Expect = 6.790e-71 Identity = 123/166 (74.10%), Postives = 136/166 (81.93%), Query Frame = 1 Query: 202 STAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMKAFAPAEGEGATESAAETTTET 699
STA FEPVVQLEEVEVKTHEEDEE+LWKMRAKLFI+GETLLNKGTG KEWVERGIGEVKFL+HK + F+R LMRQEKTMKVICNHV DPRIVLKPNAGSDRSWVWNA+DF EG LEE+TFA+RFG ++SA EFKE F AQ+ ++ E A ET T
Sbjct: 49 STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKEQFTAAQKVVEGLMAGEAPEPAAEAEETAPAT 214
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.410e-58 Identity = 101/145 (69.66%), Postives = 119/145 (82.07%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKM 633
E T FEPVVQL+EVEVKTHEEDE++L+KMRAKLF++GETLLNKG+G K W ERG+GEVKFL+H+E IR LMRQEKTMK+I NHV DPRIVLKPN GSDRSWVW AYDF + L E FAIRFG +++A EFKE F + ++ M
Sbjct: 44 ECTTVFEPVVQLDEVEVKTHEEDEQVLYKMRAKLFVFGETLLNKGSGTKTWNERGVGEVKFLKHREHEKIRLLMRQEKTMKIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEFKEKFEEVKKDM 188
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.630e-58 Identity = 107/162 (66.05%), Postives = 127/162 (78.40%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMKAFAPAE-GEGATESAA 681
ESTAHFEPVVQL+E+EVKTHEE+EE+LWK R KLF++GETLLNKGTG K W ERGIGE KFL+HKE IR LMRQE+TMKVICNHVVDPRI ++ NAGSDRSWVW+A+DF++G L E FAIRF ++ A +FK+ F Q M + E GA+E AA
Sbjct: 68 ESTAHFEPVVQLDEIEVKTHEEEEEVLWKWRGKLFVFGETLLNKGTGQKTWNERGIGEFKFLKHKEHQKIRALMRQERTMKVICNHVVDPRIQMQMNAGSDRSWVWSAFDFSDGELVETVFAIRFANSDIAQDFKKQFDTHQATMASLMSGEDAPGASEDAA 229
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA) HSP 1 Score: 211 bits (537), Expect = 5.440e-58 Identity = 100/147 (68.03%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMKA 639
ESTA F PVVQL+EVEVKTHEEDE++ +K+RAKLF + ETLLNKG+G KEW+ERG+GEVK L+H+E+ +R LMRQEKTMK+ICNHVVDPRI L+PN GSDRSWVW+A+DF+ G LE+ FAIRFG ++ A E+K F KA+ MKA
Sbjct: 94 ESTAEFTPVVQLDEVEVKTHEEDEDVDFKIRAKLFRFSETLLNKGSGKKEWIERGVGEVKILKHRENSMVRVLMRQEKTMKIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEYKAAFEKAKSHMKA 240
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.140e-54 Identity = 102/167 (61.08%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMKAFAPAE-------GEGATESA 678
ESTA F+PVV+LEEVEVK+ EEDEE+++ MRAKLF++GETLL+KGTG K W ERGIGE + L H+E +R LMRQEKTMKVI NH VDPRI L+PNAGSDRSWVW+A+DF++G LEE FA+RF +E A +FK F++ Q++M+A E G GA E+A
Sbjct: 28 ESTATFKPVVELEEVEVKSGEEDEEVVFSMRAKLFLFGETLLDKGTGNKSWRERGIGEARILRHREHQRLRFLMRQEKTMKVIANHAVDPRIKLEPNAGSDRSWVWSAFDFSDGELEETVFALRFADSEIANDFKTKFLECQKEMEAILAGEDKPGEDGGAGADEAA 194
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO) HSP 1 Score: 199 bits (506), Expect = 1.210e-54 Identity = 97/145 (66.90%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKM 633
ESTA FEPVV+LEEV+VK+ EE+EE+L+ R+KLFIYGETLL++GTG K W ERGIGEV+ L+H+E IR LMRQEKTMKVI NHVVDP+I L+PN GSDRSWVW+A+DFAEG L+E FAIRFG ++ A EF++ F++ Q +M
Sbjct: 28 ESTATFEPVVKLEEVDVKSGEEEEEVLYTKRSKLFIYGETLLDQGTGNKTWRERGIGEVRLLKHREHQKIRLLMRQEKTMKVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFRDKFLECQSEM 172
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A7S3NPI9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPI9_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.940e-54 Identity = 96/145 (66.21%), Postives = 118/145 (81.38%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKM 633
EST F PVVQL+EVEVKT EEDEEI++KMRA+L+ + ETLLNKGTG KEW+ERG+GE K L+H+E IR LMRQEKTMK+I NHV+DPRI L+PNAG+D+SWVW A+DF+EG L + FAIRF E+AT+FK+ F AQ+ M
Sbjct: 81 ESTQEFTPVVQLDEVEVKTLEEDEEIIFKMRARLYRFAETLLNKGTGKKEWIERGVGEAKLLKHREHSKIRLLMRQEKTMKIIVNHVIDPRIQLQPNAGNDKSWVWGAWDFSEGELVDEVFAIRFANAENATKFKDAFTNAQQVM 225
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A7S1VE37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE37_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.250e-53 Identity = 96/143 (67.13%), Postives = 116/143 (81.12%), Query Frame = 1 Query: 208 AHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMK 636
A FEPVV+LEEVE KT EEDEE L+ MR+KLFI+GET+L+ GTG K W ERGIGE++ L+HK+ IR LMRQEKTMKVICNHV+DPRI L+PN GSDRSWVW+A+DFAEG L+E FAIRF ++ A EFK F + Q++MK
Sbjct: 25 ATFEPVVKLEEVETKTGEEDEEALFSMRSKLFIFGETMLDVGTGKKTWRERGIGEIRLLKHKQHERIRILMRQEKTMKVICNHVLDPRITLEPNVGSDRSWVWSAFDFAEGDLKETVFAIRFSSSDVAKEFKAKFEECQKEMK 167
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: A0A812SY93_SYMMI (YRB1 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SY93_SYMMI) HSP 1 Score: 194 bits (494), Expect = 2.510e-53 Identity = 99/147 (67.35%), Postives = 115/147 (78.23%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAG-SDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMK 636
ESTA F PVV LE VEVKTHEEDE+IL+ RAKL+ YGE+LLNKGTG K W ERG GE+K L+HKE+ +R LMRQEKTMKVI NHV+D RIV+ PN+G SDRSWVW A+DFA+G L E TFA++FG A EFKE F K Q +MK
Sbjct: 2 ESTAVFTPVVHLEAVEVKTHEEDEDILFVKRAKLYQYGESLLNKGTGNKTWNERGTGEMKILKHKETSHVRALMRQEKTMKVIANHVLDYRIVIVPNSGASDRSWVWTAFDFADGELTEKTFAVKFGDAAGANEFKESFTKGQNEMK 148
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Match: B7FP98_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP98_PHATC) HSP 1 Score: 194 bits (492), Expect = 1.250e-52 Identity = 97/147 (65.99%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 199 ESTAHFEPVVQLEEVEVKTHEEDEEILWKMRAKLFIYGETLLNKGTGIKEWVERGIGEVKFLEHKESGFIRTLMRQEKTMKVICNHVVDPRIVLKPNAGSDRSWVWNAYDFAEGSLEEVTFAIRFGKTESATEFKEHFIKAQEKMKA 639
ESTA FE VV+LEEVEVK+ EE+EE+L+ R+KLFI+GETLL+KGTG K W ERGIG+++ L H+E IR LMRQEKTMKVI NH +DPR VLKPNAG+DRSWVW+A+DFA G L E FAIRFG ++ A EFK F K Q +M+A
Sbjct: 33 ESTATFEAVVKLEEVEVKSGEEEEEVLFSQRSKLFIFGETLLDKGTGTKSWRERGIGDIRILRHREHQRIRVLMRQEKTMKVIANHALDPRCVLKPNAGNDRSWVWSAFDFAGGELVETVFAIRFGDSDKALEFKAAFEKYQGEMQA 179 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1003.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1003.1.3 >prot_D-mesarthrocarpus_Contig1003.1.3 ID=prot_D-mesarthrocarpus_Contig1003.1.3|Name=mRNA_D-mesarthrocarpus_Contig1003.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=261bp MSDFAALAAKASASTEPDFAADAAAPATGEEPAVVHEEESTAHFEPVVQLback to top mRNA from alignment at D-mesarthrocarpus_Contig1003:6032..14572+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1003.1.3 ID=mRNA_D-mesarthrocarpus_Contig1003.1.3|Name=mRNA_D-mesarthrocarpus_Contig1003.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=8541bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1003:6032..14572+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1003:6032..14572+ >mRNA_D-mesarthrocarpus_Contig1003.1.3 ID=mRNA_D-mesarthrocarpus_Contig1003.1.3|Name=mRNA_D-mesarthrocarpus_Contig1003.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=783bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1003:6032..14572+ (Discosporangium mesarthrocarpum MT17_79)back to top |