mRNA_D-mesarthrocarpus_Contig10026.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10026.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig10026.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10026.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10026contigD-mesarthrocarpus_Contig10026:4170..4539 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size372
Hectar predicted targeting categoryother localisation
Exons1
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-27_000200.1
Cds size369
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789148.7127879-CDS-D-mesarthrocarpus_Contig10026:4169..45381680789148.7127879-CDS-D-mesarthrocarpus_Contig10026:4169..4538Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10026 4170..4538 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10026.4.1prot_D-mesarthrocarpus_Contig10026.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10026 4170..4538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10026.4.1

>prot_D-mesarthrocarpus_Contig10026.4.1 ID=prot_D-mesarthrocarpus_Contig10026.4.1|Name=mRNA_D-mesarthrocarpus_Contig10026.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=123bp
ADPGKLTPQGPSASQQQQLHASQHGMQGMPPEAVGAAGAHPHPHAHRGVA
LPSAGSATTDAGPARAPARAPPLLPLQPLVLANASAKADLVPGCAECRAQ
KRARLDEPVLLREERHNQDVFGW
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mRNA from alignment at D-mesarthrocarpus_Contig10026:4170..4539+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10026.4.1 ID=mRNA_D-mesarthrocarpus_Contig10026.4.1|Name=mRNA_D-mesarthrocarpus_Contig10026.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=370bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10026:4170..4539+ (Discosporangium mesarthrocarpum MT17_79)
GCTGACCCGGGGAAGCTGACCCCCCAGGGTCCTTCCGCCTCCCAGCAGCA
ACAACTCCATGCTTCTCAGCACGGGATGCAAGGCATGCCGCCGGAAGCTG
TCGGCGCGGCCGGGGCACACCCCCACCCCCATGCCCACAGAGGCGTGGCG
CTTCCTTCCGCAGGCTCCGCAACAACGGACGCTGGCCCGGCGCGTGCCCC
GGCGCGTGCCCCGCCGCTTCTTCCGCTGCAGCCGCTGGTTCTGGCCAACG
CAAGCGCCAAGGCGGACCTGGTACCGGGGTGCGCGGAGTGTAGAGCGCAA
AAGAGAGCCAGGCTTGACGAGCCGGTGCTGCTCCGTGAGGAGCGCCACAA
TCAGGACGTGTTCGGGTGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10026:4170..4539+

>mRNA_D-mesarthrocarpus_Contig10026.4.1 ID=mRNA_D-mesarthrocarpus_Contig10026.4.1|Name=mRNA_D-mesarthrocarpus_Contig10026.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=369bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10026:4170..4539+ (Discosporangium mesarthrocarpum MT17_79)
GCTGACCCGGGGAAGCTGACCCCCCAGGGTCCTTCCGCCTCCCAGCAGCA
ACAACTCCATGCTTCTCAGCACGGGATGCAAGGCATGCCGCCGGAAGCTG
TCGGCGCGGCCGGGGCACACCCCCACCCCCATGCCCACAGAGGCGTGGCG
CTTCCTTCCGCAGGCTCCGCAACAACGGACGCTGGCCCGGCGCGTGCCCC
GGCGCGTGCCCCGCCGCTTCTTCCGCTGCAGCCGCTGGTTCTGGCCAACG
CAAGCGCCAAGGCGGACCTGGTACCGGGGTGCGCGGAGTGTAGAGCGCAA
AAGAGAGCCAGGCTTGACGAGCCGGTGCTGCTCCGTGAGGAGCGCCACAA
TCAGGACGTGTTCGGGTGG
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