Homology
BLAST of mRNA_D-mesarthrocarpus_Contig995.4.1 vs. uniprot
Match:
D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)
HSP 1 Score: 118 bits (295), Expect = 2.610e-27
Identity = 82/199 (41.21%), Postives = 103/199 (51.76%), Query Frame = 0
Query: 3 GLLGEYLEGSPLLSDLLALWDLPLRKSVVAIAAAHTEALAAVLDCLAGVVAKGISALGPGPDAAEPCGTRARVGGKAGPAGAXXXXXXGSVVEGAEATGLGLCRRIIRERFSQLCSQLGPTSNK------------------------DKGEGIEEDQVVATLRLLVGIVRFHRLAAKEVMGCFDFNSKAFLSLMSRKG 177
GLLGEYL GSP L+DLL LWDL RKS +AAAHT++ AAVL+CLA V+ R G A GA G +E ATGLGLCRR+ R++ + +QL P++ G E+ ATLRLL + RFHRLAAKE+ G F+F+ KAF+ L+SRKG
Sbjct: 122 GLLGEYLRGSPQLNDLLHLWDLDQRKSSPVLAAAHTDSFAAVLECLAAVL-------------------RHLAAGSA-VTGAVSAVARGEAIE---ATGLGLCRRLTRDKMDDIHAQLHPSAGSASXXXXXXXXXXXXXXXXTKAGAVQAGALTGEEVAAATLRLLTSVARFHRLAAKELAGVFNFSHKAFVKLVSRKG 297
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig995.4.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
V V G L L G E Y L E G S P L L S D L L A L W D L P L R K S V V A I A A A H T E A L A A V L D C L A G V V A K G I S A L G P G P D A A E P C G T R A R V G G K A G P A G A G A G A G G G S V V E G A E A T G L G L C R R I I R E R F S Q L C S Q L G P T S N K D K G E G I E E D Q V V A T L R L L V G I V R F H R L A A K E V M G C F D F N S K A F L S L M S R K G V G T L A D G T V G G Q E 20 40 60 80 100 120 140 160 180 Expect = 2.61e-27 / Id = 41.21 Sequence D7G8A9_ECTSI
Match Name E-value Identity Description
D7G8A9_ECTSI 2.610e-27 41.21 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
V V G L L G E Y L E G S P L L S D L L A L W D L P L R K S V V A I A A A H T E A L A A V L D C L A G V V A K G I S A L G P G P D A A E P C G T R A R V G G K A G P A G A G A G A G G G S V V E G A E A T G L G L C R R I I R E R F S Q L C S Q L G P T S N K D K G E G I E E D Q V V A T L R L L V G I V R F H R L A A K E V M G C F D F N S K A F L S L M S R K G V G T L A D G T V G G Q E 20 40 60 80 100 120 140 160 180 Expect = 5.4E-6 / Score = 26.0 Sequence PF11707
IPR Term IPR Description Source Source Term Source Description Alignment
IPR021714 Nucleolar pre-ribosomal-associated protein 1, N-terminal PFAM PF11707 Npa1 coord: 96..176
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_D-mesarthrocarpus_Contig995.4.1 ID=prot_D-mesarthrocarpus_Contig995.4.1|Name=mRNA_D-mesarthrocarpus_Contig995.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=190bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR021714 Npa1_N