Homology
BLAST of mRNA_D-mesarthrocarpus_Contig983.2.2 vs. uniprot
Match: D7FS80_ECTSI (B1358B12.18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS80_ECTSI) HSP 1 Score: 135 bits (339), Expect = 4.730e-33 Identity = 134/212 (63.21%), Postives = 160/212 (75.47%), Query Frame = 0 Query: 142 KNSLMEQMLKTAGQRQHWQEAIDLFDKMKAEGMSLDKLAYVAALRACSKGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVSLYTAVMNACYTVGDLDGILAVADRLRDQRLKPDHSTYHLMVTSHIGRLDWVSATKALVDMSKDGLVPSKRSARQWRLASAALEEVDLDVDE----RDGEKAGTR 349
K LM QM+K AGQRQHW+EAI LFD+M+ +G+ K AY AALR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VGD+D ILA+ ++LR Q L PDH+ YHL+VTSHI +LDWVSAT+ALV+M + GL P+ SAR+WRLA+A +EE+D++V+E R+GE+A R
Sbjct: 89 KKRLMAQMVKAAGQRQHWKEAIVLFDQMQEKGVPTVKAAYGAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDMDAILAIGEQLRAQSLTPDHAGYHLIVTSHISKLDWVSATEALVEMGEAGLAPTAGSARKWRLANAVIEEIDIEVNEDYMPREGEEADDR 300
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig983.2.2 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D7FS80_ECTSI | 4.730e-33 | 63.21 | B1358B12.18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 149..177
e-value: 0.0017
score: 16.4 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 212..246
score: 9.492543 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 142..352
e-value: 3.9E-36
score: 127.0 |
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 144..296
e-value: 2.7E-13
score: 49.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 337..356 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 340..356 |
| IPR044657 | Pentatricopeptide repeat-containing protein NFD5-like | PANTHER | PTHR46862 | OS07G0661900 PROTEIN | coord: 150..319 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_D-mesarthrocarpus_Contig983.2.2 ID=prot_D-mesarthrocarpus_Contig983.2.2|Name=mRNA_D-mesarthrocarpus_Contig983.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=357bp
MASNVISTWVVGFVALSTTCSAFAPVAPYSTCPPGERWWSTDGTLYKESS
VPRPRPSSESRRVRPDRRMAGCRAAATALMTVTGHGCLGVDHYRARIWRR
CRRPRSGQGWGQAPVQATKGGAGGGSASGREVEVSFLKGVGKNSLMEQML
KTAGQRQHWQEAIDLFDKMKAEGMSLDKLAYVAALRACSKGAAWERAIQL
FDNCIEEGYDLDEVMVTSAVKACCQAGRPVEAEALLAKGVARGVQPKVSL
YTAVMNACYTVGDLDGILAVADRLRDQRLKPDHSTYHLMVTSHIGRLDWV
SATKALVDMSKDGLVPSKRSARQWRLASAALEEVDLDVDERDGEKAGTRE
DEDRNV* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
|