prot_D-mesarthrocarpus_Contig9635.4.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9635.4.1
Unique Nameprot_D-mesarthrocarpus_Contig9635.4.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length185
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A846FUY6_9CYAN (30S ribosomal protein S6 n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FUY6_9CYAN)

HSP 1 Score: 229 bits (585), Expect = 4.420e-74
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVK 114
            MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVK
Sbjct:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVK 114          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A5C6RTN9_9BACT (30S ribosomal protein S6 n=1 Tax=Phaeodactylibacter luteus TaxID=1564516 RepID=A0A5C6RTN9_9BACT)

HSP 1 Score: 191 bits (485), Expect = 2.240e-59
Identity = 93/115 (80.87%), Postives = 101/115 (87.83%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKK 115
            MKNYEVTFIVDPVLSGDEIKATAQTYVD +K EG +I+HVDEMGLR LAYPINRR SG+Y+ VEF+ PNGELID +ELA RRDERIMRFL + LDKYGVKYN DKR G IGKVKK
Sbjct:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDHLKNEGCQIVHVDEMGLRQLAYPINRRTSGIYYCVEFEAPNGELIDPMELAFRRDERIMRFLSVALDKYGVKYNADKRAGKIGKVKK 115          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A2D0MYC4_9BACT (30S ribosomal protein S6 n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0MYC4_9BACT)

HSP 1 Score: 186 bits (473), Expect = 2.830e-57
Identity = 92/115 (80.00%), Postives = 104/115 (90.43%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKK 115
            MK+YE+TFIVDPVLSGDEIKATAQTYVDQ+K+ G  I+HVDEMGLR LAYPIN+R+SGVY+TVEF   +G  IDKLEL+LRRDERIMRFL ++LDKYGVKYNEDKR GLIGKVKK
Sbjct:    1 MKSYEITFIVDPVLSGDEIKATAQTYVDQLKEVGATIVHVDEMGLRQLAYPINKRSSGVYYTVEFTIEDGTPIDKLELSLRRDERIMRFLTVRLDKYGVKYNEDKRKGLIGKVKK 115          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A098RZL8_9BACT (30S ribosomal protein S6 n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=A0A098RZL8_9BACT)

HSP 1 Score: 186 bits (471), Expect = 3.300e-57
Identity = 91/116 (78.45%), Postives = 101/116 (87.07%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKKK 116
            MKNYEVTFIVDPVLS +EI+ATAQTYVD +K EG +I+HVDEMGLR LAYPINRR SG+Y+ +EF+ PNGELID +ELALRRDERIMRFL   LDKYGVKYN DKR G IGKVKKK
Sbjct:    1 MKNYEVTFIVDPVLSREEIEATAQTYVDHLKNEGCQIVHVDEMGLRQLAYPINRRTSGIYYCIEFEAPNGELIDVMELALRRDERIMRFLTAALDKYGVKYNADKRAGKIGKVKKK 116          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A7Y5R6L7_9BACT (30S ribosomal protein S6 n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y5R6L7_9BACT)

HSP 1 Score: 184 bits (466), Expect = 1.720e-56
Identity = 89/119 (74.79%), Postives = 102/119 (85.71%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKKKEKK 119
            MK  EVTFIVDPVLSGDEI+ATAQTYVD +K  G  I+HVD+MGLRTLA+PI +RNSGVYF +EFQ P G +ID +ELALRRDERIMRFL +KLDKYGVKYNEDKRNGLIGK  +++ K
Sbjct:    1 MKQLEVTFIVDPVLSGDEIQATAQTYVDLLKNNGCTIVHVDDMGLRTLAFPIRKRNSGVYFCIEFQTPTGSIIDNMELALRRDERIMRFLTVKLDKYGVKYNEDKRNGLIGKKSRRQDK 119          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A2T4XAF4_9BACT (30S ribosomal protein S6 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4XAF4_9BACT)

HSP 1 Score: 183 bits (464), Expect = 7.230e-56
Identity = 90/122 (73.77%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKK---KEKK 119
            M+NYEVTFIVDPVLSG+EIK TAQ Y D +K  G  I+H+DEMGLRTLAYPIN+RNSGVY+ +EFQ  NGE  D LELALRRDERIMRFL  +LDK+G+KYNEDKRNGLIGK K+   KEKK
Sbjct:    1 MRNYEVTFIVDPVLSGEEIKTTAQAYSDMLKGAGANIVHIDEMGLRTLAYPINKRNSGVYYCIEFQSENGEFTDDLELALRRDERIMRFLTFRLDKFGIKYNEDKRNGLIGKAKRPKAKEKK 122          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A3M0YWS9_9BACT (30S ribosomal protein S6 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M0YWS9_9BACT)

HSP 1 Score: 179 bits (455), Expect = 4.130e-55
Identity = 85/112 (75.89%), Postives = 101/112 (90.18%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGK 112
            M++YEVTFIVDPVLSGDEIKATAQ+YVD +KK G EI+HVDEMGLR LAYPIN+R++GVY+ +EF+ P+G +ID LELA+RRDERIMRFL +KLDKYGVK+NEDKR G IGK
Sbjct:    1 MRDYEVTFIVDPVLSGDEIKATAQSYVDHLKKAGCEIVHVDEMGLRELAYPINKRSTGVYYCIEFKAPDGSVIDPLELAMRRDERIMRFLTVKLDKYGVKFNEDKRAGRIGK 112          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: UPI000365C705 (30S ribosomal protein S6 n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI000365C705)

HSP 1 Score: 178 bits (452), Expect = 5.260e-54
Identity = 87/121 (71.90%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKKKEKKSR 121
            M+NYEVTFIVDPVLSG+EIK TAQTY D +K     I+H+DEMGLRTLAYPIN+RNSGVY+ +EFQ    +LID LELALRRDERIMRFL  KLDK+G+KYNEDKRNGLIGK K+ + K +
Sbjct:    1 MRNYEVTFIVDPVLSGEEIKTTAQTYSDMLKTAKANIVHIDEMGLRTLAYPINKRNSGVYYCIEFQMETVDLIDDLELALRRDERIMRFLTYKLDKFGIKYNEDKRNGLIGKAKRPKSKEK 121          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A7Y2C2N6_9BACT (30S ribosomal protein S6 n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y2C2N6_9BACT)

HSP 1 Score: 176 bits (445), Expect = 3.660e-53
Identity = 85/120 (70.83%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKKKEKKS 120
            M+N+EVTFIVDPVLSGDEIKATAQ Y D IKKEG +I+H DEMGLR LAYPINRR SGVY+ +EFQ   G  I K+EL+ RRDERIMRFL + LDKYG+KYN DKR+G IGK KK+  K+
Sbjct:    1 MRNHEVTFIVDPVLSGDEIKATAQAYADLIKKEGAQIVHTDEMGLRQLAYPINRRTSGVYYCIEFQSDTGAFIPKMELSFRRDERIMRFLTVSLDKYGIKYNVDKRDGKIGKAKKRVSKA 120          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Match: A0A2C6CKF3_9BACT (30S ribosomal protein S6 n=1 Tax=Lewinellaceae bacterium SD302 TaxID=2014804 RepID=A0A2C6CKF3_9BACT)

HSP 1 Score: 173 bits (439), Expect = 2.620e-52
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 0
Query:    1 MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAYPINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVKYNEDKRNGLIGKVKK 115
            M+NYE TFIVDPVLSGDEIK TAQ YV+Q++KEG EI+ VDEMGLRTLAYPIN++NSGVY+ VE+  PNG  +   ELALRRDERIMRFL + LDKYGV+YN DKR+G I K KK
Sbjct:    1 MRNYETTFIVDPVLSGDEIKTTAQAYVEQLQKEGCEIVFVDEMGLRTLAYPINKKNSGVYYCVEYTAPNGAFLQTFELALRRDERIMRFLTVALDKYGVQYNADKRDGKISKAKK 115          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9635.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A846FUY6_9CYAN4.420e-74100.0030S ribosomal protein S6 n=1 Tax=Cyanothece sp. SI... [more]
A0A5C6RTN9_9BACT2.240e-5980.8730S ribosomal protein S6 n=1 Tax=Phaeodactylibacte... [more]
A0A2D0MYC4_9BACT2.830e-5780.0030S ribosomal protein S6 n=1 Tax=Flavilitoribacter... [more]
A0A098RZL8_9BACT3.300e-5778.4530S ribosomal protein S6 n=1 Tax=Phaeodactylibacte... [more]
A0A7Y5R6L7_9BACT1.720e-5674.7930S ribosomal protein S6 n=1 Tax=Saprospiraceae ba... [more]
A0A2T4XAF4_9BACT7.230e-5673.7730S ribosomal protein S6 n=1 Tax=Bacteroidetes bac... [more]
A0A3M0YWS9_9BACT4.130e-5575.8930S ribosomal protein S6 n=1 Tax=Bacteroidetes bac... [more]
UPI000365C7055.260e-5471.9030S ribosomal protein S6 n=1 Tax=Lewinella cohaere... [more]
A0A7Y2C2N6_9BACT3.660e-5370.8330S ribosomal protein S6 n=1 Tax=Saprospiraceae ba... [more]
A0A2C6CKF3_9BACT2.620e-5272.1730S ribosomal protein S6 n=1 Tax=Lewinellaceae bac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..104
e-value: 3.2E-27
score: 96.5
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 3..93
e-value: 1.2E-22
score: 80.0
IPR000529Ribosomal protein S6TIGRFAMTIGR00166TIGR00166coord: 1..95
e-value: 3.3E-20
score: 70.1
IPR000529Ribosomal protein S6PANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 2..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..140
NoneNo IPR availablePANTHERPTHR21011:SF128S RIBOSOMAL PROTEIN S6, MITOCHONDRIALcoord: 2..103
IPR020814Ribosomal protein S6, plastid/chloroplastHAMAPMF_00360Ribosomal_S6coord: 1..96
score: 17.72504
IPR020814Ribosomal protein S6, plastid/chloroplastCDDcd00473bS6coord: 3..94
e-value: 2.74224E-28
score: 99.4468
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9635contigD-mesarthrocarpus_Contig9635:3691..4302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9635.4.1mRNA_D-mesarthrocarpus_Contig9635.4.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9635 3691..4302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9635.4.1 ID=prot_D-mesarthrocarpus_Contig9635.4.1|Name=mRNA_D-mesarthrocarpus_Contig9635.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=185bp
MKNYEVTFIVDPVLSGDEIKATAQTYVDQIKKEGFEIIHVDEMGLRTLAY
PINRRNSGVYFTVEFQGPNGELIDKLELALRRDERIMRFLCIKLDKYGVK
YNEDKRNGLIGKVKKKEKKSRDNRGRGNRGNQRRGEKEAPAKTAAAPTPE
KEAPAKAAAPAPEKEAPAKTATPAPAKAAEKEEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR000529Ribosomal_S6
IPR020814Ribosomal_S6_plastid/chlpt
IPR035980Ribosomal_S6_sf