prot_D-mesarthrocarpus_Contig9601.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9601.2.1
Unique Nameprot_D-mesarthrocarpus_Contig9601.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length90
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9601.2.1 vs. uniprot
Match: D7FMG4_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG4_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.990e-19
Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 0 
Query:   27 ESRFNVIPDSFAPPPDPIKRLYQLQHGSLQALRRGSRQH---TKAPPVIPRQAASHILMGMMPS 87
             +RFNVIPD+FAPPPDPIKRLYQLQHGS +A+ RG R+H   + APPVIPR  ++ +L+G++ S
Sbjct:  197 RARFNVIPDAFAPPPDPIKRLYQLQHGSFKAMCRGDRRHGLHSGAPPVIPRHTSAQLLVGLLAS 260
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9601.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMG4_ECTSI3.990e-1962.50F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9601contigD-mesarthrocarpus_Contig9601:1751..2810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9601.2.1mRNA_D-mesarthrocarpus_Contig9601.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9601 1129..2810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9601.2.1 ID=prot_D-mesarthrocarpus_Contig9601.2.1|Name=mRNA_D-mesarthrocarpus_Contig9601.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=90bp
SPLVLCFFCLSFLIHACPLLFVLGGGESRFNVIPDSFAPPPDPIKRLYQL
QHGSLQALRRGSRQHTKAPPVIPRQAASHILMGMMPSPS*
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