prot_D-mesarthrocarpus_Contig959.10.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig959.10.1
Unique Nameprot_D-mesarthrocarpus_Contig959.10.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length333
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig959.10.1 vs. uniprot
Match: A0A6H5KTS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS5_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.960e-19
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 0 
Query:   13 LSMQVFGVTNPKKVEQRRLENATARTVEALVKRKLGSEALAEAIRDSLNRLHGREWHCVVGK--DFSANVRYWRGRMFFFQGQGLKVMVFKSALPPP 107
            L M    V N K  EQ R E AT   V+ L +  +  E LA +IR  LN +HG EWHCV GK   FS +VRYWRG+ F F+ +GL+++VF+SA P P
Sbjct:   17 LKMHSLDVGNKKTKEQMRFEQATKEAVQTLARLGMPPEELAGSIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAP 113
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BLAST of mRNA_D-mesarthrocarpus_Contig959.10.1 vs. uniprot
Match: C1LEA7_SCHJA (Dynein light chain n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=C1LEA7_SCHJA)

HSP 1 Score: 52.4 bits (124), Expect = 2.690e-5
Identity = 15/51 (29.41%), Postives = 36/51 (70.59%), Query Frame = 0 
Query:   52 LAEAIRDSLNRLHGREWHCVVGKDFSANVRYWRGRMFFFQGQGLKVMVFKS 102
            +A+ ++   + ++GR W C++GK+F +++ +    + +F G+GL+V++FK+
Sbjct:   38 MADYLKQKFDHIYGRNWQCIIGKNFESSITHLDNNLIYFYGKGLEVLLFKT 88
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig959.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTS5_9PHAE2.960e-1948.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1LEA7_SCHJA2.690e-529.41Dynein light chain n=1 Tax=Schistosoma japonicum T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 16..102
e-value: 1.3E-6
score: 38.0
coord: 135..227
e-value: 2.0E-4
score: 29.4
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 141..227
e-value: 1.3E-13
score: 51.1
coord: 27..102
e-value: 2.5E-12
score: 47.0
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 34..103
coord: 141..230
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10Protein Inhibitor Of Neuronal Nitric Oxide Synthase;coord: 129..227
e-value: 2.6E-11
score: 45.4
coord: 16..103
e-value: 3.8E-12
score: 48.0
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 138..227
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 34..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig959contigD-mesarthrocarpus_Contig959:14681..23693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig959.10.1mRNA_D-mesarthrocarpus_Contig959.10.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig959 14627..23965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig959.10.1 ID=prot_D-mesarthrocarpus_Contig959.10.1|Name=mRNA_D-mesarthrocarpus_Contig959.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=333bp
MTKSNASKAGPSLSMQVFGVTNPKKVEQRRLENATARTVEALVKRKLGSE
ALAEAIRDSLNRLHGREWHCVVGKDFSANVRYWRGRMFFFQGQGLKVMVF
KSALPPPPGSQGSTRTRAGPSLHEQAQRASEEEGRPRVSFKVIKSSMDKK
AEAELQELAYAATQATRKAGDITEVASALKASLTSSLGPGWHVVGQKSGE
WGCAVAHDDGFFMDFKLNGSRYVVWKHAQQPQLIGDIFTAKRLSSVCLFL
TMVLLIFMIRARTSCDPCCSSRATQSQRRQCQGDEERDCSEEDTATADKC
LGMSSLLFYVTCGFLAISTVLKLDYRKKYKLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf