mRNA_D-mesarthrocarpus_Contig959.10.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig959.10.1
Unique NamemRNA_D-mesarthrocarpus_Contig959.10.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig959.10.1 vs. uniprot
Match: A0A6H5KTS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS5_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 3.690e-19
Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 1
Query:   70 ASKAGPSLSMQVFGVTNPKKVEQRRLENATARTVEALVKRKLGSEALAEAIRDSLNRLHGREWHCVVGK--DFSANVRYWRGRMFFFQGQGLKVMVFKSALPPP 375
            A      L M    V N K  EQ R E AT   V+ L +  +  E LA +IR  LN +HG EWHCV GK   FS +VRYWRG+ F F+ +GL+++VF+SA P P
Sbjct:   10 AGTGAQDLKMHSLDVGNKKTKEQMRFEQATKEAVQTLARLGMPPEELAGSIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAP 113          
BLAST of mRNA_D-mesarthrocarpus_Contig959.10.1 vs. uniprot
Match: C1LEA7_SCHJA (Dynein light chain n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=C1LEA7_SCHJA)

HSP 1 Score: 52.4 bits (124), Expect = 3.730e-5
Identity = 15/51 (29.41%), Postives = 36/51 (70.59%), Query Frame = 1
Query:  208 LAEAIRDSLNRLHGREWHCVVGKDFSANVRYWRGRMFFFQGQGLKVMVFKS 360
            +A+ ++   + ++GR W C++GK+F +++ +    + +F G+GL+V++FK+
Sbjct:   38 MADYLKQKFDHIYGRNWQCIIGKNFESSITHLDNNLIYFYGKGLEVLLFKT 88          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig959.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTS5_9PHAE3.690e-1946.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1LEA7_SCHJA3.730e-529.41Dynein light chain n=1 Tax=Schistosoma japonicum T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig959contigD-mesarthrocarpus_Contig959:14627..23965 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo142540
PFAMsDynein_light
Model size1325
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons10
Evalue2.87e-09
EggNOG OGs2DXNJ@1|root,2S6SV@2759|Eukaryota,3Q7FY@4776|Peronosporales
Ec32 ortholog descriptionDynein light chain, type 1/2
Ec32 orthologEc-10_000870.1
DescriptionDynein light chain type 1
Cds size999
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig959.10.1prot_D-mesarthrocarpus_Contig959.10.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig959 14681..23693 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791113.0440497-UTR-D-mesarthrocarpus_Contig959:14626..146801680791113.0440497-UTR-D-mesarthrocarpus_Contig959:14626..14680Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig959 14627..14680 +
1680791113.194451-UTR-D-mesarthrocarpus_Contig959:23693..239651680791113.194451-UTR-D-mesarthrocarpus_Contig959:23693..23965Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig959 23694..23965 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791113.0569592-CDS-D-mesarthrocarpus_Contig959:14680..147691680791113.0569592-CDS-D-mesarthrocarpus_Contig959:14680..14769Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 14681..14769 +
1680791113.0691156-CDS-D-mesarthrocarpus_Contig959:15030..151301680791113.0691156-CDS-D-mesarthrocarpus_Contig959:15030..15130Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 15031..15130 +
1680791113.0791297-CDS-D-mesarthrocarpus_Contig959:15330..153871680791113.0791297-CDS-D-mesarthrocarpus_Contig959:15330..15387Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 15331..15387 +
1680791113.0915024-CDS-D-mesarthrocarpus_Contig959:16169..163391680791113.0915024-CDS-D-mesarthrocarpus_Contig959:16169..16339Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 16170..16339 +
1680791113.1012175-CDS-D-mesarthrocarpus_Contig959:18180..183041680791113.1012175-CDS-D-mesarthrocarpus_Contig959:18180..18304Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 18181..18304 +
1680791113.1149876-CDS-D-mesarthrocarpus_Contig959:19342..194501680791113.1149876-CDS-D-mesarthrocarpus_Contig959:19342..19450Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 19343..19450 +
1680791113.12637-CDS-D-mesarthrocarpus_Contig959:20041..201181680791113.12637-CDS-D-mesarthrocarpus_Contig959:20041..20118Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 20042..20118 +
1680791113.1391268-CDS-D-mesarthrocarpus_Contig959:21208..212921680791113.1391268-CDS-D-mesarthrocarpus_Contig959:21208..21292Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 21209..21292 +
1680791113.1581748-CDS-D-mesarthrocarpus_Contig959:22857..229631680791113.1581748-CDS-D-mesarthrocarpus_Contig959:22857..22963Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 22858..22963 +
1680791113.1773224-CDS-D-mesarthrocarpus_Contig959:23609..236931680791113.1773224-CDS-D-mesarthrocarpus_Contig959:23609..23693Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig959 23610..23693 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig959.10.1

>prot_D-mesarthrocarpus_Contig959.10.1 ID=prot_D-mesarthrocarpus_Contig959.10.1|Name=mRNA_D-mesarthrocarpus_Contig959.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=333bp
MTKSNASKAGPSLSMQVFGVTNPKKVEQRRLENATARTVEALVKRKLGSE
ALAEAIRDSLNRLHGREWHCVVGKDFSANVRYWRGRMFFFQGQGLKVMVF
KSALPPPPGSQGSTRTRAGPSLHEQAQRASEEEGRPRVSFKVIKSSMDKK
AEAELQELAYAATQATRKAGDITEVASALKASLTSSLGPGWHVVGQKSGE
WGCAVAHDDGFFMDFKLNGSRYVVWKHAQQPQLIGDIFTAKRLSSVCLFL
TMVLLIFMIRARTSCDPCCSSRATQSQRRQCQGDEERDCSEEDTATADKC
LGMSSLLFYVTCGFLAISTVLKLDYRKKYKLG*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig959:14627..23965+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig959.10.1 ID=mRNA_D-mesarthrocarpus_Contig959.10.1|Name=mRNA_D-mesarthrocarpus_Contig959.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=9339bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig959:14627..23965+ (Discosporangium mesarthrocarpum MT17_79)
GCAAGGACTTTTGCGCCAGCAACTTAAAAGTCATATATATACACAGAAGC AGTGATGACTAAATCTAATGCAAGCAAGGCTGGGCCAAGCCTTAGCATGC AAGTATTCGGAGTGACCAATCCCAAGAAAGTGGAGCAGCGAAGGTTTGTT TTCGAGGCTGCGGAAGGGGTGCGCTGACACTCCGTTTCGGTTGGGGGCAA GCTGAAGGACGGAACATGTCTTGTTGGTGCTAGTTGCAAAAGCGTGAAAC ATGAATTTCTGTCGATGACACTGTGCCATCCGTTATCTCGAAGCATCATA TGCGCTCAACCGCTGAAGAGCGAAAGAATTTCATGGTCGTCTGATGGACA GTGTGGAACCACACCTTCAACTACAACCCTTGCAACCAACGCCATCGTCT TAAGGCTCGAGAATGCTACAGCACGGACTGTGGAGGCTCTCGTCAAGCGA AAACTGGGGTCGGAAGCCTTGGCGGAGGCTATCCGAGACAGCCTCAATCG CCTGGTATGCTTGATTTCTCCAATGTAAACGGCATCAGAGTCGAACTTGT TTACCGCGTGTCGCAATTGTATCACAGCTGAGTGCAACGTGCTGAATTCA CCAACCTATTACAATGAATCGTATGCATCACCTTCCAAATTATTTCGCCA TACCATGCATGGACACTCGGACGATGCACCCTCGCATTTGGGGCGTGTCG ACAGCATGGAAGAGAGTGGCACTGCGTGGTGGGAAAGGATTTCAGCGCCA ACGTGCGATATGTAAGGAATCCCACTACCCCATGAACGAGTCATCATATG CACACACAAGTGCTGGCGTTCCAAGGGCTAAACATGTTTTGCGAAGTACA TAACTGTGACGTATCGGTGTGGTCTGGTTCCTTCTGTAAACCAGGCAAGG GGGACAGAGTTTGAAGTTGCTCTCTCCATTTACCACAGGGGCCGTAGCGC AATTGTTACTTGATTTTGTAGCAGCAGCAGAAGTAGTAGTAGTAGTAGTA GTATCACACATTACTTTGATCGTCTCAAATCGTGGTCAAAGGACAAAAAA TGAAAAATAAGAAAGGAAACGAAGACAAGAAGACGCCTGAACAAAGCTTA GCTATCAGGAACAGGAAATAGTCCTCTGCTTCTTTTTCTGACCCAGCTGG ACCACAAACCCATCTCCTGCCTAACCTACTACCATACCTCAACAAAGAGA TACCGATCTCACAAGCAGGACCTTGAAAGTTGAAGGATCCAAACCTGGCC ATGGAGGGTTGTTGCACTTTAATTTTTTTTTTTGTGGGGTTGAAGCAGAT TCACAGGACGCACACACCAACAAACGCACACCCATGTCTCCACAAAACAG GTCAACGACCAACATTGAACCGGCTTTTTTTCTTTTTTTCTGGGCCGTAA GAATGAAGGGCAGAGAGAAGGATTCCCGTGAAAGGTGTCACCCACCCTTC TTCCTCTTCCTCTTTGCTTCTCTTGTTATCTGCTTCTCTCCTTCCCGGCT TCTGTCCTTCTCTGATTCTCTCCTCTTGTTCTCTTGCACGCAGTGGCGCG GGCGGATGTTTTTTTTTCAGGGCCAAGGCCTCAAGGTGATGGTCTTCAAG TCTGCCCTGCCACCCCCCCCAGGATCACAAGGAAGTACACGTACCAGGGC TGGGCCAAGCCTTCATGAGCAAGCGCAAAGGGCATCCGAGGAGGAAGGCA GACCCCGTGTAAGGTGGGCCAAATGGCAGGCATTAGCTTGAGATGTGGTA TTTTGTAGGGGCTAGGGTTAAGGTTAGGGTAAGGGTCAGGGTTGGTACAA AGAAATAACAATAGTAGTAATAATACAGCCATAGGGTCAGGGCTAGGGTT AGTACAAAGCAATAATGATAATATTAGTAGTAATACAGCCACAGGGTTAG GGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTAACAAAGGTAGCATTTT CTGAGGAACATCTAGCGGCCGGACCCAGTGAAGAAAAGGCCAAGGTTATG ATCAGGTGCGTTTGTTTCCCATCCCCTGAATGTTGGCATTTCCATGATGG CAATCACAGCAATGACAGTCATTGCCATGATTGCATGCACGGTGATGGCA TGCACAGTTATGGCAGCCATAGCCATGATGGCAGTCACAGTGATGGCAGC CATTGCTTGGTTGTGCCCTTTTATGTCCTTTTCTTCCTGCTAGGCTTTTT GGTGTAGCATGCCCACAGAGTCTCTTCCACACCGTGTGAAGGCGTTTTTG CACACATGTGGAAGTATTCAGCTACCCCCCACCCCAATCCAACACTCTTT GGTTCTTGTGCTCCACCGGTAAGGCATCTGGTTCAAAGGCTGCCCCCCTG CTTCTGAGCTTCTTGTCTCCTCCCAGATGCGCCCACTCAAAGAAGATCTT TGAAGGAGATGGAGCCCCGGTACAAAATACTACAGAAAGCTTTTAGTTGA AAGAAAGCATGTCAGAACCTCGGTGTTGTTTACTGAAATAAAAGTTACCA AGGTGTAGCATGGTGAGTGCTACCGCAGAAATCAAACGATGTGGTATGGT ATGGTGCAGTAAGGTACTTCCATTTTTTGACAGTATGATCATGGATGGGC CAGTAGGATGAGTTGCTGCGCTTTCTGATCATCAGCCTCACTGTAAAGAA AAGAAAAATGAAAAAACTACCACTCCCACATGGTATCATATGACCAGGTC CAGTGTTGCCAGGCACAAAGCAGGTGGCGTTTGTTTACAGGGCCTCGTGC ATTTTCGCGGTGCATTCAAACACTTTTTTTGATGCCTTTTTTTTAATGCC ATTTTCTTTTTTTTCTTTTTTTCACCCTGTTCGGTGGGAAAAAAAATAAA GATACACAGTGCACAGGCTGGGACTTGAGCCCTGTGTACAGGGGTAAGGA GCGGCAGGGAACAGTAAGGAGTGGTAGTTGTGATTTTTGGATGGTATGGT ATGGTACAGTAGGTCCCGCCGTAGCAGAAACTCAGCCGGTGTGGTATGGT ACAGTTGAGCGATTCGGCCCTTACTAACCCTAACCCTAACCCTAACCCTA AGTATGGTACAGTTGAGCAATTCGGCCCTTACTAACCCTAACCCTAACCC TAACCCTAACCCTAACCCTAACCCTAACCATAGCCTTAAGAAAAGGTCAA TCGAAAACAAGAAGAATGGTTCACTGCACAGCATAACTCTAGACTCAGAG CCAGGACCACTGTTTGGGCCTCAGACATTGCTTCCGGGGGATTTTTGTTA TGTATAAGTGGTGGCAAGTGGGAATATATGCGCACAAAACTGCTTAAGAA AGAAAATTGAGAAACAAAATTTGTGTTTATTAATGTCAACAGCAAGGAAC AAGAACTGACCGTAACCCTAACCCTAGCCCCAGCCCGTATCCTTCTGTCA GTAGGCAGGGGAGAGGACTCATCTCCCCCTGGACCTTGGGTATTCCCAAA CCCTATTTGCAGTATGTGGCCTTATGCCACTGGTGTTCAAAAAGAGTACC TCATGCCCCTGACCCACCCTCTTCCCTGCTCCCCCTGACCCACCCCATCT ACAGCTTCAAGGTGATCAAGTCCTCCATGGATAAGAAGGCTGAAGCAGAG TTGCAGGAGCTGGCTTATGCAGCCACCCAAGCCACGAGGAAGGCTGGAGA CATTACTGAGGTGGCCTCTGCCCTGAAGGTGCCCACACTACTCCACAGGG CGTAGTGGATGCCCAGCAGCTGAGAGGCCTGAGATTTTTTTTTTGGGGGG GGGGGGAGGAAAGGAACAGAAGAAGAGAGCACCCTGGACGCTTGAGTGCC TGCCCCACCTTCACCTCCTCCCTTTGATTTCCACTTTTTGTTTTTTGTTG TTTTTGTTTTTTACCCCGGGTTAGGGTTAGGGTTAGGTTTAAGGGGGTGT TGAGGTGTTCATGCTTCACGCGACATGGCACAACAGCACTGCCCTGCTGT AGAGTAGAAGATTCTCTGTGGTAAATCTGCAGTAAAGAGTGCGACATGCT GCCAGGTTACAGCAGTATCTTCACGCCTGCCAGTACCTCATTCCAGATAC TCCGATGCAGTATGTTGAAGTATTGGCAGCAATCCATGTTGGAGCTCTTG CACATTGGAAGGGGGGGGGGTAGCTAGCTAACCCGCATGTTGTTTTTTTT TCTGTGCTTGCGGGCACTTGTCCATCATGTGCCCAGACAGAAAGAACACA ACAGAACAGATCCTGGAAGGTGGTCGTGTGTTGTGGGCCTGTGCCGTGGG TTGTGAGTGCCCCACCCAGGCCAGGGGATGAACAGACTCAGTGCTCTGGA CGGGGAGAAGGGTCTCTCCTAAGTGCTCTGAAGCCTTCCCTGCTCGACGT CATTGGTCAGCAGTGAAGGGTTTGCGTTGCCTCAATCCAAATGCCCTGAC CCTGAGGGGGACAGACAGTATGTTTCCTCTGTAACGGGGGACAGCTCTGA GGAAGTGGCAACTCGAAGACACCCTCGAAAGATACTGCAAAGATACTGCA AAGATACTGCAAAGATACTGCAAAGATGCTACCAAAGATACTACCAATGA TACAATCAAAGATACTACGGTACTGTACCTTGTTGTCAACGCCGACGAAA TGCTAACCCTAACCCTAACCACACCTCACCCACATTCTTCACGGACATGC ATGTATGTATCTATACATGTGTGCATGTCCGTATGCTGTTGTTGATGTGC CTTACCTGTCTTCCAGGCATCCTTGACCTCCTCCCTAGGGCCAGGGTGGC ATGTTGTGGGCCAGAAGTCGGGTGAATGGGGGTGTGCCGTGGCCCACGAT GACGGGTTCTTCATGGACTTTAAGGTGAGGGCTAGCCCTAACCCAAACTC TAACCCTAAGGTGAGGTGGGTCCATTAGAACTCCATTGGGGAAGTGAATG GTTTTTTGTTTCTCAGTTCCTGGGCAGTTTCTTTTTATTGTGTTGGATAT GAAGAGTAGGGCACTACCACACCCTGACCCTAACCTTAATGCTAACCCAA ATGTGAATGGCAGAGCTCTATGGCACCACCACACCCTAGCCATAACCTTA ATCCTAGCCTAACTGTGAAGGGTAGAGCTCTAAGGCACCACCACACCCTA ACTCTATCCTTAGTCCTAACCCCAATGTGAAGAGTAGGGCTCTATGGCAT GACCACACCCTAGCTGTAACCATAGTCCTAACCCAAGTGTGAAGGTAGTG TTCTAAGGCACCACCAAACCCTAGCTATAACCGTATTCCTAACCCAAATG TGAATGTAGGGTTCTAAGGCACCACCAAACCCTAACCCAAACCATAAACC AACCCCTAATGCGAACAGTAGAGCTCTAAGGCACCACCACACCCTAACCT TGATCCTAAACGTAACCTGAACCGCACCCTGAGCCTTACCCATGTTTTGC TCCATCCTGTGGAAGTTGAACGGCAGTCGATATGTGGTGTGGAAGCACGC ACAACAGCCACAGCTGATAGGGGACATCTTCACCGCCAAGAGGTATGAGG TGTAGAAATAGTGTTGGTGGTGGTCATGGTGGTATTGGTAGTAGTAGAGC ACTAGTTGTTGTGGCAGGGGTGGCAGTGGTAGTGGTTTAGTACCGTTTTG GTGGTGGCAGGGGTGGTAGTGGGTAGTAGTTTAGTACCCTTTTGGTGGTG GTGTTTGGATACTGGCGATTGACGGTAGGCTGCAAAAAAAACGCCTCCCT AGAGTCTACTGGCCGTTGCCATTGATATCCACCGCACTTCAATAGTACTT CTGAGTTATTGCTTGTTGTCACCACCATCAGTGCAATAGTGCCTAGGGTT AAGGCTAGGATCATGCACGCCTGTCGCTTATTTTGCTTTATCCCGTTACT TGTGGCATGTTTGCACCTGGTTCCAGGCCGGCACCCCACCCCACACGAGG GAGTAGGCAATGATGCAGAAATTAGAAGCAACTCCAGCCTGTGACTGTAC TTTCGGCAGCAATCCTCACCTCCCCTGGGGTCCCTTCAGACGTACCGCCC TGCCCCCCCCCCTCGTGCCCTGGTCCCCCCCTAGCCATGAGGACTAGGCC CTTCCGGACTCGGGAGTTTCAAATCCTAACCCTAAGGGGGTTTCCGGATG TGGCTAAGTGTGTGATCTGTCCCCGCCCTTAACCATAACCGTAACCTTAA CCTTAACCTAACCACAGGTATGAGTGTCAGACGAATACTGTTTACAAGAG ACACCCTGGTCATGACCCTAGAGCTCCAACCCTAATGCTGACCCTAATCC ACGGATTCAAGAGAAAGTGAGCACCTTTTTTTTTGCAGTGACACATCCAA ATTTGTCCTTACTCCGTCATTCCGGAGTATTTGTGAGCGCGTCTTGTGCC TCGTACCCCCTCCCTCCTTCGCCTGTGGGCATCTAACCCTAACCCTAACC CTAACCCTAACCCTAACCCTAGCCCTAACCCTAACCCTAACCCTAACCCT AACCCTAACCCTAACCCCCCGTGCCTTGCTCAGACTTTATGCGCCCAAGC CCTAGCCCTAAGCTGAACCCGAACCCTAACCCTAACCAAAACCGTGACCA TATTTTTTATTTCTCATCTCCGCCACCTCCAGGCTGTCCTCCGTTTGTTT GTTCCTGACCATGGTGTTGCTGATCTTCATGATCAGGGCACGTACCTCAT GTGACCCTTGCTGCAGGTAACGTAATAAGAAGACGTCTTTTGTTTGACTA TATTTGGGTATTTACCGCAGAAGAATCCCACGCAAGATGGAGCAAGGCGG CTTGCCTTGTGCCTAACAAACTGGTCTCTTTTCCCTGCCTTTTTCATTGC ACCTGTCAATCCTGTTGCCAGAGGCATCCTGTAGCAAGGTATTGTCCAGC CCTGGGGAAATGTCGTGAGCTCTAGTTGAGGTAGAGTGCAGGGCCACTTC GAAGCACAGCGTTTGCCCACATTTCCGAGACCGTTGCAAATAGGGCATGC TTTCCTTTATGGTATTGACTGTGGAGCTTTTGTTTCCCTGAAGGGCGTTC AGTTTTGAAATGATGGAGAGTTTTTTCTGTAAACGACGGGAGTATTGTAT CGCACACTACAGCAGACGTTTAGTATAGAAGTGTTGATTTCTGGAACTTG TTGAACTCCTCCCTTCAACCGCTTGGTTGAAACCCTAACCCTAGAATTCT CAACCAGCAGTTCGAGTAACGGTGTGTCCACAGTTTGATGAAGTGTGCAG TCATTGAGGAGCAGTCGGCATAAAGAGGGGGCATAAATACTGGTAGTGTG GGGTCTTGAATATCATGTTGGTTACCGATATGGTGATGTTTTCTCAACCA ACATCAAGCTCACAAGACTCCGACTCAAACGGGTATATCTACCACTGCTG GTAGGTCAACTCATCAAAATGTCATGAGCTTGCGGAGACCAGCGCACCCC CTCCAACCCTGTGGTTGGTATGTGAGGTGCTGCTGCTTGGTACCCCTGAT CCCCCGCCAGTGGCGACCACATTGCAATCATTTGAGCTTGTGCTCAAGAA AGATCTCGCTTTCTTTTAGCGTGGGTCTTGGGTCTGTAAATCTATGGTCT ATGGTGTATTGATGCCCCCCTACCCTGAAACACGATCTACCAGGCCCGTA GTGTGCACTGGTTTGTGCGAAATGCTGGGTATGCTGGGTTTTAGTTCAGA ATATGCCACCGGGGTTCTTTTTTCAAAGCGACTTGTTGTGATGGTGGCCT CTCAGAGGCCATGATAGGGGGGTGTGTAGCACTCAGCGCCACCCAATTTT TTGGTGAGACGTCTAATAGTGTGGTCTGCACGAACAACCCCACTTTTTTA ACAGTGGTAGTGGGACTCATACCTGTGGAGGACTGAGTGATCCCACGAAA CGGTACCAAGCAGGACTGCACAGAGGGTCTCGTAACACTGGATACAGCGT ATTCCGACTATGCACAGCACTTCAGATACACAAGTTTTTTTTTCCCCACC TTTTTCGCTCATTGTGCTGTGCTGTATAAGCTATGCAGAAGTTTTATCTT GCCACCTTCTCTCACGTGGGTGTGCTGTACTTTTAGAATGCTCCGCACTT CTTCCAAAGGGAGTGCTTCATGCTCCAGTGTGTAAGAGCACTTCCGAGTG TGGGCTGACTGATCTGTCGCCCTAACCCTAAACCCTAAACCCTAAACCCT AACCCTCATTCTAACCCCCAACCCTTAACCCAAGCCTGAGCAGTCTTCCG CCCCCCTTACGCACGTGCCCTGTGGCACCAGCTCCAGGGCAACACAGTCC CAGCGGCGCCAGTGTCAAGGCGACGAAGAAAGAGATTGCTCCGAGGAGGA CACAGCCACCGCTGACAAATGCCTTGGCATGTCATCGGTGAGTTGTTTTC CTCTGTATTTTTACCCGGGAGAGGGGCGCAATCCTTTGTCTCATTGCGCC CCCAGCCAGCTTCTATTATTGTTTTTTCTCCGCGCGGACAACTCACAGCA GCTTGCTACAAGCTAAGGCCCTCAGCTTGGAGCGGAACACCCGCAGCCAA CTCACTCATGCCCTCGAGAAAAACATCAAAACCGGATTAAAAGGGAAGAA GGGGCATTTTTTTCTAGTATTCTTTTTCGCCTATGGTAACTTGACCACAG TACAGAACGGTAGTGAGTGCCTTGTGTTGTAGAATCAGAACTGGTTTAGG AAGAAGGTGCGGGAGTGGACGTCCATTTATTGATGGTCACCACTTGGAAG TACACATTGTGGAGCCTGACGGATTCTCACAGCTTACAGTAGCGCGGGGT TTTCCTCCATGCTGAGGAGGCCTGAGCCACTAATGTACACAATAGTCACT GACCCTAACCCTGCCATGCATATTCCCCAACATCACTTGTATCACCTGCT CACCTTTTGTTTGTGCCCGTCCCCCACCATGTGCCATGCCTTACCGTCTC CTTTGCTCAACTTGGGATATGCCCTGCCCCTGCCCGTGCACCTACCTGCC CCTCCCTGCCACTGCAAAAAAAATGTAAAAAAGCTGCTCTTCTACGTTAC CTGCGGTTTCCTGGCGATCAGCACAGTGCTGAAGCTGGACTACAGGAAGA AATACAAGCTGGGATGACCTACTGCTGTACTTTACTCTCTTCCCTTGGAA GGGCTTTGTAATCACAGTGAATCACACTTTCAAAAGAAAAGAAACCAAAC GTCCACAGAATTGCTCGCATAGCGGGTCTGCTGCAGTGATCAAAGCCCAG GCAGAAAAAGGCACACGCTGGACACGTGACGCCAGCCACAGGGGGGGCTG CCTTGAATGCACCGAGACCAGTCAGTAGTCAGTCGTTATGAGATGCGCTT TTCCTCCAGCGAATGTTCATCATCAGGGTACCCCAGCTC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig959:14627..23965+

>mRNA_D-mesarthrocarpus_Contig959.10.1 ID=mRNA_D-mesarthrocarpus_Contig959.10.1|Name=mRNA_D-mesarthrocarpus_Contig959.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=999bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig959:14627..23965+ (Discosporangium mesarthrocarpum MT17_79)
ATGACTAAATCTAATGCAAGCAAGGCTGGGCCAAGCCTTAGCATGCAAGT
ATTCGGAGTGACCAATCCCAAGAAAGTGGAGCAGCGAAGGCTCGAGAATG
CTACAGCACGGACTGTGGAGGCTCTCGTCAAGCGAAAACTGGGGTCGGAA
GCCTTGGCGGAGGCTATCCGAGACAGCCTCAATCGCCTGCATGGAAGAGA
GTGGCACTGCGTGGTGGGAAAGGATTTCAGCGCCAACGTGCGATATTGGC
GCGGGCGGATGTTTTTTTTTCAGGGCCAAGGCCTCAAGGTGATGGTCTTC
AAGTCTGCCCTGCCACCCCCCCCAGGATCACAAGGAAGTACACGTACCAG
GGCTGGGCCAAGCCTTCATGAGCAAGCGCAAAGGGCATCCGAGGAGGAAG
GCAGACCCCGTGTAAGCTTCAAGGTGATCAAGTCCTCCATGGATAAGAAG
GCTGAAGCAGAGTTGCAGGAGCTGGCTTATGCAGCCACCCAAGCCACGAG
GAAGGCTGGAGACATTACTGAGGTGGCCTCTGCCCTGAAGGCATCCTTGA
CCTCCTCCCTAGGGCCAGGGTGGCATGTTGTGGGCCAGAAGTCGGGTGAA
TGGGGGTGTGCCGTGGCCCACGATGACGGGTTCTTCATGGACTTTAAGTT
GAACGGCAGTCGATATGTGGTGTGGAAGCACGCACAACAGCCACAGCTGA
TAGGGGACATCTTCACCGCCAAGAGGCTGTCCTCCGTTTGTTTGTTCCTG
ACCATGGTGTTGCTGATCTTCATGATCAGGGCACGTACCTCATGTGACCC
TTGCTGCAGCTCCAGGGCAACACAGTCCCAGCGGCGCCAGTGTCAAGGCG
ACGAAGAAAGAGATTGCTCCGAGGAGGACACAGCCACCGCTGACAAATGC
CTTGGCATGTCATCGCTGCTCTTCTACGTTACCTGCGGTTTCCTGGCGAT
CAGCACAGTGCTGAAGCTGGACTACAGGAAGAAATACAAGCTGGGATGA
back to top