prot_D-mesarthrocarpus_Contig9565.1.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9565.1.2
Unique Nameprot_D-mesarthrocarpus_Contig9565.1.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length301
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9565.1.2 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.620e-15
Identity = 60/144 (41.67%), Postives = 74/144 (51.39%), Query Frame = 0 
Query:   19 VGRYTAVPEAAVFVLRVR----GGAEGKKG------------LDEEDLVHIQHRDTSLFLSVSPTAPQDTPRLGHGGDALGMNSHHPPGGRLALTLAKWPQTTEYWRLKRAQSSELKATRHILTALTQLVVTLDTLLEEVTIQP 146
            V ++ AVP A VFV+R R     GAEG  G            L  EDLVH+QH++T LFLS  P   ++T +                 G + LT+ K P TTEYWRL RA   E  AT HILTA  QL  +LD+LL E+   P
Sbjct:  649 VDQHAAVPAATVFVIRPRRTAAAGAEGLVGPAAAEGAGADRWLGPEDLVHLQHKNTGLFLSALPL--ENTAK-----------------GGIGLTMVKSPLTTEYWRLARAPERERMATNHILTAQAQLKASLDSLLVEIEKMP 773
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9565.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMW8_ECTSI1.620e-1541.67Inositol triphosphate receptor (IP3R)/ Ryanodine r... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9565contigD-mesarthrocarpus_Contig9565:1986..4775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9565.1.2mRNA_D-mesarthrocarpus_Contig9565.1.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9565 1984..4775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9565.1.2 ID=prot_D-mesarthrocarpus_Contig9565.1.2|Name=mRNA_D-mesarthrocarpus_Contig9565.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=301bp
EPLIDPDFGSGWVVTTAHVGRYTAVPEAAVFVLRVRGGAEGKKGLDEEDL
VHIQHRDTSLFLSVSPTAPQDTPRLGHGGDALGMNSHHPPGGRLALTLAK
WPQTTEYWRLKRAQSSELKATRHILTALTQLVVTLDTLLEEVTIQPDAPP
QFASRPVHTMQAAMMLPLPPATAATTASPMMPLSVPRPPGPPATEPSPAV
DPPQVEEPGLSPPMPKGTRPPPPKRVPPLAPGQQQHHRPLATGRQHLIAR
VSENSLFQATLAVSHFQITLGQGADWWQEDVESGYKEGSYGPGAGGGRRV
R
back to top