prot_D-mesarthrocarpus_Contig9549.3.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9549.3.2
Unique Nameprot_D-mesarthrocarpus_Contig9549.3.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length291
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9549.3.2 vs. uniprot
Match: A0A6H5K431_9PHAE (GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K431_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.270e-48
Identity = 117/289 (40.48%), Postives = 149/289 (51.56%), Query Frame = 0 
Query:    3 LRLIALALASPRRIPGVVEATWSLPC---RWHSSNPGLRGGPVE---ATRCCRLVLGCRGGAEGDELTSLLQKGWQKLESGDHDGAVSSYDLAAGLDPSSAAARCGLGRALIRKGRLEEGFESLLIAFGQDSLCPGVKDGFREYYRKEIEINPSNIDAYEGLAALCVDSGQPQEAAECYRSCLDLTSPTPPDGTDTDIAPPPPASEVGQGTDKGPRSSILRDDTRAGFSAAAAAAVAEEVDGSLGPTLRRDRWSVALFKCRAALCDWTDWEASSNDLRAAVCRAGWDTR 285
            +RL  L L  P   P      W  PC     H+  P +RG  +     T          G   G     LL  G Q+ ++GD + AV  ++ AA   P SA  +  LGRAL+R GR +EGF  L+ AFG DSLCPGVKDGFREYYR EIE +P+N+D +EGLAALCVDSG P+EAA  YR  L L                  A+   +G+ +      +R  + +  SAA   +  E  + +     R+DRWSVALFKC A+LC W DW   +  LR AV R GW  R
Sbjct:    1 MRLAPLCLVPPSLTP-TAAVVW--PCVNNHRHACAPTVRGTTIAHRLRTTYAAAAAAQDGPDNGANTERLLALGRQQTQAGDLESAVYQFERAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIEADPNNVDLHEGLAALCVDSGNPEEAAALYRRLLGLH-----------------ATATAEGSGR------IRSFSSSNPSAAGDLSSKETTEAAAAA--RKDRWSVALFKCNASLCQWDDWNGEALALRTAVRRRGWRRR 261
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BLAST of mRNA_D-mesarthrocarpus_Contig9549.3.2 vs. uniprot
Match: D7FH04_ECTSI (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH04_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 1.710e-46
Identity = 106/235 (45.11%), Postives = 128/235 (54.47%), Query Frame = 0 
Query:   45 TRCCRLVLGCRGGAEGDELTSLLQKGWQKLESGDHDGAVSSYDLAAGLDPSSAAARCGLGRALIRKGRLEEGFESLLIAFGQDSLCPGVKDGFREYYRKEIEINPSNIDAYEGLAALCVDSGQPQEAAECYRSCLDLTSPTPPDGTDTDIAPPPPASEVGQGTDKGPRSSILRDDTRAGFSAAAAAAVAEEVDGSLGPTLRRDRWSVALFKCRAALCDWTDWEASSNDLRAAVCR 279
            T C        G   G     LL  G Q  ++GD + AV  ++ AA   P SA  +  LGRAL+R GR +EGF  L+ AFG DSLCPGVKDGFREYYR EIE +P+NID +EGLAALCVDSG P+EAA  YR CL L                  A+   +G  + P  S   D + AG  ++  A  A           R+DRWSVALFKC A+LC W DW   +  LR AV R
Sbjct:   46 TTCAAAAAAQDGPDNGANTERLLALGRQHTQAGDLESAVYQFEQAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIEADPNNIDLHEGLAALCVDSGNPEEAAALYRRCLGLH-----------------AAASAEGGGRTPSFSSS-DPSAAGHLSSKEATEA-------AAAARKDRWSVALFKCNASLCQWDDWNGEALTLRTAVRR 255
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9549.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K431_9PHAE2.270e-4840.48GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FH04_ECTSI1.710e-4645.11UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 97..130
e-value: 180.0
score: 3.9
coord: 152..185
e-value: 14.0
score: 13.8
coord: 63..96
e-value: 63.0
score: 8.0
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 153..181
e-value: 0.16
score: 12.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 58..187
e-value: 1.1E-17
score: 66.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 43..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9549contigD-mesarthrocarpus_Contig9549:3343..4721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9549.3.2mRNA_D-mesarthrocarpus_Contig9549.3.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9549 3259..4721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9549.3.2 ID=prot_D-mesarthrocarpus_Contig9549.3.2|Name=mRNA_D-mesarthrocarpus_Contig9549.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=291bp
MLLRLIALALASPRRIPGVVEATWSLPCRWHSSNPGLRGGPVEATRCCRL
VLGCRGGAEGDELTSLLQKGWQKLESGDHDGAVSSYDLAAGLDPSSAAAR
CGLGRALIRKGRLEEGFESLLIAFGQDSLCPGVKDGFREYYRKEIEINPS
NIDAYEGLAALCVDSGQPQEAAECYRSCLDLTSPTPPDGTDTDIAPPPPA
SEVGQGTDKGPRSSILRDDTRAGFSAAAAAAVAEEVDGSLGPTLRRDRWS
VALFKCRAALCDWTDWEASSNDLRAAVCRAGWDTREPSITG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf