prot_D-mesarthrocarpus_Contig944.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig944.1.1
Unique Nameprot_D-mesarthrocarpus_Contig944.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length42
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5KN04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN04_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 3.790e-6
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPF L  D S DG    LGQE  DG +RP+ F+SRAT+
Sbjct:  204 GSRPFHLYCDASRDGFGGTLGQEQPDGFIRPIVFISRATL 243          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPFRL  D S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  568 GSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATL 607          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5KIF5_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF5_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPFRL  D S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  740 GSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATL 779          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPFRL  D S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  103 GSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATL 142          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5K248_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K248_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 23/40 (57.50%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPFRL  D S DG    L QE  DG VRP+ F+SRAT+
Sbjct:  483 GSRPFRLYYDASKDGFGGTLEQEQPDGSVRPIVFVSRATL 522          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5JUD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUD0_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 1.770e-5
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPF L ID S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  248 GSRPFHLHIDASHDGFGGTLEQEQPDGSIRPIVFISRATL 287          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: W6NGW3_HAECO (Integrase domain containing protein n=2 Tax=Haemonchus contortus TaxID=6289 RepID=W6NGW3_HAECO)

HSP 1 Score: 48.1 bits (113), Expect = 3.430e-5
Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSR 37
            G +PF++ +D +T+GL AVL QEG DG + P+YF S+
Sbjct:   63 GRKPFKIHLDANTEGLGAVLSQEGDDGFLHPIYFASK 99          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5JFL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL9_9PHAE)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 21/40 (52.50%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPF L  D S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  463 GSRPFHLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATL 502          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5J9N0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N0_9PHAE)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 21/40 (52.50%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPF L  D S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  636 GSRPFHLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATL 675          
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Match: A0A6H5JSG5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG5_9PHAE)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 21/40 (52.50%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    1 GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATI 40
            G RPF L  D S DG    L QE  DG +RP+ F+SRAT+
Sbjct:  279 GSRPFHLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATL 318          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig944.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KN04_9PHAE3.790e-655.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUZ4_9PHAE1.330e-555.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIF5_9PHAE1.330e-555.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KAD8_9PHAE1.340e-555.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K248_9PHAE1.340e-557.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUD0_9PHAE1.770e-555.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W6NGW3_HAECO3.430e-551.35Integrase domain containing protein n=2 Tax=Haemon... [more]
A0A6H5JFL9_9PHAE6.410e-552.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J9N0_9PHAE6.410e-552.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JSG5_9PHAE6.410e-552.50Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 3..38
e-value: 5.1E-6
score: 26.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig944contigD-mesarthrocarpus_Contig944:2075..2200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig944.1.1mRNA_D-mesarthrocarpus_Contig944.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig944 2075..2200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig944.1.1 ID=prot_D-mesarthrocarpus_Contig944.1.1|Name=mRNA_D-mesarthrocarpus_Contig944.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=42bp
GGRPFRLTIDESTDGLEAVLGQEGKDGVVRPLYFLSRATIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH