prot_D-mesarthrocarpus_Contig9355.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-mesarthrocarpus_Contig9355.1.1
Unique Name	prot_D-mesarthrocarpus_Contig9355.1.1
Type	polypeptide
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length	133

Homology

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: W7TR87_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR87_9STRA)

HSP 1 Score: 168 bits (425), Expect = 7.870e-51
Identity = 79/126 (62.70%), Postives = 105/126 (83.33%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEAT-GSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G G QTRSFQYV DLV GL+ LMN  Y+ PVN+GNP+EY+VK+FA++V+E    + SQ+VHL ATKDDP KR+PDI++AK++LGWEP V+VR+G+  TI+YFR+ELE TGEITPTGP+A++P
Sbjct:   37 ITIYGKGRQTRSFQYVDDLVSGLMKLMNSDYELPVNLGNPDEYSVKDFALLVRELVRNTDSQIVHLPATKDDPAKRKPDITIAKKELGWEPTVSVRDGLAKTIEYFRKELEETGEITPTGPEAARP 162

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: W7TNW1_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNW1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.100e-50
Identity = 81/126 (64.29%), Postives = 98/126 (77.78%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKE-ATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G+G QTRSFQYV DLV GL  LMN  Y  PVN+GNPEEYTVK+FA++VKE   GSPS +VH+ ATKDDP KR+PDI +A + LGW+PRV VREG+  T+ YFR ELE TGEI PTGP A++P
Sbjct:   47 ITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRP 172

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A6H5KWP6_9PHAE (UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWP6_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.330e-50
Identity = 82/125 (65.60%), Postives = 104/125 (83.20%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + GDG QTRSFQYV DLVRGL+ALMN  Y  PVNIGNP+EYTVK+FA ++K +T S S+++ ++ TKDDPNKR+PDI+LAK++L WEP VAV++G+  TIKYFR EL++TGEI PTGP ASKP
Sbjct:  348 ITIYGDGSQTRSFQYVDDLVRGLIALMNSNYSGPVNIGNPDEYTVKDFAELIKSSTESTSKIIFMDGTKDDPNKRKPDITLAKKELRWEPTVAVKDGLVETIKYFRGELKKTGEIIPTGPDASKP 472

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A1E7EJ50_9STRA (UDP-glucuronate decarboxylase n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJ50_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.100e-49
Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 0

Query:    6 GDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            G+G QTRSFQYV+DLV GL ALMN  YD PVN+GNP+E+T+KEFA  VK+ T S S ++ LE T+DDPNKR+PDISLAKEKLGWEPRV V+EG+  TI YF+Q L+  GEI PTGP ASKP
Sbjct:  203 GEGDQTRSFQYVSDLVDGLHALMNGDYDGPVNLGNPDEFTMKEFAQYVKKLTKSESDIIFLEKTQDDPNKRKPDISLAKEKLGWEPRVTVKEGLSKTITYFQQVLDEAGEIIPTGPGASKP 323

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A7S2HWZ1_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HWZ1_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.240e-48
Identity = 77/125 (61.60%), Postives = 98/125 (78.40%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G GLQTRSFQYV DLV GL ALMN  YD PVN+GNP+EYTVK+FA  +KE T S S++  L  T+DDPN+R+PDI++AK+ LGWEP+V VR+G+E TI YFR+ L+  GEI PTGP+ +KP
Sbjct:  104 ITIYGPGLQTRSFQYVDDLVEGLHALMNSDYDLPVNLGNPDEYTVKDFAEYIKEMTESKSEIKFLPKTEDDPNQRKPDITVAKKNLGWEPKVEVRDGLERTISYFRRVLDDAGEIIPTGPEGAKP 228

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A4D9D2V9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2V9_9STRA)

HSP 1 Score: 169 bits (429), Expect = 6.870e-48
Identity = 82/126 (65.08%), Postives = 98/126 (77.78%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKE-ATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G+G QTRSFQYV DLV GL  LMN  Y  PVN+GNPEEYTVKEFA++VKE   GSPS +VH+ ATKDDP KR+PDI +A + LGW+PRV VREG+  T+ YFR ELE TGEI PTGP A++P
Sbjct:  344 ITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKEFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIQVATDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRP 469

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: K8YTX9_NANGC (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTX9_NANGC)

HSP 1 Score: 168 bits (425), Expect = 3.880e-47
Identity = 81/126 (64.29%), Postives = 98/126 (77.78%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKE-ATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G+G QTRSFQYV DLV GL  LMN  Y  PVN+GNPEEYTVK+FA++VKE   GSPS +VH+ ATKDDP KR+PDI +A + LGW+PRV VREG+  T+ YFR ELE TGEI PTGP A++P
Sbjct:  361 ITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRP 486

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A812Q9G5_SYMMI (UDP-glucuronate decarboxylase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Q9G5_SYMMI)

HSP 1 Score: 157 bits (397), Expect = 4.470e-47
Identity = 74/125 (59.20%), Postives = 96/125 (76.80%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G G QTRSFQ+V DLV GL+ALMN  Y QPVN+GNP+EY+VK+FA  +KE T S S +  L AT+DDP +R+PDI+ AKE++GW P+V VR G+   I+YFR+ELE +GEI PTGP AS+P
Sbjct:    7 ITIYGTGSQTRSFQFVDDLVNGLMALMNGNYSQPVNLGNPDEYSVKDFAAFIKELTKSNSTIKFLPATQDDPRQRKPDITTAKERIGWSPQVPVRVGLAKAIEYFRKELENSGEIIPTGPDASRP 131

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A4D9CY17_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY17_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.200e-46
Identity = 79/126 (62.70%), Postives = 104/126 (82.54%), Query Frame = 0

Query:    2 VRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEATGS-PSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            + + G G QTRSFQYV DLV GL+ LMN  Y+ PVN+GNP+EY+VK+FA++V+E   +  SQ+VHL ATKDDP KR+PDI+ AK++LGWEP V+VR+G+  TI+YFR+ELE TGEITPTGP+A++P
Sbjct:  356 ITIYGKGRQTRSFQYVDDLVSGLMKLMNSDYELPVNLGNPDEYSVKDFALLVRELVRNMDSQIVHLPATKDDPAKRKPDITTAKKELGWEPTVSVRDGLAKTIEYFRKELEETGEITPTGPEAARP 481

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BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Match: A0A7S2FJ01_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJ01_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.270e-46
Identity = 74/121 (61.16%), Postives = 97/121 (80.17%), Query Frame = 0

Query:    6 GDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFAVMVKEATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIEMTIKYFRQELERTGEITPTGPKASKP 126
            G+G QTRSFQYV DLV GL+ LMN  YD PVN+GNP+EYT+K+FA ++ + T + S ++H+ AT+DDP +R+PDI++AK K+GW+P+VAV EGI  TI YFR+EL  TGEI PTGP AS+P
Sbjct:  219 GEGAQTRSFQYVDDLVNGLMKLMNGDYDMPVNLGNPDEYTIKDFATVIHKFTDTNSTIIHMPATEDDPRQRKPDITIAKSKIGWQPQVAVDEGIRKTIDYFRKELMDTGEIIPTGPDASRP 339

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig9355.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
W7TR87_9STRA	7.870e-51	62.70	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
W7TNW1_9STRA	2.100e-50	64.29	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A6H5KWP6_9PHAE	3.330e-50	65.60	UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus T...	[more]
A0A1E7EJ50_9STRA	1.100e-49	68.60	UDP-glucuronate decarboxylase n=2 Tax=Fragilariops...	[more]
A0A7S2HWZ1_9STRA	4.240e-48	61.60	UDP-glucuronate decarboxylase n=1 Tax=Helicotheca ...	[more]
A0A4D9D2V9_9STRA	6.870e-48	65.08	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
K8YTX9_NANGC	3.880e-47	64.29	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A812Q9G5_SYMMI	4.470e-47	59.20	UDP-glucuronate decarboxylase (Fragment) n=1 Tax=S...	[more]
A0A4D9CY17_9STRA	1.200e-46	62.70	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A7S2FJ01_9STRA	1.270e-46	61.16	UDP-glucuronate decarboxylase n=1 Tax=Florenciella...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..113 e-value: 6.3E-35 score: 123.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..132
None	No IPR available	PANTHER	PTHR43078:SF6	UDP-GLUCURONIC ACID DECARBOXYLASE 1	coord: 4..113
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 6..102 e-value: 2.5E-11 score: 43.6
IPR044516	UDP-glucuronic acid decarboxylase	PANTHER	PTHR43078	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	coord: 4..113
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 2..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig9355	contig	D-mesarthrocarpus_Contig9355:282..1500 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig9355.1.1	mRNA_D-mesarthrocarpus_Contig9355.1.1	Discosporangium mesarthrocarpum MT17_79	mRNA	D-mesarthrocarpus_Contig9355 282..1500 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9355.1.1 ID=prot_D-mesarthrocarpus_Contig9355.1.1|Name=mRNA_D-mesarthrocarpus_Contig9355.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp
TVRLPGDGLQTRSFQYVADLVRGLVALMNEGYDQPVNIGNPEEYTVKEFA
VMVKEATGSPSQVVHLEATKDDPNKRRPDISLAKEKLGWEPRVAVREGIE
MTIKYFRQELERTGEITPTGPKASKPGTGKSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR044516	UXS
IPR036291	NAD(P)-bd_dom_sf