prot_D-mesarthrocarpus_Contig930.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig930.2.1
Unique Nameprot_D-mesarthrocarpus_Contig930.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length257
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig930.2.1 vs. uniprot
Match: A0A6H5JRP3_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRP3_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.760e-43
Identity = 106/246 (43.09%), Postives = 132/246 (53.66%), Query Frame = 0 
Query:   21 GMSCLVRREGYLTVGSEHPSGVCGPEQALRLVSTGAYFEAFRQDKVCLETAAGNILTLSKGRVGRACSPENQFVLQAVATVRMTR--------GRDALSFAPPPDQEPSGEYCVYNPISGFYLSSKARPQAQCGETEHWRLEQAPAVPSQKCAKGGRSSGGXXXXNAHRRASGKXXXXXXXXXXXXTSVAGAAVAALLDPHYASVRSPLVALYGYVAAATALLLARGLLKHMVERATRG--GRGTD 256
            G SCL  + G++  G +  S VCG EQALR V+TGAYFEAFRQDKVCLE A G  LTL +  V +AC PE QFV Q VA  +++         G   L        E S EYC+YNP SGFYLS++ RP+AQCG  EHWR+  AP  P  K   G  +  G     A                        +A +ALL P++ S R+PL+  YGY+ AATALL+AR L   +      G  GRG+ 
Sbjct: 1082 GQSCLESQAGFVEAGGKRLSRVCGAEQALRPVATGAYFEAFRQDKVCLEVAGGGFLTLGRVHVAQACLPEFQFVFQEVAPTKLSSKDKGDGSGGGGRLVVGGGTAAE-SVEYCIYNPASGFYLSAQGRPRAQCGAMEHWRVRAAPLAPGLKGGGGSLAGSGGTSTKAK-----------------------SAFSALLHPNFLS-RAPLLTFYGYLLAATALLVARALFSMLATSPCVGATGRGSS 1302
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig930.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRP3_9PHAE1.760e-4343.09GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig930contigD-mesarthrocarpus_Contig930:1218..2223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig930.2.1mRNA_D-mesarthrocarpus_Contig930.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig930 1218..2225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig930.2.1 ID=prot_D-mesarthrocarpus_Contig930.2.1|Name=mRNA_D-mesarthrocarpus_Contig930.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=257bp
LTCWWGSSPSGSILRLARLGGMSCLVRREGYLTVGSEHPSGVCGPEQALR
LVSTGAYFEAFRQDKVCLETAAGNILTLSKGRVGRACSPENQFVLQAVAT
VRMTRGRDALSFAPPPDQEPSGEYCVYNPISGFYLSSKARPQAQCGETEH
WRLEQAPAVPSQKCAKGGRSSGGSSSSNAHRRASGKSGAPVSSSRRRHTS
VAGAAVAALLDPHYASVRSPLVALYGYVAAATALLLARGLLKHMVERATR
GGRGTDR
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