prot_D-mesarthrocarpus_Contig10877.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10877.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10877.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length94
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: D7FGT8_ECTSI (SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT8_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.040e-31
Identity = 63/92 (68.48%), Postives = 78/92 (84.78%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEELRQLSADWKK 92
            M+YVFGS+I+CDS   AK+VAFD+GVRA+TVTLEGDSFEPQGTLTGGSKSQLGV+L RL EL +AS+ELG  +ERL  + +++ +LSA  KK
Sbjct:  622 MSYVFGSSIVCDSLQIAKEVAFDRGVRAKTVTLEGDSFEPQGTLTGGSKSQLGVILGRLAELQSASRELGVHQERLRVVSDKIGRLSAASKK 713          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A6H5K638_9PHAE (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K638_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.620e-31
Identity = 61/88 (69.32%), Postives = 76/88 (86.36%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEELRQLSA 88
            M+YVFGS+I+CDS   AK+VAFD+GVRA+TVTLEGDSFEPQGTLTGGSKSQLGV+L RL EL +AS+ELG  +ERL  + +++ +LSA
Sbjct:  635 MSYVFGSSIVCDSLQIAKEVAFDRGVRAKTVTLEGDSFEPQGTLTGGSKSQLGVILGRLAELQSASRELGVHQERLRVVSDKIGRLSA 722          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A836CJQ0_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.120e-24
Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    3 YVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERL 76
            Y FG+T++CD+ + A+ VAFD+GVRARTVTLEGD+FEPQGTLTGGSK+QLG VLA+L +L  A+ E G  EER+
Sbjct:  632 YAFGTTLVCDALETARAVAFDRGVRARTVTLEGDTFEPQGTLTGGSKAQLGTVLAKLHQLSAANTEAGRLEERV 705          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A2D0QFI2_ICTPU (Structural maintenance of chromosomes protein n=7 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0QFI2_ICTPU)

HSP 1 Score: 95.1 bits (235), Expect = 8.940e-21
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEELRQLSADWKKVR 94
            M YVFG+T++CD+ D AK+VAFDKGV  +TVTL GD F+PQGTLTGG+++Q   VL++L E+     +L A+E  LA + +EL  L    +K R
Sbjct:  620 MEYVFGTTLVCDTLDNAKKVAFDKGVSTKTVTLGGDVFDPQGTLTGGARAQTASVLSKLAEVKDVQDKLRAKEAELASVEKELGSLKGTAEKYR 713          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A8C1DYA4_CYPCA (SMC hinge domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1DYA4_CYPCA)

HSP 1 Score: 93.6 bits (231), Expect = 3.070e-20
Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEELRQLSADWKKVR 94
            M YVFG+T++CDS D AK+VAFDKGV  +TVTL GD F+PQGTLTGG+++Q   VL++L E+      L A+E  L  +  EL  L    +K R
Sbjct:  571 MEYVFGTTLVCDSLDNAKKVAFDKGVSTKTVTLGGDVFDPQGTLTGGARAQTASVLSKLAEVKDIQDSLRAKEAELTAVESELSSLKGTAEKYR 664          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A6Q2XGE5_ESOLU (Structural maintenance of chromosomes 2 n=1 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2XGE5_ESOLU)

HSP 1 Score: 93.6 bits (231), Expect = 3.070e-20
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEEL 83
            M YVFGST++CD+ D AKQVAFD+ +  +TVTL GD F+PQGTLTGG++SQ   VL+ L EL  A + L ARE  L  + +EL
Sbjct:  613 MEYVFGSTLVCDTLDNAKQVAFDRRIMTKTVTLGGDVFDPQGTLTGGARSQSASVLSSLQELREAQENLSAREAELQAVDKEL 695          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A672KLH8_SINGR (Structural maintenance of chromosomes protein 2-like n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672KLH8_SINGR)

HSP 1 Score: 93.6 bits (231), Expect = 3.090e-20
Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEELRQLSADWKKVR 94
            M YVFG+T++CDS D AK+VAFDKGV  +TVTL GD F+PQGTLTGG+++Q   VL++L E+      L A+E  L  +  EL  L    +K R
Sbjct:  547 MEYVFGTTLVCDSLDNAKKVAFDKGVSTKTVTLGGDVFDPQGTLTGGARAQTASVLSKLAEVKDIQDSLRAKEAELTAVESELSSLKGTAEKYR 640          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A6Q2ZN69_ESOLU (Structural maintenance of chromosomes protein n=2 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2ZN69_ESOLU)

HSP 1 Score: 93.6 bits (231), Expect = 3.100e-20
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEEL 83
            M YVFGST++CD+ D AKQVAFD+ +  +TVTL GD F+PQGTLTGG++SQ   VL+ L EL  A + L ARE  L  + +EL
Sbjct:  599 MEYVFGSTLVCDTLDNAKQVAFDRRIMTKTVTLGGDVFDPQGTLTGGARSQSASVLSSLQELREAQENLSAREAELQAVDKEL 681          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A6Q2YFL4_ESOLU (Structural maintenance of chromosomes protein n=18 Tax=Protacanthopterygii TaxID=41705 RepID=A0A6Q2YFL4_ESOLU)

HSP 1 Score: 93.6 bits (231), Expect = 3.100e-20
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEEL 83
            M YVFGST++CD+ D AKQVAFD+ +  +TVTL GD F+PQGTLTGG++SQ   VL+ L EL  A + L ARE  L  + +EL
Sbjct:  607 MEYVFGSTLVCDTLDNAKQVAFDRRIMTKTVTLGGDVFDPQGTLTGGARSQSASVLSSLQELREAQENLSAREAELQAVDKEL 689          
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Match: A0A3P8XXT5_ESOLU (Structural maintenance of chromosomes protein n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P8XXT5_ESOLU)

HSP 1 Score: 93.6 bits (231), Expect = 3.100e-20
Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKSQLGVVLARLGELHTASKELGAREERLAQIMEEL 83
            M YVFGST++CD+ D AKQVAFD+ +  +TVTL GD F+PQGTLTGG++SQ   VL+ L EL  A + L ARE  L  + +EL
Sbjct:  620 MEYVFGSTLVCDTLDNAKQVAFDRRIMTKTVTLGGDVFDPQGTLTGGARSQSASVLSSLQELREAQENLSAREAELQAVDKEL 702          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10877.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGT8_ECTSI1.040e-3168.48SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) n=1... [more]
A0A6H5K638_9PHAE2.620e-3169.32Structural maintenance of chromosomes protein n=1 ... [more]
A0A836CJQ0_9STRA5.120e-2466.22Structural maintenance of chromosomes protein n=1 ... [more]
A0A2D0QFI2_ICTPU8.940e-2151.06Structural maintenance of chromosomes protein n=7 ... [more]
A0A8C1DYA4_CYPCA3.070e-2051.06SMC hinge domain-containing protein n=1 Tax=Cyprin... [more]
A0A6Q2XGE5_ESOLU3.070e-2056.63Structural maintenance of chromosomes 2 n=1 Tax=Es... [more]
A0A672KLH8_SINGR3.090e-2051.06Structural maintenance of chromosomes protein 2-li... [more]
A0A6Q2ZN69_ESOLU3.100e-2056.63Structural maintenance of chromosomes protein n=2 ... [more]
A0A6Q2YFL4_ESOLU3.100e-2056.63Structural maintenance of chromosomes protein n=18... [more]
A0A3P8XXT5_ESOLU3.100e-2056.63Structural maintenance of chromosomes protein n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availableGENE3D3.30.70.1620coord: 1..49
e-value: 1.0E-15
score: 59.2
NoneNo IPR availablePANTHERPTHR43977STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 1..93
NoneNo IPR availablePANTHERPTHR43977:SF2STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEINcoord: 1..93
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10877contigD-mesarthrocarpus_Contig10877:527..1680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10877.1.1mRNA_D-mesarthrocarpus_Contig10877.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10877 527..1710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10877.1.1 ID=prot_D-mesarthrocarpus_Contig10877.1.1|Name=mRNA_D-mesarthrocarpus_Contig10877.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=94bp
MAYVFGSTIICDSFDAAKQVAFDKGVRARTVTLEGDSFEPQGTLTGGSKS
QLGVVLARLGELHTASKELGAREERLAQIMEELRQLSADWKKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036277SMC_hinge_sf