prot_D-mesarthrocarpus_Contig1082.6.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1082.6.1
Unique Nameprot_D-mesarthrocarpus_Contig1082.6.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length96
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.750e-38
Identity = 69/87 (79.31%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    8 EAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLNTEEGF 94
            EAG++LK+ V NFMCHRKLS+ LCKHVNFI+GRNGSGKSAILAALQICLGA+A LTHRA ++ D IRHG KGDA LEVTLLNTE GF
Sbjct:   82 EAGVVLKVHVSNFMCHRKLSVPLCKHVNFINGRNGSGKSAILAALQICLGAKAHLTHRAKKMADFIRHGWKGDAVLEVTLLNTEHGF 168          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.420e-37
Identity = 69/88 (78.41%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    7 SEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLNTEEGF 94
            SEAG++LKI V NFMCHRKL++ LCK VNFI+GRNGSGKSAILAALQICLGA+A LTHRA ++ D IRHG KGDA LEVTLLNTE GF
Sbjct:  174 SEAGVVLKINVSNFMCHRKLTVPLCKQVNFINGRNGSGKSAILAALQICLGAKAHLTHRAKKMTDFIRHGWKGDAVLEVTLLNTEHGF 261          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: A0A836CML4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.700e-34
Identity = 63/89 (70.79%), Postives = 79/89 (88.76%), Query Frame = 0
Query:    7 SEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLNTEEGFK 95
            SE+G+IL+I V+NFMCHR L++ LC+++NFI+G NGSGKSAILAALQICLGARAR+THRA +LEDLIRHG  GDA++EV +LNT +G K
Sbjct:   72 SESGVILRIDVKNFMCHRHLTVDLCRNINFINGSNGSGKSAILAALQICLGARARVTHRAHKLEDLIRHGWGGDAEVEVKMLNTPDGHK 160          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: W7U0X2_9STRA (Structural maintenance of chromosomes 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0X2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 8.690e-30
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 0
Query:    7 SEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLN 89
            +E G+I+KI  ENFMCHRKLS+ LC +VNFIHG+NGSGKSAILAALQICLGARA +THR  RL D+IR G  G A + V+LLN
Sbjct:  145 AETGVIVKIYCENFMCHRKLSINLCPNVNFIHGQNGSGKSAILAALQICLGARANVTHRGARLSDMIRQGHDGHAIVRVSLLN 227          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: A0A7S2KU12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KU12_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.080e-29
Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 0
Query:    7 SEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGD---AKLEVTLLNT-EEGF 94
            +EAGII ++ VENFMCHRKLS+ LC++VNFIHG+NGSGKSAILAA+Q+CLGA AR THRA  L+DL+R  A  D   AKL VTLLN   +GF
Sbjct:  111 AEAGIIQEVYVENFMCHRKLSVKLCRNVNFIHGQNGSGKSAILAAIQVCLGAGARRTHRARNLKDLVRKEAGADCSGAKLRVTLLNKGSDGF 202          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: B8BRT7_THAPS (Smc-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRT7_THAPS)

HSP 1 Score: 117 bits (294), Expect = 1.040e-28
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 0
Query:    7 SEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGD---AKLEVTLLN 89
            +EAGII ++ VENFMCHRKLS+ LC++VNFIHG+NGSGKSAILAA+Q+CLGA AR THRA  L+DL+R  A  D   AKL VTLLN
Sbjct:   97 AEAGIINEVYVENFMCHRKLSVKLCRNVNFIHGQNGSGKSAILAAIQVCLGAGARRTHRARNLKDLVRKEAGADCTGAKLRVTLLN 182          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: A0A7S2UR98_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR98_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.930e-28
Identity = 58/91 (63.74%), Postives = 75/91 (82.42%), Query Frame = 0
Query:    7 SEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIR-HGAKGDAKLEVTLLNT-EEGFK 95
            +EAGII ++ V++FMCHRKL++ LC++VNFIHG NGSGKSAILAA+QICLGA AR THRA  L++L+R  G+   AK+ VTLLN  E+G+K
Sbjct:   59 AEAGIIKRVYVQDFMCHRKLTVDLCQNVNFIHGANGSGKSAILAAIQICLGAHARRTHRARNLKELVRKEGSNSGAKVRVTLLNGGEDGYK 149          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: F0YEV5_AURAN (SMC_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEV5_AURAN)

HSP 1 Score: 105 bits (262), Expect = 1.850e-27
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    6 TSEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLN 89
            +S AGII +I  E+FMCH+KL++  C+ +NFI+G NGSGKSAILAALQICLGA A+ THR  R+ DL+R G +G A + V+L+N
Sbjct:    8 SSSAGIIHEIYCEHFMCHKKLTIKPCRRINFINGANGSGKSAILAALQICLGASAKSTHRGNRMGDLVREGYEGQALVRVSLVN 91          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: A0A662YEN6_9STRA (AAA_23 domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEN6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.170e-27
Identity = 51/89 (57.30%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    5 VTSEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLNTEEG 93
            + SE G++ +I  ENFMCHRK+ + LC H+NFI G NGSGKSAI+AA+QICLGA AR+THR   +++LIRHG +G+A + +TL N  +G
Sbjct:  108 IDSEMGVVEEIYCENFMCHRKMRVALCPHINFITGENGSGKSAIIAAIQICLGASARVTHRGKSIKNLIRHGHEGNALVRITLRNDAKG 196          
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Match: A0A1V9ZWG2_9STRA (Structural maintenance of chromosomes protein 6 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWG2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.180e-27
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    6 TSEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILAALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLNTEEG 93
            +SE GII +I  ENFMCHR++S+ LC ++NFI G NGSGKSAI+AALQICLGA AR THR   +++LIRHG  G+A + +TLLN   G
Sbjct:   38 SSEMGIIQEIYCENFMCHRRMSIQLCPNINFITGENGSGKSAIIAALQICLGASARATHRGKSIKNLIRHGHDGNALVRITLLNDASG 125          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1082.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M1_ECTSI3.750e-3879.31Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
D7G4M2_ECTSI2.420e-3778.41Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A836CML4_9STRA5.700e-3470.79P-loop containing nucleoside triphosphate hydrolas... [more]
W7U0X2_9STRA8.690e-3069.88Structural maintenance of chromosomes 6 n=2 Tax=Mo... [more]
A0A7S2KU12_9STRA3.080e-2967.39Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
B8BRT7_THAPS1.040e-2869.77Smc-like protein n=1 Tax=Thalassiosira pseudonana ... [more]
A0A7S2UR98_9STRA4.930e-2863.74Hypothetical protein n=1 Tax=Attheya septentrional... [more]
F0YEV5_AURAN1.850e-2759.52SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A662YEN6_9STRA3.170e-2757.30AAA_23 domain-containing protein (Fragment) n=2 Ta... [more]
A0A1V9ZWG2_9STRA3.180e-2761.36Structural maintenance of chromosomes protein 6 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 12..86
e-value: 2.0E-13
score: 50.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 12..94
e-value: 1.8E-20
score: 75.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..87
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 7..90
IPR027132Structural maintenance of chromosomes protein 6PANTHERPTHR19306:SF6STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6coord: 7..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1082contigD-mesarthrocarpus_Contig1082:21706..23744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1082.6.1mRNA_D-mesarthrocarpus_Contig1082.6.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1082 21685..23744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1082.6.1 ID=prot_D-mesarthrocarpus_Contig1082.6.1|Name=mRNA_D-mesarthrocarpus_Contig1082.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp
MRGMVTSEAGIILKIMVENFMCHRKLSLTLCKHVNFIHGRNGSGKSAILA
ALQICLGARARLTHRATRLEDLIRHGAKGDAKLEVTLLNTEEGFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase
IPR027132SMC6