prot_D-mesarthrocarpus_Contig10707.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10707.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10707.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length72
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A7S2UU96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU96_9STRA)

HSP 1 Score: 118 bits (295), Expect = 8.450e-33
Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAIL 65
            PRGY+TNGHILVDA+KMSKSKGNFLM+ ECV+RF AD TRFA ADAGD+LEDANFA+DTANNA+L
Sbjct:   56 PRGYYTNGHILVDAEKMSKSKGNFLMLDECVERFSADATRFACADAGDTLEDANFAIDTANNAVL 120          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: D7FTL8_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL8_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.650e-31
Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEE 71
            PRGYFTNGH+ VDA KMSKSKGNFLMM +CVKRFGAD TRFALADAGDSLEDANFAVD+AN AIL L  EE
Sbjct:  748 PRGYFTNGHVQVDAMKMSKSKGNFLMMDDCVKRFGADATRFALADAGDSLEDANFAVDSANKAILALTGEE 818          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A835YRC2_9STRA (Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.560e-27
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEE 71
            P+GY+TNGHILVDA+KMSKSKGNFLM+ EC++RF AD TRFA A+AGDSL DANF V TANNAI+ L  EE
Sbjct:  705 PKGYWTNGHILVDAEKMSKSKGNFLMLNECIERFSADATRFACANAGDSLLDANFEVATANNAIITLTKEE 775          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: K0SLG0_THAOC (tRNA-synt_1e domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SLG0_THAOC)

HSP 1 Score: 106 bits (265), Expect = 6.110e-27
Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEEA 72
            PRGY+TNGHI+VDA+KMSKSKGNFLMM E + +F AD TRFA ADAGD+L+DANF   TAN+AI+ L NE A
Sbjct:  104 PRGYYTNGHIMVDAEKMSKSKGNFLMMLETINKFSADATRFACADAGDTLDDANFERSTANSAIVSLSNEAA 175          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A7R9W812_9STRA (Leucine--tRNA ligase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W812_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.630e-26
Identity = 52/71 (73.24%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEE 71
            PRGY+TNGH+LVDA+KMSKSKGNFLMM E VK++ AD TRFA ADAGDSL+DANF+ +TA+ AI+ L NEE
Sbjct:  519 PRGYYTNGHVLVDAEKMSKSKGNFLMMDETVKKYSADATRFACADAGDSLDDANFSRETADTAIVSLVNEE 589          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A7S2W6P9_9STRA (Leucine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W6P9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 8.510e-26
Identity = 51/71 (71.83%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEE 71
            PRGY+TNGH+LVDA+KMSKSKGNFLMM + V++F AD TRFA ADAGDSL+DANFA ++A++AI+ L NEE
Sbjct:  264 PRGYYTNGHVLVDAEKMSKSKGNFLMMDQTVEQFSADATRFACADAGDSLDDANFARESADSAIMSLINEE 334          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: B8BYD7_THAPS (Leucine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYD7_THAPS)

HSP 1 Score: 107 bits (268), Expect = 1.250e-25
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEEA 72
            PRGY+TNGHI+VDA+KMSKSKGNFLMM E ++ + AD TRFA ADAGD+L+DANF+ DTAN AI+ L NE A
Sbjct:  744 PRGYYTNGHIMVDAEKMSKSKGNFLMMLETIENYSADATRFACADAGDTLDDANFSRDTANTAIVSLSNEAA 815          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A7S3XPZ3_HETAK (Leucyl-tRNA synthetase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPZ3_HETAK)

HSP 1 Score: 107 bits (266), Expect = 2.290e-25
Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEE 71
            P+GY+ NGH+LVDA+KMSKSKGNF+M+ E V+ F AD TRFA ADAGD+LEDANFA DTAN A+L L  EE
Sbjct:  324 PKGYYCNGHVLVDAEKMSKSKGNFIMLNEAVETFSADGTRFACADAGDTLEDANFARDTANAAVLALSTEE 394          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A7S3V7F8_9STRA (Leucine--tRNA ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7F8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.330e-25
Identity = 49/71 (69.01%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEE 71
            P+G++TNGH+LVDA+KMSKSKGNFLMM + +K+F AD TRFA ADAGDS+EDANF+ +TA++AI+ L NEE
Sbjct:  745 PKGFYTNGHVLVDAEKMSKSKGNFLMMKDTIKQFSADATRFACADAGDSIEDANFSRETADSAIMSLVNEE 815          
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Match: A0A7S1D882_CYCTE (Leucine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D882_CYCTE)

HSP 1 Score: 106 bits (265), Expect = 3.010e-25
Identity = 50/72 (69.44%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    1 PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSLEDANFAVDTANNAILVLHNEEA 72
            PRGY+TNGH+LVDA+KMSKSKGNFL+M + +++F AD TRFA ADAGDSL+DANF+ +TA+ AI+ L NEEA
Sbjct:  278 PRGYYTNGHVLVDAEKMSKSKGNFLIMDDTIEQFTADATRFACADAGDSLDDANFSRETADMAIVSLSNEEA 349          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10707.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UU96_9STRA8.450e-3383.08Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
D7FTL8_ECTSI2.650e-3184.51Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YRC2_9STRA5.560e-2774.65Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
K0SLG0_THAOC6.110e-2770.83tRNA-synt_1e domain-containing protein n=1 Tax=Tha... [more]
A0A7R9W812_9STRA2.630e-2673.24Leucine--tRNA ligase n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2W6P9_9STRA8.510e-2671.83Leucine--tRNA ligase n=1 Tax=Eucampia antarctica T... [more]
B8BYD7_THAPS1.250e-2570.83Leucine--tRNA ligase n=1 Tax=Thalassiosira pseudon... [more]
A0A7S3XPZ3_HETAK2.290e-2570.42Leucyl-tRNA synthetase (Fragment) n=1 Tax=Heterosi... [more]
A0A7S3V7F8_9STRA2.330e-2569.01Leucine--tRNA ligase n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1D882_CYCTE3.010e-2569.44Leucine--tRNA ligase n=1 Tax=Cyclophora tenuis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015413Methionyl/Leucyl tRNA synthetasePFAMPF09334tRNA-synt_1gcoord: 5..62
e-value: 1.4E-8
score: 33.9
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 1..55
e-value: 6.2E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR45794:SF1LEUCINE--TRNA LIGASE, CYTOPLASMICcoord: 1..70
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 1..64
IPR004493Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicPANTHERPTHR45794LEUCYL-TRNA SYNTHETASEcoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10707contigD-mesarthrocarpus_Contig10707:488..1207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10707.1.1mRNA_D-mesarthrocarpus_Contig10707.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10707 488..1207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10707.1.1 ID=prot_D-mesarthrocarpus_Contig10707.1.1|Name=mRNA_D-mesarthrocarpus_Contig10707.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=72bp
PRGYFTNGHILVDAQKMSKSKGNFLMMGECVKRFGADPTRFALADAGDSL
EDANFAVDTANNAILVLHNEEA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015413Methionyl/Leucyl_tRNA_Synth
IPR014729Rossmann-like_a/b/a_fold
IPR004493Leu-tRNA-synth_Ia_arc/euk