prot_D-mesarthrocarpus_Contig10659.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10659.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10659.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length141
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Match: D7FRR9_ECTSI (rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR9_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.050e-38
Identity = 82/156 (52.56%), Postives = 100/156 (64.10%), Query Frame = 0
Query:    2 FVPSSASDVCVGDVLAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAVDGPEGVFQEGDSIRCVAQSVDPGTGKVVVTLNHAHVPASPAIFLRSYLSETISNAA--ISGATPSDT---------------EWSHFAIGSTVNGVVVALKDYGVVL 140
            FVP +AS+V  GD++AG V RV+ FGVFVRF G F+ALCPR+    R V+ P G+F+EGDS RCV Q VD  TG+VVVTL+   VP SPA++LRS LSET ++AA   + A PS                  W     GST N VVVALK+YGVVL
Sbjct:  885 FVPGAASNVSPGDLIAGYVCRVESFGVFVRFLGRFTALCPRSMAADRMVEDPSGMFEEGDSARCVVQRVDEDTGRVVVTLDRTTVPTSPALYLRSLLSETFASAAGGCAEAAPSGNLTGNEGAEASEEVARPWGRLEFGSTTNAVVVALKEYGVVL 1040          
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Match: A0A6H5LPP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPP1_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 8.050e-37
Identity = 78/155 (50.32%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    2 FVPSSASDVCVGDVLAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAVDGPEGVFQEGDSIRCVAQSVDPGTGKVVVTLNHAHVPASPAIFLRSYLSETISNAAIS----------GATPSDTE------WSHFAIGSTVNGVVVALKDYGVVL 140
            F+P + SDV  GD++AG V RV+ FGVFVRF G F+ALCPR+    R V  P G+F+EGDS RCV Q VD  TG++VVTL+   VP SP ++LRS LSET ++AA            G   +D        W     GST N VVVALK+YGVVL
Sbjct:  938 FMPGATSDVTPGDLIAGYVIRVESFGVFVRFLGRFTALCPRSMAADRMVQDPRGMFEEGDSARCVVQRVDEDTGRLVVTLDRTTVPTSPGLYLRSLLSETFASAAAGXXXXXXDNPGGGEGADATAEVARPWGRLEFGSTTNAVVVALKEYGVVL 1092          
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Match: W7TCI2_9STRA (Rrna biogenesis protein rrp5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCI2_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.570e-27
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 0
Query:    4 PSSASDVCVGDV-LAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAVDGPEGVFQEGDSIRCVAQSVDPGTGKVVVTLNHAHVPASPAIFLRSYLSETISNAAISGATPSDTEWSHFAIGSTVNGVVVALKDYGVVLS 141
            P    D+ +G   L G +SRV+ FG+FVRF GG +A+ PRA +  R VD   G+F+EGDS+RC+   VD    +V VT   + +P + + FL + L E++S   I        +W  FA+G+TVN  V A+KDYG+VLS
Sbjct:  898 PPRLQDLKIGRARLCGYISRVESFGLFVRFVGGQTAMAPRALIADRFVDDASGLFREGDSVRCLLHRVDADKDRVFVTTQRSQLPVTDSFFLETLLLESVSTIGIDTEESEVFDWQRFALGATVNATVTAVKDYGIVLS 1036          
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Match: A0A2P2MJT5_RHIMU (rRNA biogenesis protein RRP5 isoform X1 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MJT5_RHIMU)

HSP 1 Score: 60.5 bits (145), Expect = 6.560e-8
Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 0
Query:    3 VPSSASDVCVGDVLAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAVDGPEG----VFQEGDSIRCVAQSVDPGTGKVVVTLNHAHVPASPAIFLRSYLSETISNAAISGATPSDTE-----WSH-FAIGSTVNGVVVALKDYGVVLS 141
            +PS  S +C+  ++ G +  +   G FVRF G  +   PR    S+A+D         F  G S+     +V+  T K+ ++L  +   ++ A FL+ Y    +S   I     SDT+     W+  F+IGST+ GVV  L ++GV++S
Sbjct:  751 LPSDLSQICLQSLVPGYICNIIETGCFVRFLGHLTGFSPR----SKAMDDQRTRLSEAFYVGQSVCSNILNVNSETSKITLSLKQSCCSSTDACFLQEYF---LSEEKIFKLQHSDTKGMTLKWAEEFSIGSTIEGVVQELNEFGVIVS 892          
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Match: A0A2T9YNH3_9FUNG (Uncharacterized protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YNH3_9FUNG)

HSP 1 Score: 52.8 bits (125), Expect = 3.250e-5
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    6 SASDVC-VGDVLAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAVDGPEGVFQEGDSIRCVAQSVDPGTGKVVVTL 81
            S+ D C VG++ AG +S++  FGVFV+FFGG+S L     +    V   E  FQ+G ++     ++D  T KV ++L
Sbjct:  831 SSIDSCKVGNIEAGFISQITKFGVFVKFFGGYSGLASINSISDHYVSSAELEFQDGQTVLAKIVAIDTQTNKVSLSL 907          
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Match: A0A7S1UGX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGX6_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 3.790e-5
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0
Query:   11 CVGDVLAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAVDGPEGVFQEGDSIRCVAQSVDPGTGKVVVTLNHAHVPASPAIFLRSYLSE 100
            CVG V+      V   GVFVRF GG +ALCP++      +DG    F  GD++RC+ + VD  T K  +T +   +  S A +L + L E
Sbjct:   19 CVGSVVG-----VNNAGVFVRFGGGVTALCPKS-----QIDGDRDDFTYGDAVRCLIKHVD--TEKERLTCSLKALGTSDASYLANQLRE 96          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10659.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRR9_ECTSI1.050e-3852.56rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus si... [more]
A0A6H5LPP1_9PHAE8.050e-3750.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TCI2_9STRA1.570e-2742.45Rrna biogenesis protein rrp5 n=3 Tax=Monodopsidace... [more]
A0A2P2MJT5_RHIMU6.560e-830.20rRNA biogenesis protein RRP5 isoform X1 n=2 Tax=Rh... [more]
A0A2T9YNH3_9FUNG3.250e-537.66Uncharacterized protein n=1 Tax=Smittium simulii T... [more]
A0A7S1UGX6_9STRA3.790e-537.78Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 11..82
e-value: 4.2E-11
score: 52.9
IPR003029S1 domainPFAMPF00575S1coord: 12..80
e-value: 3.5E-9
score: 36.9
IPR003029S1 domainPROSITEPS50126S1coord: 13..82
score: 14.328993
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 4..85
e-value: 1.0E-13
score: 53.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 6..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10659contigD-mesarthrocarpus_Contig10659:320..802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10659.1.1mRNA_D-mesarthrocarpus_Contig10659.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10659 320..802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10659.1.1 ID=prot_D-mesarthrocarpus_Contig10659.1.1|Name=mRNA_D-mesarthrocarpus_Contig10659.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=141bp
GFVPSSASDVCVGDVLAGCVSRVQGFGVFVRFFGGFSALCPRAFVGSRAV
DGPEGVFQEGDSIRCVAQSVDPGTGKVVVTLNHAHVPASPAIFLRSYLSE
TISNAAISGATPSDTEWSHFAIGSTVNGVVVALKDYGVVLS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold