prot_D-mesarthrocarpus_Contig1065.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1065.1.1
Unique Nameprot_D-mesarthrocarpus_Contig1065.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length76
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1065.1.1 vs. uniprot
Match: D7FYC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC7_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 5.960e-15
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   18 PAGGLPKRLAAVMSYCRVSTRATCEVLVSMGWVVVNGEVMTDPQAKVDITKDRIVCNG 75
            PAGG PKRLA +MS+CRVS +ATCE+LV MG V VNG V  DP  KVD+  D +V NG
Sbjct:  246 PAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGVVARDPGIKVDLLTDIVVANG 303          
BLAST of mRNA_D-mesarthrocarpus_Contig1065.1.1 vs. uniprot
Match: A0A835YSP6_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.730e-14
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   21 GLPKRLAAVMSYCRVSTRATCEVLVSMGWVVVNGEVMTDPQAKVDITKDRIVCNG 75
            GLPK+L  V+SYCRVSTR TCE+LV++G V VNGEV+T+   KVDI  D I+ NG
Sbjct:  166 GLPKKLGTVLSYCRVSTRETCEMLVAIGRVTVNGEVVTNADKKVDILNDEIIANG 220          
BLAST of mRNA_D-mesarthrocarpus_Contig1065.1.1 vs. uniprot
Match: A0A6H5JE62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE62_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 8.430e-14
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   19 AGGLPKRLAAVMSYCRVSTRATCEVLVSMGWVVVNGEVMTDPQAKVDITKDRIVCNG 75
            AGG PKRLA +MS+CRVS +ATCE+LV MG V VNG V  DP  KVD+  D +V NG
Sbjct:  387 AGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGVVARDPGIKVDLLTDIVVANG 443          
BLAST of mRNA_D-mesarthrocarpus_Contig1065.1.1 vs. uniprot
Match: A0A4D9D3K9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3K9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.500e-9
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   17 VPAGGLPKRLAAVMSYCRVSTRATCEVLVSMGWVVVNGEVMTDPQAKVDITKDRIVCNGE 76
            V  G +P+ +  ++ YCR+S +ATCE+L+ +G V VNG V  DP A VD+ KD+I  +GE
Sbjct:  172 VVGGRIPRTILKLLVYCRLSDKATCEILLELGKVKVNGVVCDDPVALVDLVKDKIEFDGE 231          
BLAST of mRNA_D-mesarthrocarpus_Contig1065.1.1 vs. uniprot
Match: A0A0G4HKE4_9ALVE (SAP domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HKE4_9ALVE)

HSP 1 Score: 54.3 bits (129), Expect = 9.870e-7
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   22 LPKRLAAVMSYCRVSTRATCEVLVSMGWVVVNGEVMTDPQAKVDITKDRIVCNGE 76
            LPK+L   ++YCR+S    C +L+ MG V VNG+++  P   V++ +D+IV   E
Sbjct: 1205 LPKKLGTALTYCRISDSKGCRLLIEMGLVSVNGQIVKSPSTPVNLMRDKIVVKDE 1259          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1065.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FYC7_ECTSI5.960e-1563.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSP6_9STRA1.730e-1463.64S4 domain-containing protein n=1 Tax=Tribonema min... [more]
A0A6H5JE62_9PHAE8.430e-1463.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D3K9_9STRA7.500e-946.67Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0G4HKE4_9ALVE9.870e-740.00SAP domain-containing protein n=1 Tax=Chromera vel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 22..76
e-value: 3.6E-10
score: 40.9
NoneNo IPR availablePROSITEPS50889S4coord: 24..71
score: 9.299524
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 25..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1065contigD-mesarthrocarpus_Contig1065:243..470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1065.1.1mRNA_D-mesarthrocarpus_Contig1065.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1065 243..470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1065.1.1 ID=prot_D-mesarthrocarpus_Contig1065.1.1|Name=mRNA_D-mesarthrocarpus_Contig1065.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=76bp
MEAGGGGLKAKATEKAVPAGGLPKRLAAVMSYCRVSTRATCEVLVSMGWV
VVNGEVMTDPQAKVDITKDRIVCNGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036986S4_RNA-bd_sf