prot_D-mesarthrocarpus_Contig10517.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10517.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10517.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length58
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10517.1.1 vs. uniprot
Match: A0A6H5L404_9PHAE (GAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L404_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.560e-12
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0 
Query:    1 MAMKTMTSNILAVPVVSRSTGGGNGDVVAVIEMMNKSSGPFDENDKKLVTMLAAHI 56
            +AMKT T N+LAVPV+SRS    +G V+AVIEMMNK  G FDEND+KLV MLAAH+
Sbjct:  303 LAMKTTTRNMLAVPVMSRSDEKDDGKVIAVIEMMNKPEG-FDENDEKLVGMLAAHV 357
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10517.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L404_9PHAE1.560e-1267.86GAF domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003018GAF domainPFAMPF01590GAFcoord: 9..58
e-value: 1.3E-5
score: 25.8
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 2..58
e-value: 1.1E-9
score: 39.9
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 4..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10517contigD-mesarthrocarpus_Contig10517:62..235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10517.1.1mRNA_D-mesarthrocarpus_Contig10517.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10517 38..235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10517.1.1 ID=prot_D-mesarthrocarpus_Contig10517.1.1|Name=mRNA_D-mesarthrocarpus_Contig10517.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=58bp
MAMKTMTSNILAVPVVSRSTGGGNGDVVAVIEMMNKSSGPFDENDKKLVT
MLAAHIAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003018GAF
IPR029016GAF-like_dom_sf