prot_D-mesarthrocarpus_Contig10509.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10509.3.1
Unique Nameprot_D-mesarthrocarpus_Contig10509.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length216
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 2.740e-106
Identity = 152/204 (74.51%), Postives = 180/204 (88.24%), Query Frame = 0
Query:   13 PTLTHEEIPDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGLE 216
            P LTH+++P+E++YLLDGTSML+RAFY   A GYLA++GATEVGA+LAMGIEFA+FINEV PRY+AMAFDV R+TTFRR ++P YKAQR P P DL LQ+PLAKA++EALGCRTFEMEG+EADDV+ATL RWGRSVGLGVVVCS DKDM QLVR+RVHVM PRR GY+I+G +EV A+FGV+PS LPDL GL GD ADNIPG++
Sbjct:    5 PPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVK 208          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 217 bits (552), Expect = 6.940e-68
Identity = 105/160 (65.62%), Postives = 126/160 (78.75%), Query Frame = 0
Query:   17 HEEIPDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRR 176
            H ++PDET+++LDGTSML+RA +   +  YLAADGATEV A+LAMGIE A+FI EV PRYLA+AFDVDR++TFRR + P YKA R PHP DL LQ+PLA A+ + LGC      G+EADDV+ATL  WGRS+GL VV+ S DKDM QLVRERVHVM PRR
Sbjct:   57 HTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLATWGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRR 216          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A212PKF8_9DELT (Ribonuclease H n=1 Tax=Geobacter sp. DSM 9736 TaxID=1277350 RepID=A0A212PKF8_9DELT)

HSP 1 Score: 152 bits (383), Expect = 5.270e-40
Identity = 90/196 (45.92%), Postives = 118/196 (60.20%), Query Frame = 0
Query:   24 TVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFI----NEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            T+YLLDG+S +YRA+Y          DGAT  G        F R +     E  P  LA+ FD  R+ TFRRD++P YKA R   PEDL +QVP  + + +AL     E  GFEADDVIATL R G + G  V V + DKD+ Q+V +R+ ++   +G  S  G +EV  RFGV P ++ D++GLAGDAADNIPG+
Sbjct:    8 TLYLLDGSSYIYRAYYGIR-------DGATSGGMPTNAIFGFTRMLLGLLQENKPDRLAVVFDPPREETFRRDIYPAYKAHRDAMPEDLVIQVPYIRRIVQALNITAVEAPGFEADDVIATLARAGAAEGFEVTVVTGDKDLLQIVTDRIGLLDTMKGIRS--GPQEVLDRFGVPPERVVDVLGLAGDAADNIPGV 194          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 152 bits (383), Expect = 5.440e-40
Identity = 85/191 (44.50%), Postives = 115/191 (60.21%), Query Frame = 0
Query:   25 VYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            +YLLDG+S +YRA+Y    S   A  G     A+L         + E  P Y A+ FD  R+ TFRRD++P YKA R   PEDL LQ+P  + + +AL     E  GFEADDVIATL R   + G+ V V + DKD+ Q+V +R+ ++   +G  S  G +EV  RFGV P  + D++GLAGD+ADNIPG+
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAAGIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGV 192          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A6N9AYG0_9GAMM (DNA polymerase I (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9AYG0_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 8.850e-40
Identity = 82/195 (42.05%), Postives = 113/195 (57.95%), Query Frame = 0
Query:   21 PDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            P +++YL+DGT+ +YRAF++      L+       GA+  +G    R I E  P YL   FD  +  TFR D++  YKA R P P+DL+ Q  L K M  A+G ++  + G EADDVI TL       GL   + S DKD+ QLV ERV V+   RG  + +G  +VK +FGVRP Q+ D + L GD +DNIPG+
Sbjct:    4 PSKSLYLIDGTAYVYRAFHSTD----LSTSSGEPTGAVYGVGNMLRRVIREHEPDYLVAVFDA-KGKTFRHDLYEEYKANRPPMPDDLRSQYDLIKEMVVAMGIKSISIPGVEADDVIGTLATAACEAGLTTYISSSDKDLTQLVNERVTVIDDMRG--TELGPSQVKEKFGVRPDQIIDYLSLVGDTSDNIPGV 191          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT)

HSP 1 Score: 151 bits (381), Expect = 9.810e-40
Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 0
Query:   25 VYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            +YLLDG+S +YRAFY       LA  G     A+          + E  P YLA+ FD  RD TFRR+++P YKA R   PEDL  Q+P  + + EAL   T E  GFEADDVIATL R     G+ V V + DKD+ Q+V +++ ++   +   S  G +EV  RFGV P ++PD++GL+GD +DNIPG+
Sbjct:    7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEEGIRVTVVTGDKDLMQIVNDKICLLDTMKDSCS--GPQEVLERFGVPPERVPDVLGLSGDTSDNIPGV 192          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A1G1MD53_9BACT (DNA polymerase I n=1 Tax=Omnitrophica WOR_2 bacterium RBG_13_41_10 TaxID=1801849 RepID=A0A1G1MD53_9BACT)

HSP 1 Score: 154 bits (389), Expect = 1.240e-39
Identity = 87/191 (45.55%), Postives = 113/191 (59.16%), Query Frame = 0
Query:   25 VYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            +YL+D T+  YRAFYA      LA        A+    +   + I E  P YL + FDV RDT FR+  F  YK QR P P+ L  Q+PL K +  A G   FE EGFEADD+IATLT+  ++ GLGV + S DKDM QLV + V V  P +    I   ++V+ RF VRP Q+P+++ L GD ADNIPG+
Sbjct:    6 LYLIDATAFCYRAFYALRG---LATSLGQATNAVYGFTVILNKLIKEQKPEYLGICFDVSRDT-FRQRKFADYKIQRPPMPDSLSSQIPLIKEIIAAYGIAIFEKEGFEADDIIATLTQKAKAEGLGVAIVSSDKDMLQLVDDEVMVFSPSKDETIIYDIKKVQERFKVRPQQIPEIIALMGDNADNIPGV 192          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A7C5BBV9_9DELT (DNA polymerase I n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5BBV9_9DELT)

HSP 1 Score: 153 bits (386), Expect = 3.390e-39
Identity = 84/196 (42.86%), Postives = 118/196 (60.20%), Query Frame = 0
Query:   21 PDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGLE 216
            P + +YL+DGTS LYRAF+A     +L+        A+        + + E  P  LA+ FD  + + FR+D+F  YKA R P P+DLKLQ+P  K + EA+     E+EGFEADDVIATLT   +  G+ VV+ S DKD+ Q+V E V ++   +        E+V+ +FGV P Q+PD +GL GD +DNIPG+E
Sbjct:    8 PFQKLYLIDGTSYLYRAFFALP---HLSTSKGFPTNAIFGFTSMLLKLLREEKPEGLAVVFDGPKPS-FRKDLFADYKAHRPPAPQDLKLQIPYVKKILEAMRIPVLELEGFEADDVIATLTEKAKKEGISVVIVSGDKDLLQIVSEEVSLLDTMKN--ERFTPEKVREKFGVSPEQIPDFLGLVGDQSDNIPGIE 197          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A0S7WIB2_9BACT (53EXOc domain-containing protein (Fragment) n=1 Tax=candidate division TA06 bacterium DG_26 TaxID=1703771 RepID=A0A0S7WIB2_9BACT)

HSP 1 Score: 148 bits (373), Expect = 5.000e-39
Identity = 80/195 (41.03%), Postives = 118/195 (60.51%), Query Frame = 0
Query:   23 ETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIV--GDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            E ++L+DG+++ YR+F+A    G   + G    GA         + + E +P ++A+ FD    T FR   +P YKA R   P++LK+Q+P    + EALG    E+EG+EADDV+ TLTR G   G+ V + + DKD  QLV E+V V+ P R G  IV    E+V+ R+GV P Q+ D++GLAGD +DN+PG+
Sbjct:    2 ERLFLVDGSAIAYRSFFALRKQGLSTSTG-EPTGASYGYTRFILKILKEFSPEFIAVCFDTSAPT-FRHVKYPEYKATREKAPDELKVQIPRIAQITEALGIPMLELEGYEADDVMGTLTRRGEQQGMEVYLITSDKDFLQLVNEKVRVINPMRAGQEIVVYDTEKVRERYGVEPHQVADVLGLAGDVSDNVPGV 194          
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A6B1GMH0_9GAMM (DNA polymerase I (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6B1GMH0_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 8.260e-39
Identity = 82/195 (42.05%), Postives = 113/195 (57.95%), Query Frame = 0
Query:   21 PDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 215
            P +++YL+DGT+ +YRAF++      L+       GA+  +G    R I E  P YL   FD  +  TFR D++  YKA R P P+DL+ Q  L K M  A+G ++  + G EADDVI TL       GL   + S DKD+ QLV ERV V+   RG  + +G  +VK +FGVRP Q+ D + L GD +DNIPG+
Sbjct:    4 PSKSLYLIDGTAYVYRAFHSTD----LSTSSGEPTGAVYGVGNMLRRVIREHEPDYLVAVFDA-KGKTFRHDLYEEYKANRPPMPDDLRSQYDLIKEMVVAMGIKSISIPGVEADDVIGTLATAACEAGLTTYISSSDKDLTQLVNERVTVIDDMRG--TELGPSQVKEKFGVRPDQIIDYLSLVGDTSDNIPGV 191          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE2.740e-10674.5153EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA6.940e-6865.635'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A212PKF8_9DELT5.270e-4045.92Ribonuclease H n=1 Tax=Geobacter sp. DSM 9736 TaxI... [more]
A0A353MEJ4_9DELT5.440e-4044.50Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A6N9AYG0_9GAMM8.850e-4042.05DNA polymerase I (Fragment) n=1 Tax=Gammaproteobac... [more]
A0A533SDF6_9BACT9.810e-4043.98Ribonuclease H n=1 Tax=bacterium TaxID=1869227 Rep... [more]
A0A1G1MD53_9BACT1.240e-3945.55DNA polymerase I n=1 Tax=Omnitrophica WOR_2 bacter... [more]
A0A7C5BBV9_9DELT3.390e-3942.86DNA polymerase I n=1 Tax=Deltaproteobacteria bacte... [more]
A0A0S7WIB2_9BACT5.000e-3941.0353EXOc domain-containing protein (Fragment) n=1 Ta... [more]
A0A6B1GMH0_9GAMM8.260e-3942.05DNA polymerase I (Fragment) n=1 Tax=Gammaproteobac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0024215'-3' exonucleaseSMARTSM0047553exo3coord: 20..216
e-value: 2.8E-33
score: 126.5
NoneNo IPR availableGENE3D3.40.50.1010coord: 15..194
e-value: 2.3E-42
score: 146.3
NoneNo IPR availableCDDcd09859PIN_53EXOcoord: 27..189
e-value: 2.08402E-54
score: 169.468
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 25..192
e-value: 8.6E-41
score: 139.4
IPR038969Flap endonucleasePANTHERPTHR42646FLAP ENDONUCLEASE XNIcoord: 23..215
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 23..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10509contigD-mesarthrocarpus_Contig10509:2164..3949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10509.3.1mRNA_D-mesarthrocarpus_Contig10509.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10509 2164..3949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10509.3.1 ID=prot_D-mesarthrocarpus_Contig10509.3.1|Name=mRNA_D-mesarthrocarpus_Contig10509.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=216bp
MGALRQEDYLERPTLTHEEIPDETVYLLDGTSMLYRAFYAPSASGYLAAD
GATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQ
RVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGL
GVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPD
LMGLAGDAADNIPGLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0024215-3_exonuclease
IPR0200465-3_exonucl_a-hlix_arch_N
IPR038969FEN
IPR029060PIN-like_dom_sf