mRNA_D-mesarthrocarpus_Contig10509.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE) HSP 1 Score: 316 bits (809), Expect = 2.740e-106 Identity = 152/204 (74.51%), Postives = 180/204 (88.24%), Query Frame = 1
Query: 37 PTLTHEEIPDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGLE 648
P LTH+++P+E++YLLDGTSML+RAFY A GYLA++GATEVGA+LAMGIEFA+FINEV PRY+AMAFDV R+TTFRR ++P YKAQR P P DL LQ+PLAKA++EALGCRTFEMEG+EADDV+ATL RWGRSVGLGVVVCS DKDM QLVR+RVHVM PRR GY+I+G +EV A+FGV+PS LPDL GL GD ADNIPG++
Sbjct: 5 PPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLARWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVK 208
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA) HSP 1 Score: 217 bits (552), Expect = 6.940e-68 Identity = 105/160 (65.62%), Postives = 126/160 (78.75%), Query Frame = 1
Query: 49 HEEIPDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRR 528
H ++PDET+++LDGTSML+RA + + YLAADGATEV A+LAMGIE A+FI EV PRYLA+AFDVDR++TFRR + P YKA R PHP DL LQ+PLA A+ + LGC G+EADDV+ATL WGRS+GL VV+ S DKDM QLVRERVHVM PRR
Sbjct: 57 HTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLATWGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRR 216
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A212PKF8_9DELT (Ribonuclease H n=1 Tax=Geobacter sp. DSM 9736 TaxID=1277350 RepID=A0A212PKF8_9DELT) HSP 1 Score: 152 bits (383), Expect = 5.270e-40 Identity = 90/196 (45.92%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 70 TVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFI----NEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
T+YLLDG+S +YRA+Y DGAT G F R + E P LA+ FD R+ TFRRD++P YKA R PEDL +QVP + + +AL E GFEADDVIATL R G + G V V + DKD+ Q+V +R+ ++ +G S G +EV RFGV P ++ D++GLAGDAADNIPG+
Sbjct: 8 TLYLLDGSSYIYRAYYGIR-------DGATSGGMPTNAIFGFTRMLLGLLQENKPDRLAVVFDPPREETFRRDIYPAYKAHRDAMPEDLVIQVPYIRRIVQALNITAVEAPGFEADDVIATLARAGAAEGFEVTVVTGDKDLLQIVTDRIGLLDTMKGIRS--GPQEVLDRFGVPPERVVDVLGLAGDAADNIPGV 194
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT) HSP 1 Score: 152 bits (383), Expect = 5.440e-40 Identity = 85/191 (44.50%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 73 VYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
+YLLDG+S +YRA+Y S A G A+L + E P Y A+ FD R+ TFRRD++P YKA R PEDL LQ+P + + +AL E GFEADDVIATL R + G+ V V + DKD+ Q+V +R+ ++ +G S G +EV RFGV P + D++GLAGD+ADNIPG+
Sbjct: 7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAAGIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGV 192
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A6N9AYG0_9GAMM (DNA polymerase I (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9AYG0_9GAMM) HSP 1 Score: 146 bits (368), Expect = 8.850e-40 Identity = 82/195 (42.05%), Postives = 113/195 (57.95%), Query Frame = 1
Query: 61 PDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
P +++YL+DGT+ +YRAF++ L+ GA+ +G R I E P YL FD + TFR D++ YKA R P P+DL+ Q L K M A+G ++ + G EADDVI TL GL + S DKD+ QLV ERV V+ RG + +G +VK +FGVRP Q+ D + L GD +DNIPG+
Sbjct: 4 PSKSLYLIDGTAYVYRAFHSTD----LSTSSGEPTGAVYGVGNMLRRVIREHEPDYLVAVFDA-KGKTFRHDLYEEYKANRPPMPDDLRSQYDLIKEMVVAMGIKSISIPGVEADDVIGTLATAACEAGLTTYISSSDKDLTQLVNERVTVIDDMRG--TELGPSQVKEKFGVRPDQIIDYLSLVGDTSDNIPGV 191
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT) HSP 1 Score: 151 bits (381), Expect = 9.810e-40 Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 73 VYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
+YLLDG+S +YRAFY LA G A+ + E P YLA+ FD RD TFRR+++P YKA R PEDL Q+P + + EAL T E GFEADDVIATL R G+ V V + DKD+ Q+V +++ ++ + S G +EV RFGV P ++PD++GL+GD +DNIPG+
Sbjct: 7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEEGIRVTVVTGDKDLMQIVNDKICLLDTMKDSCS--GPQEVLERFGVPPERVPDVLGLSGDTSDNIPGV 192
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A1G1MD53_9BACT (DNA polymerase I n=1 Tax=Omnitrophica WOR_2 bacterium RBG_13_41_10 TaxID=1801849 RepID=A0A1G1MD53_9BACT) HSP 1 Score: 154 bits (389), Expect = 1.240e-39 Identity = 87/191 (45.55%), Postives = 113/191 (59.16%), Query Frame = 1
Query: 73 VYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
+YL+D T+ YRAFYA LA A+ + + I E P YL + FDV RDT FR+ F YK QR P P+ L Q+PL K + A G FE EGFEADD+IATLT+ ++ GLGV + S DKDM QLV + V V P + I ++V+ RF VRP Q+P+++ L GD ADNIPG+
Sbjct: 6 LYLIDATAFCYRAFYALRG---LATSLGQATNAVYGFTVILNKLIKEQKPEYLGICFDVSRDT-FRQRKFADYKIQRPPMPDSLSSQIPLIKEIIAAYGIAIFEKEGFEADDIIATLTQKAKAEGLGVAIVSSDKDMLQLVDDEVMVFSPSKDETIIYDIKKVQERFKVRPQQIPEIIALMGDNADNIPGV 192
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A7C5BBV9_9DELT (DNA polymerase I n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5BBV9_9DELT) HSP 1 Score: 153 bits (386), Expect = 3.390e-39 Identity = 84/196 (42.86%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 61 PDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGLE 648
P + +YL+DGTS LYRAF+A +L+ A+ + + E P LA+ FD + + FR+D+F YKA R P P+DLKLQ+P K + EA+ E+EGFEADDVIATLT + G+ VV+ S DKD+ Q+V E V ++ + E+V+ +FGV P Q+PD +GL GD +DNIPG+E
Sbjct: 8 PFQKLYLIDGTSYLYRAFFALP---HLSTSKGFPTNAIFGFTSMLLKLLREEKPEGLAVVFDGPKPS-FRKDLFADYKAHRPPAPQDLKLQIPYVKKILEAMRIPVLELEGFEADDVIATLTEKAKKEGISVVIVSGDKDLLQIVSEEVSLLDTMKN--ERFTPEKVREKFGVSPEQIPDFLGLVGDQSDNIPGIE 197
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A0S7WIB2_9BACT (53EXOc domain-containing protein (Fragment) n=1 Tax=candidate division TA06 bacterium DG_26 TaxID=1703771 RepID=A0A0S7WIB2_9BACT) HSP 1 Score: 148 bits (373), Expect = 5.000e-39 Identity = 80/195 (41.03%), Postives = 118/195 (60.51%), Query Frame = 1
Query: 67 ETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIV--GDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
E ++L+DG+++ YR+F+A G + G GA + + E +P ++A+ FD T FR +P YKA R P++LK+Q+P + EALG E+EG+EADDV+ TLTR G G+ V + + DKD QLV E+V V+ P R G IV E+V+ R+GV P Q+ D++GLAGD +DN+PG+
Sbjct: 2 ERLFLVDGSAIAYRSFFALRKQGLSTSTG-EPTGASYGYTRFILKILKEFSPEFIAVCFDTSAPT-FRHVKYPEYKATREKAPDELKVQIPRIAQITEALGIPMLELEGYEADDVMGTLTRRGEQQGMEVYLITSDKDFLQLVNEKVRVINPMRAGQEIVVYDTEKVRERYGVEPHQVADVLGLAGDVSDNVPGV 194
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Match: A0A6B1GMH0_9GAMM (DNA polymerase I (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6B1GMH0_9GAMM) HSP 1 Score: 146 bits (368), Expect = 8.260e-39 Identity = 82/195 (42.05%), Postives = 113/195 (57.95%), Query Frame = 1
Query: 61 PDETVYLLDGTSMLYRAFYAPSASGYLAADGATEVGALLAMGIEFARFINEVNPRYLAMAFDVDRDTTFRRDMFPPYKAQRVPHPEDLKLQVPLAKAMAEALGCRTFEMEGFEADDVIATLTRWGRSVGLGVVVCSVDKDMWQLVRERVHVMGPRRGGYSIVGDEEVKARFGVRPSQLPDLMGLAGDAADNIPGL 645
P +++YL+DGT+ +YRAF++ L+ GA+ +G R I E P YL FD + TFR D++ YKA R P P+DL+ Q L K M A+G ++ + G EADDVI TL GL + S DKD+ QLV ERV V+ RG + +G +VK +FGVRP Q+ D + L GD +DNIPG+
Sbjct: 4 PSKSLYLIDGTAYVYRAFHSTD----LSTSSGEPTGAVYGVGNMLRRVIREHEPDYLVAVFDA-KGKTFRHDLYEEYKANRPPMPDDLRSQYDLIKEMVVAMGIKSISIPGVEADDVIGTLATAACEAGLTTYISSSDKDLTQLVNERVTVIDDMRG--TELGPSQVKEKFGVRPDQIIDYLSLVGDTSDNIPGV 191 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10509.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10509.3.1 >prot_D-mesarthrocarpus_Contig10509.3.1 ID=prot_D-mesarthrocarpus_Contig10509.3.1|Name=mRNA_D-mesarthrocarpus_Contig10509.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=216bp MGALRQEDYLERPTLTHEEIPDETVYLLDGTSMLYRAFYAPSASGYLAADback to top mRNA from alignment at D-mesarthrocarpus_Contig10509:2164..3949+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10509.3.1 ID=mRNA_D-mesarthrocarpus_Contig10509.3.1|Name=mRNA_D-mesarthrocarpus_Contig10509.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1786bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10509:2164..3949+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10509:2164..3949+ >mRNA_D-mesarthrocarpus_Contig10509.3.1 ID=mRNA_D-mesarthrocarpus_Contig10509.3.1|Name=mRNA_D-mesarthrocarpus_Contig10509.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=648bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10509:2164..3949+ (Discosporangium mesarthrocarpum MT17_79)back to top |