prot_D-mesarthrocarpus_Contig1050.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1050.2.1
Unique Nameprot_D-mesarthrocarpus_Contig1050.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length240
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1050.2.1 vs. uniprot
Match: A0A6H5J909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.150e-32
Identity = 88/207 (42.51%), Postives = 112/207 (54.11%), Query Frame = 0
Query:   19 PGRQETEAQKREDRSMHELYRLVSRAAQAVTLSGVLAEVIQRCP----ALSSSLPWGRLQGAALWRLVCGREEHSRVTSLLAALVRPDS--GVPLTLREDYVRQLGQECPFYFGEGDVAAFEGLELLRRARGVMAHDAKLGLGYGGSEESDALILQGSAKLSEAASSWRPGDVLEPRGQLDRACDALLEVGKAFGVVDVCLSCAQGF 219
            P ++  +A KRE   +H  YRLVSRAA+AV ++GVLA           A   ++PW  L G  LWRLV G +EH R + LLA LV   +        R DY R+LG  C  +FG GD   FEG+ELLRRA                + E+DA   +G+  L+EAA  WR    L   GQL RAC AL  VG+   VVDVC++CA+ F
Sbjct:  234 PQQRNQKALKREALEVHAAYRLVSRAAEAVRMAGVLARAAASSAVGGAAAVDNVPWSSLDGVPLWRLVTGGDEHRRASFLLADLVGATTKGNNNAESRRDYARELGSWCRGFFGAGDRQTFEGVELLRRAAASGXXXXXXXXRLTAAAEADA--RRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNF 438          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.2.1 vs. uniprot
Match: A0A7S2YFK1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFK1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.240e-10
Identity = 61/223 (27.35%), Postives = 101/223 (45.29%), Query Frame = 0
Query:   26 AQKREDRSMHELYRLVSRAAQAVTLSGVL--AEVIQRCPALSSSLPWGRLQGAALWRLVCGREEHSRVTSLLAALV-----RPDSGVPLTLREDYVR-QLGQECPFYFGEGDVAAFEGLELLRRARGVMAHDAKLGLGYGGSEESDALILQGSAKLSEAASSWRPGDV---------------------LEPRGQLDRACDALLEVGKAFGVVDVCLSCAQGF 219
            AQ  E+R++H LYRL+SRA+Q + L  +L  +E I   P     + WG L GA + +LV     H R+ +LL  LV        +  P+  + D +  +L Q+C  YF       ++GL L   A   ++H         GS       +Q ++ L++AA +W+   +                     ++ R  L RA D L+++     VV++C + +Q F
Sbjct:  893 AQVLEERNIHSLYRLISRASQLLHLLSLLLRSEGISGLP----QIDWGHLHGATVSQLVQSSAGHERLAALLNDLVVATASNTATSSPVVTQADQIAIELAQQCYLYFPPASRFTYQGLRLANEA---LSHPF-------GSSSRRQTGIQAASILTDAARNWQSASLVTGRIVRGSGKENYKEIAERAIKHRSPLARAADLLIQLEDVSNVVELCFTTSQNF 1101          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.2.1 vs. uniprot
Match: A0A7S2LDJ9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDJ9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.210e-6
Identity = 57/205 (27.80%), Postives = 84/205 (40.98%), Query Frame = 0
Query:   30 EDRSMHELYRLVSRAAQAVTLSGVLAEVIQRCPALSSS--------LPWGRLQGAALWRLVCGREEHS-RVTSLLAALVRPDS--GVPLTLREDYVRQLGQECPFYFGEGDVAAFEGLELLRRARGVMAHDAKLGLGYGGSEESDALIL----QGSAKLSEAASSWRPGDVLEPRGQLDRACDALLEVGKAFGVVDVCLSCAQGF 219
            E +S+H LYRL++R  Q +TL  +L     RC   S++        + WG L       LVC    H+ R+ +LL  L   ++      T +ED    L  +C  Y+         G   L     V     +  +       S  LIL      +   + A+SS  P         L + C AL +VG+  G+V VCL+CA  F
Sbjct:  123 EHKSLHSLYRLITRTQQLLTLLHILRT---RCSGSSNTSSNTSMMVVEWGLLSSIRTCDLVCHPTAHTERIGALLHTLFTSNTTXXXXXTNKEDLSAMLQTQCYLYYSPASRYVHRGYVALNAHEDV-EEAVQCWVAAAKCWRSPGLILGSFGAATGNTNSASSSLSP---------LTQVCRALADVGQYVGIVQVCLTCAANF 314          
BLAST of mRNA_D-mesarthrocarpus_Contig1050.2.1 vs. uniprot
Match: A0A7S4AWN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWN6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.070e-5
Identity = 59/214 (27.57%), Postives = 92/214 (42.99%), Query Frame = 0
Query:   30 EDRSMHELYRLVSRAAQAVTLSGVLAEVIQRCPALSSSLPWGRLQGAALWRLVCGREEHSRVTSLLAALVRP--DSGVPLTLREDYV-RQLGQECPFYFGEGDVAAFEGLELLRRARGVMAHDAKLGLGYGGSEESDALILQGSAKLSEAASSWRP-----GDVLEPR----------------GQLDRACDALLEVGKAFGVVDVCLSCAQGF 219
            E+RS+H LYRL+SR  Q ++L   L       P L   + WG L G  + +LV       R+ +LL  LV    D+    +   +++   L Q+C  YF  G+  ++ G ++ + A         L L +G +  +     + +  L EAA +W       G VL+ R                  L RA   L ++    G+VDVCL+ A  F
Sbjct: 1211 EERSIHSLYRLLSRITQLLSLLSCLRRA-HSMPDLPE-VEWGLLHGITVSQLVETSYGQERIENLLNKLVTSGFDNMTMASADANHLANMLSQQCYHYFSPGNRYSYLGFQMAKEA---------LSLPHGQARRA-VRANEAAGYLKEAAKNWFSPTLITGRVLQTRESERYFEIAERAIKYNSPLARATSLLDDLEDVEGLVDVCLTTAMNF 1412          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1050.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J909_9PHAE1.150e-3242.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2YFK1_9STRA1.240e-1027.35Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2LDJ9_9STRA2.210e-627.80Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S4AWN6_9STRA6.070e-527.57Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1780coord: 4..101
e-value: 2.1E-8
score: 36.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR10350:SF6NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 9..217
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 9..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1050contigD-mesarthrocarpus_Contig1050:516..1235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1050.2.1mRNA_D-mesarthrocarpus_Contig1050.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1050 514..1235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1050.2.1 ID=prot_D-mesarthrocarpus_Contig1050.2.1|Name=mRNA_D-mesarthrocarpus_Contig1050.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=240bp
MMPGALRQHQNQHQHQQDPGRQETEAQKREDRSMHELYRLVSRAAQAVTL
SGVLAEVIQRCPALSSSLPWGRLQGAALWRLVCGREEHSRVTSLLAALVR
PDSGVPLTLREDYVRQLGQECPFYFGEGDVAAFEGLELLRRARGVMAHDA
KLGLGYGGSEESDALILQGSAKLSEAASSWRPGDVLEPRGQLDRACDALL
EVGKAFGVVDVCLSCAQGFTDPMSEVGGGGEGEASAATVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004870Nucleoporin_Nup155