prot_D-mesarthrocarpus_Contig10455.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10455.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10455.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length166
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: D7G1I2_ECTSI (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I2_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.150e-35
Identity = 88/176 (50.00%), Postives = 103/176 (58.52%), Query Frame = 0
Query:    1 LPQGNLETALKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRSIEIRPAAPAYVAWALLEDSLATRLVHSDGYSAVYCPAKYSTEAGGGVGGVVGLHGETGAAAGAEIDKGGAGAGRKEEGHGG-----------RELAGIDGHEEARRLFGLGLRADPTHGPLYNAFG 165
            + +GNLETALKI +AATARFPWD+ LLQT GTV G+LGR  EA ECYRRSI + PAAPAYVAWAL+   LA R   +          KY   AG  V   VG   + G   G   D    G+G   + + G            E  G   +EEARRLF LG+ ADPTHGPLYNA+G
Sbjct:  420 IKEGNLETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGPKYGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTADENDGXXXXEGGVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYG 595          
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.290e-28
Identity = 80/167 (47.90%), Postives = 93/167 (55.69%), Query Frame = 0
Query:   10 LKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRSIEIRPAAPAYVAWALLEDSLATRLVHSDGYSAVYCPAKYSTEAGGGVGGVVGLHGETGAAAGAEIDK--GGAGAGRKEEGHGGRELAGID---------GHEEARRLFGLGLRADPTHGPLYNAFG 165
            LKI +AATARFPWD+ LLQT GTV G+LGR  EA ECYRRSI + PAAPAYVAWAL+   LA R   +          +    AG  V   VG   + G   G   D   GG+G    E         G+           +EEARRLF LG+ ADPTHGPLYNA+G
Sbjct:  508 LKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKETAAGQEQDVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTAAEXXXXXXXXXGVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYG 674          
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: A0A7S2DH37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH37_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.900e-12
Identity = 51/161 (31.68%), Postives = 76/161 (47.20%), Query Frame = 0
Query:    5 NLETALKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRSIEIRPAAPAYVAWALLEDSLATRLVHSDGYSAVYCPAKYSTEAGGGVGGVVGLHGETGAAAGAEIDKGGAGAGRKEEGHGGRELAGIDGHEEARRLFGLGLRADPTHGPLYNAFG 165
            NL  ++++ + A  +FP D SL QT GTV  R G    AR+ ++RS  ++P+APAYVAW L+E+     ++                                               G K++G    ++  +    EARRLF LG++ADP+HGPLYNA+G
Sbjct:  241 NLNKSVELLEEAVEKFPADHSLHQTFGTVLERTGDIPRARKAFKRSTTLKPSAPAYVAWGLMEER--HHMIQ----------------------------------------------GEKQKG----KIRVV----EARRLFELGIKADPSHGPLYNAYG 345          
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: A0A835Z4V8_9STRA (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.540e-8
Identity = 47/126 (37.30%), Postives = 60/126 (47.62%), Query Frame = 0
Query:   47 YRRSIEIRPAAPAYVAWALLEDSLATRLVHSDGYSAVYCPAKYSTEAGGGVGGVV-------GLHGETGAAAGAEIDKGGAGAGRKEEGHGGRELAGIDGHEEARRLFGLGLRADPTHGPLYNAFG 165
            YR S +IRP APA+VAWALLED LA     +   +    P+  S E       ++       GL     A A A++++  A                      ARRLF LG+RADP HGPLYNA+G
Sbjct:  363 YRASTQIRPTAPAFVAWALLEDKLAAERAAAAXXATDLTPSPNSKEDDDATDAILTSTGKRLGLERARSAEADADVERCRA---------------------NARRLFELGIRADPKHGPLYNAYG 467          
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: R7Q4Y4_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y4_CHOCR)

HSP 1 Score: 55.1 bits (131), Expect = 9.500e-6
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    3 QGNLETALKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRSIEIRPAAPAYVAWALLED 68
            +G ++ A  I Q      P D +LLQ+ G ++ + G+   AR+ + +S+ ++PA PA+VAWALLED
Sbjct:  386 RGKVDEARSILQRGHMMHPKDPALLQSLGILEDKCGKTEVARKLFYKSVCVKPAGPAFVAWALLED 451          
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: A0A7S0P5C9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P5C9_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 6.990e-5
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    9 ALKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRSIEIRPAAPAYVAWALLEDS 69
            AL +   A   FP + SLLQT+G++  R G   +AR+ +  S+     APAYVAWALLE++
Sbjct:   56 ALAVVDEALDLFPQEGSLLQTRGSLLHRTGAVEDARQAFAASVRRGGGAPAYVAWALLEEA 116          
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Match: A0A2V3J326_9FLOR (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J326_9FLOR)

HSP 1 Score: 52.4 bits (124), Expect = 8.230e-5
Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 0
Query:    4 GNLETALKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRSIEIRPAAPAYVAWALL--------------EDSLATRLVHSDGYS 81
            G +  A K+ +      P D ++LQ+ GT++ R G  +EA+  + RS+  RP APA+VAWALL              E++L+T  +H   Y+
Sbjct:  578 GRVNEARKLLKKGHDCHPTDPAILQSLGTLEERCGNLDEAKRLFYRSVCARPIAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYN 669          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10455.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G1I2_ECTSI3.150e-3550.00PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A6H5L0Y9_9PHAE2.290e-2847.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2DH37_9STRA6.900e-1231.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z4V8_9STRA1.540e-837.30PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
R7Q4Y4_CHOCR9.500e-639.39TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S0P5C9_9EUKA6.990e-544.26Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A2V3J326_9FLOR8.230e-533.70PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..165
e-value: 3.0E-9
score: 38.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10455contigD-mesarthrocarpus_Contig10455:25..2787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10455.1.1mRNA_D-mesarthrocarpus_Contig10455.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10455 25..2787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10455.1.1 ID=prot_D-mesarthrocarpus_Contig10455.1.1|Name=mRNA_D-mesarthrocarpus_Contig10455.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=166bp
LPQGNLETALKITQAATARFPWDQSLLQTQGTVQGRLGRPNEARECYRRS
IEIRPAAPAYVAWALLEDSLATRLVHSDGYSAVYCPAKYSTEAGGGVGGV
VGLHGETGAAAGAEIDKGGAGAGRKEEGHGGRELAGIDGHEEARRLFGLG
LRADPTHGPLYNAFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf