prot_D-mesarthrocarpus_Contig10445.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10445.3.1
Unique Nameprot_D-mesarthrocarpus_Contig10445.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length173
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10445.3.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.750e-20
Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = 0 
Query:   34 PGGASTAG-DRFSTADLCRGPDSWGLSIRLLPHQRQALGWARALVARGLGGFISDDPGTGQTVTAAAAVAWVASSRVFVERERVRVY 119
            PG    AG + FS+ +L R PDSWG+++ LLPHQ +AL W RAL  RGLGG + DD GTG+TVTAAA VA VA+ R  VE ER  ++
Sbjct:  932 PGSNGVAGYEEFSSRNLSRAPDSWGMAVHLLPHQAKALSWIRALAGRGLGGVLCDDRGTGKTVTAAATVAMVAACRSVVETERTDIF 1018
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BLAST of mRNA_D-mesarthrocarpus_Contig10445.3.1 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.120e-19
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 0 
Query:   42 DRFSTADLCRGPDSWGLSIRLLPHQRQALGWARALVARGLGGFISDDPGTGQTVTAAAAVAWVASSRVFVERERVRVY 119
            + FS+ +L R PDSWG+++ LLPHQ +AL W RAL  RGLGG + DD GTG+TVTAAA VA VA+ R  VE ER  ++
Sbjct:  504 NEFSSRNLSRAPDSWGMAVHLLPHQEKALSWIRALAGRGLGGVLCDDRGTGKTVTAAATVAMVAACRSVVETERTDIF 581
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10445.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FME7_ECTSI4.750e-2056.32Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHX4_9PHAE2.120e-1957.69SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 45..122
e-value: 2.1E-6
score: 28.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..172
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 56..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10445contigD-mesarthrocarpus_Contig10445:2410..4225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10445.3.1mRNA_D-mesarthrocarpus_Contig10445.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10445 2410..4225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10445.3.1 ID=prot_D-mesarthrocarpus_Contig10445.3.1|Name=mRNA_D-mesarthrocarpus_Contig10445.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=173bp
QKILETATQGGVAMVVPASDNRTSEGRGVEGGAPGGASTAGDRFSTADLC
RGPDSWGLSIRLLPHQRQALGWARALVARGLGGFISDDPGTGQTVTAAAA
VAWVASSRVFVERERVRVYAEAARSEGQPETNHTAEGNAAADPPGLPAAG
SPTTVDGATAAAKGGQVNSFFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase