prot_D-mesarthrocarpus_Contig10445.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10445.2.1
Unique Nameprot_D-mesarthrocarpus_Contig10445.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length77
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10445.2.1 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 6.630e-14
Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:    7 PRPGLLAPPPQLVAVPACGLARWHMELALACPRLQVRVWEDWLAEE 52
            PRPG LAPPPQLV VP+  +ARWHMELA ACPRL ++VWE+W ++E
Sbjct:  643 PRPGSLAPPPQLVVVPSWAMARWHMELAQACPRLVIKVWEEWRSQE 688
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10445.2.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 6.700e-14
Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:    7 PRPGLLAPPPQLVAVPACGLARWHMELALACPRLQVRVWEDWLAEE 52
            PRPG LAPPPQLV VP+  +ARWHMELA ACPRL ++VWE+W ++E
Sbjct: 1080 PRPGSLAPPPQLVVVPSWAMARWHMELAQACPRLVIKVWEEWRSQE 1125
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10445.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHX4_9PHAE6.630e-1469.57SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
D7FME7_ECTSI6.700e-1469.57Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10445contigD-mesarthrocarpus_Contig10445:1569..1799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10445.2.1mRNA_D-mesarthrocarpus_Contig10445.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10445 1569..1799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10445.2.1 ID=prot_D-mesarthrocarpus_Contig10445.2.1|Name=mRNA_D-mesarthrocarpus_Contig10445.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=77bp
SPPPPCPRPGLLAPPPQLVAVPACGLARWHMELALACPRLQVRVWEDWLA
EEQRLRNDPGVSRVLGSCPAGLGTRLG
back to top