prot_D-mesarthrocarpus_Contig10303.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10303.2.1
Unique Nameprot_D-mesarthrocarpus_Contig10303.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length101
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 7.070e-37
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    9 QAAPSTNESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEHSAE 93
            QAAP+TNESLSAAALAAA PEKQKNMIGERLYPLI+EGQP LAGKITGMLLEMDNGELLHLLESP++L AKI+EALQVLSEH  E
Sbjct:  602 QAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQE 686          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A7R9W8W3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8W3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.360e-33
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0
Query:   15 NESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEHSAETAAA 97
            NE+L+A+ALA+A PE QKNMIGERLYPLIH  QP LAGKITGMLLEMDN ELLHLLESP+AL AKI EALQVL  H+A  A A
Sbjct:   36 NEALTASALASATPEMQKNMIGERLYPLIHHSQPDLAGKITGMLLEMDNSELLHLLESPDALNAKIQEALQVLEAHNAAQATA 118          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: K0RXK8_THAOC (PABC domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXK8_THAOC)

HSP 1 Score: 119 bits (299), Expect = 2.410e-32
Identity = 64/80 (80.00%), Postives = 68/80 (85.00%), Query Frame = 0
Query:   13 STNESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEHSA 92
            S NE L+ AALA+A PE QKNMIGERLYPLIH+ QP LAGKITGMLLEMDN ELLHLLESPEAL AKI EALQVL  H+A
Sbjct:   25 SANEQLTPAALASATPEIQKNMIGERLYPLIHQTQPDLAGKITGMLLEMDNSELLHLLESPEALGAKIQEALQVLDAHNA 104          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A7R9U8R0_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8R0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.370e-31
Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    7 PLQAAPSTNESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEH 90
            P   AP    +L+ +ALAAA+P +QKNMIGERLYPLI   QPQLAGKITGMLLEMDN ELLHLLESP+ALQAKI+EALQVL +H
Sbjct:   41 PQGVAPPVEAALTPSALAAASPTQQKNMIGERLYPLIMGTQPQLAGKITGMLLEMDNSELLHLLESPDALQAKINEALQVLEKH 124          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: G4ZHX5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZHX5_PHYSP)

HSP 1 Score: 120 bits (300), Expect = 6.610e-31
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query:   16 ESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEH 90
            E L++AALAAA+PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKISEAL VL  H
Sbjct:  241 EPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKISEALAVLEAH 315          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A6T8JM21_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JM21_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.560e-30
Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 0
Query:   15 NESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEHSA 92
            NESL+A+ALA+A PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDN ELLHLLESP+AL AKISEALQVL  H+A
Sbjct:  660 NESLTASALASATPEMQKNMIGERLYPLIHASQPELAGKITGMLLEMDNSELLHLLESPDALNAKISEALQVLEAHNA 737          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.940e-30
Identity = 63/75 (84.00%), Postives = 69/75 (92.00%), Query Frame = 0
Query:   16 ESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEH 90
            ESL+A ALAAA+PE QKNMIGERLYPLIHE QP+LAGKITGMLLEMDNGELLHLLESP++L+AKI EALQVL  H
Sbjct:  593 ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A7S2RUB9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RUB9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.260e-30
Identity = 60/79 (75.95%), Postives = 70/79 (88.61%), Query Frame = 0
Query:   12 PSTNESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEH 90
            P+ +E L+AAALA+A+P+ QKNMIGERLYPLIH  +P+LAGKITGMLLEMDN ELLHLLESP+AL+AKI EALQVL  H
Sbjct:  227 PAPHEPLTAAALASASPDVQKNMIGERLYPLIHHSEPELAGKITGMLLEMDNSELLHLLESPDALKAKIGEALQVLENH 305          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A6U3DAI6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3DAI6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.790e-30
Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    1 PPLVRLPLQAAPST---NESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEHSA 92
            PP    P QAAP+      +L+A+ALA+A PE QKNMIGERLYPLIH+ QP LAGKITGMLLEMDN ELLHLLESPEAL AKISEALQVL  H A
Sbjct:  601 PPQQSAPPQAAPAPMPHEGALTASALASATPEMQKNMIGERLYPLIHQSQPDLAGKITGMLLEMDNSELLHLLESPEALNAKISEALQVLEAHQA 695          
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Match: A0A7S1Y0F8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0F8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.640e-30
Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 0
Query:   22 ALAAAAPEKQKNMIGERLYPLIHEGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEH 90
            ALAAA+P  QKNMIGERLYPLI + QPQLAGKITGMLLEMDN ELLHLLESP+ALQAKI+EALQVL +H
Sbjct:   41 ALAAASPAAQKNMIGERLYPLIMQSQPQLAGKITGMLLEMDNSELLHLLESPDALQAKIAEALQVLEKH 109          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10303.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI7.070e-3788.24Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A7R9W8W3_9STRA2.360e-3377.11Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
K0RXK8_THAOC2.410e-3280.00PABC domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7R9U8R0_9STRA6.370e-3173.81Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
G4ZHX5_PHYSP6.610e-3184.00Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6T8JM21_9STRA1.560e-3082.05Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A835YVH9_9STRA1.940e-3084.00Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A7S2RUB9_9STRA2.260e-3075.95Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6U3DAI6_9STRA2.790e-3072.63Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1Y0F8_9STRA4.640e-3084.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinSMARTSM00517poly_2coord: 27..90
e-value: 3.1E-35
score: 133.1
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPFAMPF00658PABPcoord: 23..87
e-value: 1.2E-30
score: 105.4
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPROSITEPS51309PABCcoord: 15..92
score: 21.15398
NoneNo IPR availableGENE3D1.10.1900.10coord: 12..100
e-value: 1.2E-34
score: 120.2
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 14..91
NoneNo IPR availablePANTHERPTHR24012:SF805POLYADENYLATE-BINDING PROTEINcoord: 14..91
IPR036053PABC (PABP) domainSUPERFAMILY63570PABC (PABP) domaincoord: 12..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10303contigD-mesarthrocarpus_Contig10303:2153..2760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10303.2.1mRNA_D-mesarthrocarpus_Contig10303.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10303 2153..2760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10303.2.1 ID=prot_D-mesarthrocarpus_Contig10303.2.1|Name=mRNA_D-mesarthrocarpus_Contig10303.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp
PPLVRLPLQAAPSTNESLSAAALAAAAPEKQKNMIGERLYPLIHEGQPQL
AGKITGMLLEMDNGELLHLLESPEALQAKISEALQVLSEHSAETAAAVHS
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002004PABP_HYD
IPR036053PABP-dom