Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10198.2.1 vs. uniprot
Match:
A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)
HSP 1 Score: 78.2 bits (191), Expect = 1.350e-13
Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = 0
Query: 2 VVACEVQDFSNFLRVPMVSNALLKWDATTSYPPHLSPSQEGKAADKTGGGAGSVGPDSSAMEETLLSPHRPALSVEVEVHDAVLSISATAIQCLDQCIGEMKK 104
VVA +VQDFSNFLR+P++S+A +K D +TS GG G + +A E+LLSP RP S V+V+ AV+S+S TA+QC+DQCI E+ +
Sbjct: 2676 VVAADVQDFSNFLRLPLLSHAAVKLDVSTS---------------SVRGGTGRM----AAEGESLLSPFRPIASGAVDVNGAVVSMSVTAMQCIDQCIAELTR 2759
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.2.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M V V A C E V Q D F S N F L R V P M V S N A L L K W D A T T S Y P P H L S P S Q E G K A A D K T G G G A G S V G P D S S A M E E T L L S P H R P A L S V E V E V H D A V L S I S A T A I Q C L D Q C I G E M K K G S P S S L L A A A L R P A T Q G G M P L P A P A A T S A A L A S T S L A R A P D D R A A D L D V A V T P P H E T P P H A S V S Q A E G K V 20 40 60 80 100 120 140 160 Expect = 1.35e-13 / Id = 44.66 Sequence A0A6H5KKG1_9PHAE
Match Name E-value Identity Description
A0A6H5KKG1_9PHAE 1.350e-13 44.66 VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M V V A C E V Q D F S N F L R V P M V S N A L L K W D A T T S Y P P H L S P S Q E G K A A D K T G G G A G S V G P D S S A M E E T L L S P H R P A L S V E V E V H D A V L S I S A T A I Q C L D Q C I G E M K K G S P S S L L A A A L R P A T Q G G M P L P A P A A T S A A L A S T S L A R A P D D R A A D L D V A V T P P H E T P P H A S V S Q A E G K V 20 40 60 80 100 120 140 160 Score = Score = Score = Sequence Coil mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 167..174 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 34..66 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 136..174
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_D-mesarthrocarpus_Contig10198.2.1 ID=prot_D-mesarthrocarpus_Contig10198.2.1|Name=mRNA_D-mesarthrocarpus_Contig10198.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=174bp back to top