Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10198.1.1 vs. uniprot
Match:
A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)
HSP 1 Score: 58.9 bits (141), Expect = 9.080e-7
Identity = 45/123 (36.59%), Postives = 58/123 (47.15%), Query Frame = 0
Query: 93 EPSHPTLARVWRIRWRVPVWVQ-GPGGAGVKLSAADTHLVSSVLMAQLMVCSTPR---TATGRLSVTLGAQRVRVGLLTD-------------QAPSSSH---------LQPEEILRVVLTDV 189
EPS P LAR WR+ WRVP W++ GAG SS L+ L + S+P +S TL AQR+ + LLT+ AP S +QPEEI+RVV+ DV
Sbjct: 2532 EPSQPILARTWRLSWRVPSWLRFKAAGAGGAPKPPAISAWSSALLRTLSIRSSPSGPVVGPSYVSATLVAQRLTLALLTEGGAISRSSSXXXXXAPVSPSRRREGLGVFVQPEEIVRVVIADV 2654
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.1.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
R G A E E G V W L L V G E A G A R I P L E T V E V E L S C L D P V T K R F E L A T R F T V H C D S I W Q P V T R F P C P K P E S P S T A A S A V A S P P P L T T P T L G T S N T P S M C E P S H P T L A R V W R I R W R V P V W V Q G P G G A G V K L S A A D T H L V S S V L M A Q L M V C S T P R T A T G R L S V T L G A Q R V R V G L L T D Q A P S S S H L Q P E E I L R V V L T D V E 20 40 60 80 100 120 140 160 180 Expect = 9.08e-7 / Id = 36.59 Sequence A0A6H5KKG1_9PHAE
Match Name E-value Identity Description
A0A6H5KKG1_9PHAE 9.080e-7 36.59 VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
R G A E E G V W L L V G E A G A R I P L E T V E V E L S C L D P V T K R F E L A T R F T V H C D S I W Q P V T R F P C P K P E S P S T A A S A V A S P P P L T T P T L G T S N T P S M C E P S H P T L A R V W R I R W R V P V W V Q G P G G A G V K L S A A D T H L V S S V L M A Q L M V C S T P R T A T G R L S V T L G A Q R V R V G L L T D Q A P S S S H L Q P E E I L R V V L T D V E 20 40 60 80 100 120 140 160 180 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 67..87 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 65..87
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_D-mesarthrocarpus_Contig10198.1.1 ID=prot_D-mesarthrocarpus_Contig10198.1.1|Name=mRNA_D-mesarthrocarpus_Contig10198.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=190bp back to top