prot_D-mesarthrocarpus_Contig10184.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10184.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10184.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length90
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10184.1.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI)

HSP 1 Score: 53.5 bits (127), Expect = 3.170e-6
Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 0 
Query:   21 VATGPDELSTRREASAGEDADKWQEAMDMEMEGQWDKGTFSDDCTPPGRKPVKTRFVYKIKRTADRAIEQ 90
            +  GPD+  T +EA   E  D WQ+AM  E +   +  T+     PPGRKP+K ++V+K KR ++  +E+
Sbjct:  781 MVIGPDDPITLQEALESEACDSWQQAMRNEYDALLENKTWDLVDLPPGRKPLKCKWVFKTKRDSNNDVER 850
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10184.1.1 vs. uniprot
Match: A0A0J7KH47_LASNI (Integrase core domain protein (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KH47_LASNI)

HSP 1 Score: 50.4 bits (119), Expect = 3.630e-5
Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:   27 ELSTRREASAGEDADKWQEAMDMEMEGQWDKGTFSDDCTPPGRKPVKTRFVYKIKRTADRAI 88
            E  T  EA    +ADKW+ A++ E+E   + GT+     PPG+KP+ T++V+K+K T   A+
Sbjct:  181 EPVTFAEAMRSSEADKWKCAIEEELEAHENNGTWKIVPFPPGKKPIDTKWVFKLKNTVGGAV 242
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10184.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0J7NHJ8_LASNI3.170e-637.14Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A0J7KH47_LASNI3.630e-538.71Integrase core domain protein (Fragment) n=1 Tax=L... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10184contigD-mesarthrocarpus_Contig10184:4197..4466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10184.1.1mRNA_D-mesarthrocarpus_Contig10184.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10184 4197..4466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10184.1.1 ID=prot_D-mesarthrocarpus_Contig10184.1.1|Name=mRNA_D-mesarthrocarpus_Contig10184.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=90bp
QQPRLRTSHDAFCILGLVGEVATGPDELSTRREASAGEDADKWQEAMDME
MEGQWDKGTFSDDCTPPGRKPVKTRFVYKIKRTADRAIEQ
back to top