Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Match:
D7FQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ90_ECTSI)
HSP 1 Score: 120 bits (301), Expect = 3.840e-29
Identity = 53/77 (68.83%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 PSLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQ-VTGARPNKVSYDLVMQACGHGGEWELGVALLEDMREV 76
P+ +++PDV+S+TSAIHAC+GP GNWEKAY QLLD MWQ GA+P+K +YDLV+QACGHGGEWELGV L++DMR++
Sbjct: 2 PAAKVKPDVISFTSAIHACAGPTGNWEKAY-QLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDL 77
BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Match:
A0A6H5L2A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A2_9PHAE)
HSP 1 Score: 90.5 bits (223), Expect = 1.320e-18
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 1 PSLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQ-VTGARPNKVSYDLVMQACGHGGEWELGVALLEDMREV 76
P+ +++ +GP GNWEKAY QLLD MWQ GA+P+K +YDLV+QACGHGGEWELGV L++DMR++
Sbjct: 419 PAAKVKXXXXXXXXXXXXXAGPTGNWEKAY-QLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDL 494
BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Match:
A0A7S0LID2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LID2_9EUKA)
HSP 1 Score: 52.8 bits (125), Expect = 8.090e-6
Identity = 27/63 (42.86%), Postives = 35/63 (55.56%), Query Frame = 0
Query: 2 SLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQVTGARPNKVSYDLVMQACGHGGEWE 64
S ++ PDVVSY +AI ACS + +W +LL +M G RPN +Y AC GG WE
Sbjct: 45 SPRMPPDVVSYATAISACSRDSAHWRTGV-ELLRQM-DAVGVRPNVFAYASAASACATGGAWE 105
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
P S L Q L Q P D V V S Y T S A I H A C S G P N G N W E K A Y Y Q L L D K M W Q V T G A R P N K V S Y D L V M Q A C G H G G E W E L G V A L L E D M R E V G A T P D L Q S F N I A V S A C A R C G E W K E A F L L V G L M R R A G V V P D A F T Y S A L I H G * 10 20 30 40 50 60 70 80 90 100 110 120 Expect = 3.84e-29 / Id = 68.83 Expect = 1.32e-18 / Id = 54.55 Expect = 8.09e-6 / Id = 42.86 Sequence D7FQ90_ECTSI A0A6H5L2A2_9PHAE A0A7S0LID2_9EUKA back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
P S L Q L Q P D V V S Y T S A I H A C S G P N G N W E K A Y Y Q L L D K M W Q V T G A R P N K V S Y D L V M Q A C G H G G E W E L G V A L L E D M R E V G A T P D L Q S F N I A V S A C A R C G E W K E A F L L V G L M R R A G V V P D A F T Y S A L I H G * 10 20 30 40 50 60 70 80 90 100 110 120 Expect = 3.0E-32 / Score = 114.2 Expect = 2.7E-5 / Score = 22.1 Expect = 6.5E-8 / Score = 30.3 Expect = 1.3E-8 / Score = 34.8 Expect = 8.4E-5 / Score = 22.6 Score = 11.290196 Score = 10.226951 Score = Sequence G3DSA:1.25.40.10 TIGR00756 PF13041 PF13812 PS51375 PS51375 PTHR47942
IPR Term IPR Description Source Source Term Source Description Alignment
IPR011990 Tetratricopeptide-like helical domain superfamily GENE3D 1.25.40.10 Tetratricopeptide repeat domain coord: 1..126 IPR002885 Pentatricopeptide repeat TIGRFAM TIGR00756 TIGR00756 coord: 48..81 IPR002885 Pentatricopeptide repeat PFAM PF13041 PPR_2 coord: 84..126 IPR002885 Pentatricopeptide repeat PFAM PF13812 PPR_3 coord: 4..58 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 81..115 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 46..80 None No IPR available PANTHER PTHR47942 TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED coord: 6..126
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_D-mesarthrocarpus_Contig10152.1.1 ID=prot_D-mesarthrocarpus_Contig10152.1.1|Name=mRNA_D-mesarthrocarpus_Contig10152.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=127bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR011990 TPR-like_helical_dom_sf IPR002885 Pentatricopeptide_repeat