Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1001.2.1 vs. uniprot
Match:
D7FUM4_ECTSI (HTH_OrfB_IS605 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM4_ECTSI)
HSP 1 Score: 189 bits (481), Expect = 1.250e-54
Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 0
Query: 88 GHRTIELLPTDEQRQTLQKWFGVVRWTHNRAVDALRRDPEASKSSLWAAVAAAESDHSWVSAVPRAVRDDTVGELWAT-----------AAACGRV----------NEDALKYRTRKDRLEKVIIRASGFLGGVPYPEYFGRTPLAASELLPDRLPGDAILVRNCERFFLCV 238
G++T+ELLPT +QRQTLQKWFGVVRW HNRAVDALR D S +SL AAVA +ES+H W +AVP A+RD TV +L AAA G ALKYRTRKDRLE++++RA GF G+PYP+YFG PLA+S +PDRLP DAILVR+ ERF+LC+
Sbjct: 226 GYQTLELLPTAQQRQTLQKWFGVVRWIHNRAVDALRVDSSVSATSLRAAVAESESEHEWAAAVPLAIRDATVAQLVGALHLAQRSAEVAAAATGEAVMAEPLGTAAQNKALKYRTRKDRLEQIVLRADGFQYGIPYPDYFGYAPLASSVPIPDRLPSDAILVRSTERFYLCI 397
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1001.2.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M S H S G L M D F W S E P W T F E T W S L W S S Q G A A S A G L S I L N W K K G E S S P W S S S T W A P P Q G A A P L R E T L R A S N G G R Q G A R H P F G R E C Q I A P S T G H R T I E L L P T D E Q R Q T L Q K W F G V V R W T H N R A V D A L R R D P E A S K S S L W A A V A A A E S D H S W V S A V P R A V R D D T V G E L W A T A A A C G R V N E D A L K Y R T R K D R L E K V I I R A S G F L G G V P Y P E Y F G R T P L A A S E L L P D R L P G D A I L V R N C E R F F L C V P N S W K D S P W L S * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.25e-54 / Id = 56.98 Sequence D7FUM4_ECTSI
Match Name E-value Identity Description
D7FUM4_ECTSI 1.250e-54 56.98 HTH_OrfB_IS605 domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M S H S G L M D F W S E P W T F E T W S L W S S Q G A A S A G L S I L N W K K G E S S P W S S S T W A P P Q G A A P L R E T L R A S N G G R Q G A R H P F G R E C Q I A P S T G H R T I E L L P T D E Q R Q T L Q K W F G V V R W T H N R A V D A L R R D P E A S K S S L W A A V A A A E S D H S W V S A V P R A V R D D T V G E L W A T A A A C G R V N E D A L K Y R T R K D R L E K V I I R A S G F L G G V P Y P E Y F G R T P L A A S E L L P D R L P G D A I L V R N C E R F F L C V P N S W K D S P W L S * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 8.7E-8 / Score = 31.5 Sequence PF12323
IPR Term IPR Description Source Source Term Source Description Alignment
IPR021027 Transposase, putative, helix-turn-helix domain PFAM PF12323 HTH_OrfB_IS605 coord: 91..120
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_D-mesarthrocarpus_Contig1001.2.1 ID=prot_D-mesarthrocarpus_Contig1001.2.1|Name=mRNA_D-mesarthrocarpus_Contig1001.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=250bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR021027 Transposase_put_HTH