mRNA_D-mesarthrocarpus_Contig1117.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: D7FT81_ECTSI (RPOL4c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT81_ECTSI) HSP 1 Score: 175 bits (444), Expect = 9.780e-54 Identity = 97/148 (65.54%), Postives = 116/148 (78.38%), Query Frame = 1
Query: 1 DMEENANTLQFGAEF--EAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQFEAFHDGEVVKLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQKQAQSQFSS 438
D EENAN LQFG E + +SCLSNAEV+VVLEKQ+ YE KDINVTPAF+KTM+Y KR+GG G + K M AT++LRE L QFE FH+GE ++L QFE+ Q+ANLMQADSEVEE +ALIPSL R EED+ENILAIV+K S+ S
Sbjct: 5 DDEENANLLQFGPEHAKDDMSCLSNAEVSVVLEKQRINYEEKDINVTPAFSKTMSYVKRFGGLGGSVK-MTATSELREALQQFETFHEGESIRLHQFEIMQVANLMQADSEVEEVLALIPSLGARLTEEDLENILAIVRKHQHSRLYS 151
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A3M6VV57_9STRA (RPOL4c domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VV57_9STRA) HSP 1 Score: 110 bits (274), Expect = 6.510e-28 Identity = 69/145 (47.59%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQ--FEAFHDGEVV--KLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQKQAQSQF 432
E+A L G +F +CLSNAEVAV+LEKQK YE ++ +T F KT +Y +R+ G+ D + T+LRE L F+ DGE V +LE+FE+A L+NL EVEEA+ALIPSL RF E++IE IL IV + A F
Sbjct: 12 EDAAELNLGGDFRNETCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFQREEDGETVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLQKRFAEDEIEEILGIVSRTAARMF 154
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: H3GHD4_PHYRM (RPOL4c domain-containing protein n=23 Tax=Oomycota TaxID=4762 RepID=H3GHD4_PHYRM) HSP 1 Score: 107 bits (267), Expect = 7.400e-27 Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQ--FEAFHDGEVV--KLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQKQAQSQF 432
E+A L G +F +CLSNAEVAV+LEKQK YE ++ +T F KT +Y +R+ G+ D + T+LRE L F+ +GE V +LE+FE+A L+NL EVEEA+ALIPSL RF E++IE IL IV + A F
Sbjct: 12 EDAAELNLGDDFRNETCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFQREEEGETVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLHKRFAEDEIEEILGIVSRTAARMF 154
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A8K1FR52_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR52_PYTOL) HSP 1 Score: 107 bits (267), Expect = 7.400e-27 Identity = 66/141 (46.81%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQ--FEAFHDGEV--VKLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQKQA 420
E+A L G +F +CLSNAEVAV+LEKQK YE ++ +T F KT +Y +R+ G+ D + T+LRE L F+ DG+V V+LE+FE+A L+NL EVEE++AL+PSL RF E++IE IL IV + A
Sbjct: 12 EDAAELNLGDDFRHETCLSNAEVAVILEKQKSDYENQEKQLTGVFQKTYSYVQRFSGTKDPVSNQASVTELREALMSLAFQREEDGQVTEVRLEEFEIACLSNLNP--EEVEESVALVPSLQKRFAEDEIEEILGIVSRTA 150
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A835YSR6_9STRA (HRDC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR6_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.930e-26 Identity = 63/135 (46.67%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQFEAFHDGEVVKLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQK 414
EN NTL+FG FE + CL++ EV +L T + D+ T A+ KT+ + KR+G + D K + TT+LR+ L FE D L +E+ L NLMQADS V+EAIALIPSLS +F EEDIE +L I++K
Sbjct: 10 ENVNTLKFGPGFEEIQCLTHTEVYQIL-----TSKTHDVQRTQAYTKTIEHVKRFGTADDEKHAI--TTELRQALETFERDTDQGTETLHSYEIVSLCNLMQADSTVDEAIALIPSLSRKFKEEDIEALLDIIRK 137
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: F0W0U0_9STRA (Uncharacterized protein AlNc14C5G725 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0U0_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.190e-25 Identity = 66/141 (46.81%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQ--FEAFHDGEVV--KLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQKQA 420
E+A L G +F +CLSNAEVAV+LEKQK+ YE ++ +T F KT +Y +R+ G+ D + T+LRE L F D VV +LE+FE++ L+NL EVEEA++LIPSLS R+ EE+IE IL IV ++A
Sbjct: 12 EDAAELNLGEDFRDETCLSNAEVAVILEKQKQDYENQEKQLTNVFQKTYSYVQRFSGTKDPVSNQASVTELREALMSLVFNREIDERVVEIRLEEFEISCLSNLNP--EEVEEAVSLIPSLSKRYAEEEIEEILGIVSRKA 150
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A067CZ22_SAPPC (RPOL4c domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CZ22_SAPPC) HSP 1 Score: 102 bits (253), Expect = 1.060e-24 Identity = 62/142 (43.66%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQFEAFHDGE-------VVKLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQK 414
E+A L G +F+ +CLSNAEVAV+LEKQK YE ++ +T F KT +Y +R+ G+ D + T+LRE L +E + ++LE+FE+A L+NL E EEA+ALIPSL RF E+DIE IL+I+ +
Sbjct: 13 EDAAELILGEDFQGETCLSNAEVAVILEKQKSDYESQEKTLTNVFQKTYSYVQRFSGTKDPVSNQASVTELREALITYEFSREHPDDPSQTVEIRLEEFEIACLSNLNP--EEPEEAMALIPSLQKRFTEDDIEEILSIIAR 152
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A024TL56_9STRA (RPOL4c domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TL56_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.230e-24 Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQFEAFHDGE-------VVKLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQK 414
E+A L G +F+ +CLSNAEVAV+LEKQK YE + +T F KT +Y +R+ G+ D + T+LRE L +E + V+LE+FE+A L+NL E EEA+ALIPSL+ +F EEDI+ IL I+ +
Sbjct: 15 EDAAELNLGEDFQQETCLSNAEVAVILEKQKSDYESSEKPLTSVFQKTYSYVQRFSGTKDPVANQASVTELREALITYEFTRESPDDPSQAIEVRLEEFEIACLSNLNP--EEPEEAMALIPSLNKKFTEEDIDEILQIIAR 154
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A484E841_BRELC (RPOL4c domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E841_BRELC) HSP 1 Score: 100 bits (249), Expect = 5.220e-24 Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQ--------------FEAFHDGEVV--KLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQKQAQSQF 432
E+A L G +F +CLSNAEVAV+LEKQK YE ++ +T F KT +YA+R+ G+ D + T+LRE + F+ D +V +LE+FE+A L+NL EVEEA+ALIPSL RF E++IE IL IV + A F
Sbjct: 12 EDAAELNLGDDFRNETCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYAQRFSGTKDPVANQASVTELREYVANSSSIVHKVALMSLVFQREEDSGMVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLQKRFAEDEIEEILGIVSRTAARMF 166
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Match: A0A3F2S3S1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3S1_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.120e-23 Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 10 ENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTMAYAKRYGGSGDAKKLMMATTQLREDLTQ--FEAFHDGEVV--KLEQFEMAQLANLMQADSEVEEAIALIPSLSTRFNEEDIENILAIVQK-QAQS 426
E+A L G +F +CLSNAEVAV+LEKQK YE ++ +T F KT +Y +R+ G+ D + T+LRE L F+ +GE V +LE+FE+A L+NL EVEEA+ALIPSL RF E++IE IL IV QAQ+
Sbjct: 12 EDAAELNLGDDFRNETCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTYSYVQRFSGTKDPVANQASVTELREALMSLAFQREEEGEKVEYRLEEFEIACLSNLNP--EEVEEAVALIPSLHKRFAEDEIEEILGIVSPVQAQT 153 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1117.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1117.2.1 >prot_D-mesarthrocarpus_Contig1117.2.1 ID=prot_D-mesarthrocarpus_Contig1117.2.1|Name=mRNA_D-mesarthrocarpus_Contig1117.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=148bp MEENANTLQFGAEFEAVSCLSNAEVAVVLEKQKETYEMKDINVTPAFAKTback to top mRNA from alignment at D-mesarthrocarpus_Contig1117:5807..7962- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1117.2.1 ID=mRNA_D-mesarthrocarpus_Contig1117.2.1|Name=mRNA_D-mesarthrocarpus_Contig1117.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2156bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1117:5807..7962- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1117:5807..7962- >mRNA_D-mesarthrocarpus_Contig1117.2.1 ID=mRNA_D-mesarthrocarpus_Contig1117.2.1|Name=mRNA_D-mesarthrocarpus_Contig1117.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=444bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1117:5807..7962- (Discosporangium mesarthrocarpum MT17_79)back to top |