prot_D-dichotoma_M_contig969.20379.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig969.20379.1
Unique Nameprot_D-dichotoma_M_contig969.20379.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length109
Homology
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A6H5KLE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.410e-25
Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAA-LPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            EP SY  A  S    IW  A+  EF GL+   TF  A  +P+G   I A+W+Y WKAN  G++ + KARLVA+GF Q+ G+DY +TFSPT  ++SIR++V  A + D  L
Sbjct:   14 EPSSYNEARQSKYSSIWDKAISAEFGGLLRAGTFALAVKIPIGCNVIDARWVYKWKANETGKILKAKARLVAKGFKQKHGVDYFETFSPTAHAASIRLLVALACKYDLEL 123          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: UPI00080A3428 (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Phaseolus angularis TaxID=3914 RepID=UPI00080A3428)

HSP 1 Score: 100 bits (249), Expect = 5.170e-25
Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            EPQ+Y  A    +K  W +AM+RE + L DN+T+    LP G+ PI  KW+Y  K    G + R KARLVA+G+ Q+EG+DYLDTFSP    +++R+++  A   +W L
Sbjct:    8 EPQTYNEA---KDKREWIEAMQREIKALQDNNTWFLTQLPSGKTPIGCKWVYKTKFRADGSIERHKARLVAKGYTQQEGIDYLDTFSPIAKLTTVRLLIALAASNNWFL 113          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 98.6 bits (244), Expect = 4.810e-24
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDW 107
            +P++   A TSP+ + W  AM  E + L  N+T++    P GRK +  KW++  K N  G+V R KARLVARG+ Q EG+DY +TFSP   + SIR ++  ++++DW
Sbjct:   30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLLAFSVEQDW 136          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 6.890e-24
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    2 PQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            P++Y  A   P+  IW +A R+EF GL    TFE      G   I+AKW+YSWK +  G   R KARLVARGF QREG+D+ +TFSP P  +SIR++   A   DW L
Sbjct: 1251 PETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEER----GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDL 1354          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A251VDD9_HELAN (Putative ribonuclease H-like domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VDD9_HELAN)

HSP 1 Score: 103 bits (258), Expect = 1.280e-23
Identity = 47/109 (43.12%), Postives = 72/109 (66.06%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            EP+SY+ A + PN   W  AM  E + L  N+T++   LP+GRKPI  KW++  K    GE+ R KARLVA+G+ Q+EG+D+ +TFSP     ++R I++ A++++W L
Sbjct:  915 EPRSYKEAVSDPN---WVRAMNEEMEALHKNNTWQLVDLPLGRKPIGCKWVFKIKYKSTGEIERYKARLVAKGYSQKEGIDFEETFSPVVKMVTVRCIISLAVEKNWPL 1020          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.290e-23
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    2 PQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDW 107
            P++Y  A   P+  IW +A R+EF GL    TFE      G   I+AKW+YSWK +  G   R KARLVARGF QREG+D+ +TFSP P  +SIR++   A   DW
Sbjct: 1369 PETYGEAHAGPHHHIWTNAERKEFFGLNAVGTFEEQR---GTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDW 1471          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A6V7QA77_ANACO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QA77_ANACO)

HSP 1 Score: 96.3 bits (238), Expect = 1.340e-23
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            EP +Y  A        W +AM+ E Q L +N+T+    LP G KPI  KW++  K N  G V R KARL+A+GF QREG+DY +TF+P    +++R ++  A  R+W L
Sbjct:    3 EPDTYEQASQDSK---WVEAMQAELQALEENNTWTMVPLPPGHKPIGCKWVFKIKYNSNGTVERYKARLIAKGFTQREGIDYTETFTPVAKLTTVRCLLAVAAVRNWRL 108          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.260e-23
Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAA-LPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSA 102
            EP SY+ A  S + ++W  AM  EF+GL+   TF  A  +P+G   I A+W++ WKA+  G++ + KARLVA+GF Q+ G+DYL TFSPT  ++SIR++V  A
Sbjct:  166 EPDSYQEARQSKHAEVWDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALA 268          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: UPI000CD7F364 (uncharacterized protein LOC111888482 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD7F364)

HSP 1 Score: 103 bits (256), Expect = 2.350e-23
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            EP+ Y+ A T PN   W  AM  E + L  N+T+E   LP  RKPI  KW++  K    GEV R KARLVA+G+ QREG+D+ +TFSP     ++R+IV+ ++Q  W L
Sbjct:  793 EPKDYKEALTDPN---WVKAMNEEMEALHRNNTWEITCLPKNRKPIGCKWVFKIKYKSNGEVERYKARLVAKGYNQREGIDFEETFSPVAKIVTVRIIVSLSIQNSWPL 898          
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Match: A0A438HK87_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HK87_VITVI)

HSP 1 Score: 96.7 bits (239), Expect = 2.460e-23
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKWIYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVTSALQRDWTL 109
            +P +++ A  S N   W +AM  E++ + DN  +E   LPVG KPI  KWI+  K +  G V R KARLVA+GF Q+EG+D+ +TFSP     S R+I+      D  L
Sbjct:   35 DPINFQQAMKSSNSQKWIEAMNEEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLEL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig969.20379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLE6_9PHAE4.410e-2546.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00080A34285.170e-2544.04uncharacterized mitochondrial protein AtMg00820-li... [more]
UPI0015A81C6A4.810e-2442.06uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A6H5KBJ6_9PHAE6.890e-2448.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A251VDD9_HELAN1.280e-2343.12Putative ribonuclease H-like domain-containing pro... [more]
A0A6H5KAC2_9PHAE1.290e-2348.11Integrase catalytic domain-containing protein n=2 ... [more]
A0A6V7QA77_ANACO1.340e-2342.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPV1_9PHAE2.260e-2346.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000CD7F3642.350e-2345.87uncharacterized protein LOC111888482 n=1 Tax=Lactu... [more]
A0A438HK87_VITVI2.460e-2342.20Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 33..108
e-value: 6.2E-16
score: 58.8
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 6..108
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig969contigD-dichotoma_M_contig969:256466..256792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig969.20379.1mRNA_D-dichotoma_M_contig969.20379.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig969 256466..256792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig969.20379.1 ID=prot_D-dichotoma_M_contig969.20379.1|Name=mRNA_D-dichotoma_M_contig969.20379.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=109bp
EPQSYRVACTSPNKDIWADAMRREFQGLIDNDTFETAALPVGRKPITAKW
IYSWKANHLGEVTRGKARLVARGFMQREGLDYLDTFSPTPVSSSIRMIVT
SALQRDWTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like