prot_D-dichotoma_M_contig937.20097.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig937.20097.1
Unique Name	prot_D-dichotoma_M_contig937.20097.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	246

Homology

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BLAST of mRNA_D-dichotoma_M_contig937.20097.1 vs. uniprot
Match: A0A6H5KTQ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 7.560e-22
Identity = 78/206 (37.86%), Postives = 111/206 (53.88%), Query Frame = 0

Query:    1 MKLSVFVTILLPSVYAFVVP------SQLPSSGWVRYNSASNRNYPGHLAA-SSYSPEPAWSVTSFFQDILGTKPELGKMILPEADPAEEESRKRSMITQERKCMEGQLCSLIRIGGEHLSPKVGEHVKRLTHELEDMQANG-RCDMNSASLAGRWKLLYSSA-----GSSKCPDVQGTVEEISYVSENYRISHT-EKGVLRIYKR 192
            MKLSVF+ +LLPSV AFV P      + L              + P  + A    + E  WS+ + ++D++G      K+    A+    E +K+ ++ +ER+ +EGQL SLIRI G  +S K  + V+RL  ELE +Q N        + L G WKL+YS A     G  +  D   T+E ISYVSENYR+SH+ E+  LR+YKR
Sbjct:    1 MKLSVFL-VLLPSVSAFVSPKPVVLNNHLQRXXXXXXXXXXXSSTPTAVGAWKQANGEGPWSIATLWRDVVGPAMNKAKVDSTAAE-VYHELKKKVLVKKERQSLEGQLSSLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSRAACEGKGGGRGGDRLPTIEVISYVSENYRLSHSGEEDDLRVYKR 204

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BLAST of mRNA_D-dichotoma_M_contig937.20097.1 vs. uniprot
Match: D7G1W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W5_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 7.430e-10
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0

Query:  112 HLSPKVGEHVKRLTHELEDMQANG-RCDMNSASLAGRWKLLYSSA-----GSSKCPDVQGTVEEISYVSENYRISHT-EKGVLRIYKR 192
            HL  +  + V+RL  ELE +Q N        + L G WKL+YSSA     G  +  D   T+E+ISYVSENYR+SH+ E+  LR+YKR
Sbjct:    4 HLDSQKRDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKR 91

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig937.20097.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig937.20097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KTQ0_9PHAE	7.560e-22	37.86	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7G1W5_ECTSI	7.430e-10	45.45	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..245
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.855

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig937	contig	D-dichotoma_M_contig937:47030..50107 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig937.20097.1	mRNA_D-dichotoma_M_contig937.20097.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig937 45562..50204 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig937.20097.1 ID=prot_D-dichotoma_M_contig937.20097.1|Name=mRNA_D-dichotoma_M_contig937.20097.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=246bp
MKLSVFVTILLPSVYAFVVPSQLPSSGWVRYNSASNRNYPGHLAASSYSP
EPAWSVTSFFQDILGTKPELGKMILPEADPAEEESRKRSMITQERKCMEG
QLCSLIRIGGEHLSPKVGEHVKRLTHELEDMQANGRCDMNSASLAGRWKL
LYSSAGSSKCPDVQGTVEEISYVSENYRISHTEKGVLRIYKRSLKKMEDD
TANAGHLLWQGAGRDRKTTTATASRRSARKPKQPLRKRLFFGWRG*