mRNA_D-dichotoma_M_contig929.20035.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig929.20035.1
Unique NamemRNA_D-dichotoma_M_contig929.20035.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 6.230e-76
Identity = 136/276 (49.28%), Postives = 189/276 (68.48%), Query Frame = 2
Query:  272 SRIVFALITGVLMTSSSLALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDD-NCGFFLASLCPEGE-EGCGDE-DGGYEVVMPEP--PTPGDGYRVRISQRGMDRVRCSEDFFLLGS-DAGDLGS--GASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMS---EGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVLAAWSFA*TGSNGKSETPASSLAV 1066
            S +  A I G    +S+ AL V++P+   TV +G P+ V W G     RF+IDLHYCGSYS+CF++  CGF+LA++C EG+  GC  + D   +V  PEP      +GYR+RI++ G D  RCS+DF+L+ S DA  +G   G +I V APT+ ++A+AG+ YTVE++YDNGFG  +GRFKIDLY +   +G GDCGTW TS+CDKP+ GC D+ GDYNVVIP  +  G Y+IRVGL GDD+++ACS +F+V+AA + A  G+ G     A+SL++
Sbjct:    7 SLVALAGILGHTTITSTEALQVLTPAVAETVVSGRPYIVSWNGASADDRFEIDLHYCGSYSYCFEEAECGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGSDTYRCSDDFYLMSSADAPAVGEDGGPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVVAAAADA-AGAAGLWVDSATSLSL 281          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 5.070e-74
Identity = 119/232 (51.29%), Postives = 167/232 (71.98%), Query Frame = 2
Query:  326 ALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDD--NCGFFLASLCPEGEEGCG-DEDGGYEVVMPEPPT--PGDGYRVRISQRGMDRVRCSEDFFLLGS----DAGDLGSGASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDV 994
            AL V++P+   +VA+G P+ V W G     RF++DLHYCGSYSFCF +  +CGF++A++C E ++ C   +D   +V  PEP      +GYRVRIS+ G D  RCSEDF+L+ S    + G+ G G ++ V AP + ++A+AG+ YTVE++YDNGFG  +GRFKIDLY +EG GDCG+W TS+CDKP+ GC+D+ GDY+VVIP  +  G Y+IRVGL GDDS++ACS +F++
Sbjct:   24 ALRVLTPAVAESVASGRPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGTDNFRCSEDFYLVASADVLEFGEPG-GPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 6.350e-73
Identity = 125/245 (51.02%), Postives = 172/245 (70.20%), Query Frame = 2
Query:  287 ALITGVL--MTSSSLALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFD--DNCGFFLASLCPEGEEGCGDEDGGY-EVVMPEPPT--PGDGYRVRISQRGMDRVRCSEDFFLLGS-DAGDLGSGASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVL 997
            A +TG+L  + + + AL V++P+   TV +  P+ V W G     RF+IDLHYCGSYSFCF+  D CGF++ +LC EG++ C ++D    +V +PEP       GYRVRI + G +  RCS++F+L+ S DA D   G ++ V AP+S ++A+AG  YTVE++YDNGFG+  GRFKIDLY +EG GDCG W +S+CDKP+ GC DT GDY++VIP  +  G Y+IRVGL GDDSVFACS +F+V+
Sbjct:    9 AALTGMLGNIITDTEALRVLTPAVAETVVSDMPYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGTETFRCSDEFYLMSSADASDQ-DGPTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHAEGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVV 252          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.820e-70
Identity = 120/233 (51.50%), Postives = 159/233 (68.24%), Query Frame = 2
Query:  326 ALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPP--TPGDGYRVRISQ-RGMDRVRCSEDFFLLGS----DAGDLGSGASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVLAA 1003
            AL VV+P+EG  V A   + VEW G G   R++IDL+YCGS   C +D CG ++ +LCP GE+GC D +G Y++VMPEP   T G GY+VR++     D   CS++F+L+       AGD G G  +TV++P+S   A AG++YTVE++YDNG GSSVGRF IDLY + G GDCGT+  ++CDKP  GCKD+ GDY+V IPE   +G Y IRVG   DDSV+ CSD F++L A
Sbjct:    7 ALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGS--MCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAG-GPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGA 236          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 1.900e-67
Identity = 121/249 (48.59%), Postives = 164/249 (65.86%), Query Frame = 2
Query:  287 ALITGVLMTSSSLALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPP--TPGDGYRVRISQ-RGMDRVRCSEDFFLLG-------SDAGDLGSGASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVLAA 1003
            AL  G+L  +S  AL VV+P+ G  V +   + VEW G G   RF+IDL+YC S   C +D CG ++ +LCP GE+GC D +G Y++VMPEP   T G GY+VR++     D   CS++F+L+        SDAG    G  +TV++P++   A AG++YTVE++YDNG GSSVGRF IDLY + G GDCGT+  ++CDKP  GCKD+ GDY+V IPE   +G Y IRVG   D+SV+ CSD F++L A
Sbjct:    9 ALACGMLGVAS--ALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNS--MCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAG----GPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGA 249          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.340e-66
Identity = 118/236 (50.00%), Postives = 156/236 (66.10%), Query Frame = 2
Query:  326 ALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPPT-PGDGYRVRISQRGMDR-VRCSEDFFLLGS----DAGDLGSGASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVLAAWSFA 1015
            AL VVSP+ G  V A + + VEW G     R+DIDL+YCGS   C +D CG ++ +LCP G++GC D  G Y+VVMPEP      GY+V ++    +    CS DF L+ S    DA D+G  A ++V++P+    A+AG +YTVE++YDNG GSSV RF IDLY S G GDCGT+ T+ICDKP  GCKD+ GDY+VVIP  T SG Y IRVG+  DD V+ CSD+F+++   S +
Sbjct:   19 ALEVVSPAAGDMVVADSAYTVEWTGA-TSGRYDIDLYYCGSV--CMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMG--AYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGESMS 249          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.050e-65
Identity = 115/230 (50.00%), Postives = 156/230 (67.83%), Query Frame = 2
Query:  326 ALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPPT--PGDGYRVRISQ-RGMDRVRCSEDFFLLGS-DAGDLGS--GASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVL 997
            AL VV+PS  + V A   + VEW G  +  RF+IDL++CGS   C +D+CG ++ +LCP GEEGC D +G Y++VMPEP +     GY+VR+      D + CS+ F+L+ S DA D GS  G  +TV++P     A AG++YTVE++YDNG GS V RF IDLYM++G GDCGT+ TSICDKP  GCKD+ GDY+V IP  T +G Y+IRVG   D+ ++ CS TF ++
Sbjct:   19 ALEVVTPSADLIVVADRTYTVEWTGA-DSGRFEIDLYHCGS--MCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM 245          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.600e-64
Identity = 113/229 (49.34%), Postives = 155/229 (67.69%), Query Frame = 2
Query:  326 ALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPP--TPGDGYRVRISQ-RGMDRVRCSEDFFLLGS-DAGDLGS--GASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDV 994
            AL V +PS+G+TV A   + VEW G     RF+IDL+YCGS   C +D+CG ++ +LCP GE+GC D +G Y++VMPEP   T G GY+VR+      +   CS++F+LL S +A  +G   G ++ V++P S  +A    +YTVE++YDNG GSSV RF IDLY ++G GDCGT+  SICDKP  GCKD+ GDY+V IP  T +G Y+IRV    DDS+++CS TF +
Sbjct:   19 ALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGS--MCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 3.150e-63
Identity = 112/233 (48.07%), Postives = 156/233 (66.95%), Query Frame = 2
Query:  308 MTSSSLALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPPT-PGDGYRVRISQRGMDR-VRCSEDFFLLGS-DAGDLGS-GASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDV 994
            M S++ AL VVSP  G++V A   + VEW G     RF+IDL+YC S  FC DD CG ++ +LCP G +GC D  G Y+++MPEP +    GY+V +     +  + CS+DF L+ S DA + G  G S+TV++P+    A+AG+ YTVEW+Y+NGFGSS  RF +DLY+  G GDCGT+ T++CD+P  GC D+ GDY+V IP  T +G Y IRVG+  D+ ++ CSDTF+V
Sbjct:   13 MLSAANALEVVSPDGGISVLADRAYTVEWTGT-TTGRFEIDLYYCNS--FCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242          
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 3.850e-60
Identity = 109/229 (47.60%), Postives = 150/229 (65.50%), Query Frame = 2
Query:  326 ALSVVSPSEGMTVAAGTPFEVEWVGVGEQARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPEPPT-PGDGYRVRISQRGMDR-VRCSEDFFLLGS-DAGDLGS-GASITVSAPTSQSVALAGDQYTVEWEYDNGFGSSVGRFKIDLYM-SEGPGDCGTWQTSICDKPERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVL 997
            AL VVSP+ G++V A   + VEW G  + +RF+IDL+YCGS  FC +D CG ++ +LCP G +GC D  G Y++VMPEP      GY+V ++    +  + CS DF L+ S DA   G  G S+TV++P+    A+AG  YTVEW+Y+NG GSS  RF IDLY    G GDCGT+  ++CDKP  GC D+ GDY+V IP  T +G Y +RVG+  DD +F CS+ F+++
Sbjct:   19 ALEVVSPAAGISVIADRTYTVEWTGTSD-SRFEIDLYYCGS--FCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig929.20035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LEQ9_ECTSI6.230e-7649.28EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE... [more]
A0A6H5KPZ5_9PHAE5.070e-7451.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FN59_ECTSI6.350e-7351.02EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LI46_ECTSI1.820e-7051.50EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFT9_9PHAE1.900e-6748.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3E8_ECTSI3.340e-6650.00Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
D7FYL2_ECTSI1.050e-6550.00EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JRG9_9PHAE1.600e-6449.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY62_9PHAE3.150e-6348.07GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
D7G3F0_ECTSI3.850e-6047.60EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig929contigD-dichotoma_M_contig929:198732..201911 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons5
Model size1717
Cds size759
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931167.8926487-UTR-D-dichotoma_M_contig929:198731..1994301622931167.8926487-UTR-D-dichotoma_M_contig929:198731..199430Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig929 198732..199430 -
1690799645.8205383-UTR-D-dichotoma_M_contig929:198731..1994301690799645.8205383-UTR-D-dichotoma_M_contig929:198731..199430Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig929 198732..199430 -
1622931168.045654-UTR-D-dichotoma_M_contig929:201652..2019111622931168.045654-UTR-D-dichotoma_M_contig929:201652..201911Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig929 201653..201911 -
1690799645.8921669-UTR-D-dichotoma_M_contig929:201652..2019111690799645.8921669-UTR-D-dichotoma_M_contig929:201652..201911Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig929 201653..201911 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931167.9058073-CDS-D-dichotoma_M_contig929:199430..1995671622931167.9058073-CDS-D-dichotoma_M_contig929:199430..199567Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 199431..199567 -
1690799645.8319438-CDS-D-dichotoma_M_contig929:199430..1995671690799645.8319438-CDS-D-dichotoma_M_contig929:199430..199567Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 199431..199567 -
1622931167.9249003-CDS-D-dichotoma_M_contig929:199734..1998701622931167.9249003-CDS-D-dichotoma_M_contig929:199734..199870Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 199735..199870 -
1690799645.8438885-CDS-D-dichotoma_M_contig929:199734..1998701690799645.8438885-CDS-D-dichotoma_M_contig929:199734..199870Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 199735..199870 -
1622931167.949814-CDS-D-dichotoma_M_contig929:200398..2006771622931167.949814-CDS-D-dichotoma_M_contig929:200398..200677Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 200399..200677 -
1690799645.8558998-CDS-D-dichotoma_M_contig929:200398..2006771690799645.8558998-CDS-D-dichotoma_M_contig929:200398..200677Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 200399..200677 -
1622931167.9708035-CDS-D-dichotoma_M_contig929:201177..2012681622931167.9708035-CDS-D-dichotoma_M_contig929:201177..201268Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 201178..201268 -
1690799645.8677108-CDS-D-dichotoma_M_contig929:201177..2012681690799645.8677108-CDS-D-dichotoma_M_contig929:201177..201268Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 201178..201268 -
1622931168.021964-CDS-D-dichotoma_M_contig929:201536..2016521622931168.021964-CDS-D-dichotoma_M_contig929:201536..201652Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 201537..201652 -
1690799645.878992-CDS-D-dichotoma_M_contig929:201536..2016521690799645.878992-CDS-D-dichotoma_M_contig929:201536..201652Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig929 201537..201652 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig929.20035.1prot_D-dichotoma_M_contig929.20035.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig929 199431..201652 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig929.20035.1

>prot_D-dichotoma_M_contig929.20035.1 ID=prot_D-dichotoma_M_contig929.20035.1|Name=mRNA_D-dichotoma_M_contig929.20035.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=253bp
MASTSRIVFALITGVLMTSSSLALSVVSPSEGMTVAAGTPFEVEWVGVGE
QARFDIDLHYCGSYSFCFDDNCGFFLASLCPEGEEGCGDEDGGYEVVMPE
PPTPGDGYRVRISQRGMDRVRCSEDFFLLGSDAGDLGSGASITVSAPTSQ
SVALAGDQYTVEWEYDNGFGSSVGRFKIDLYMSEGPGDCGTWQTSICDKP
ERGCKDTTGDYNVVIPESTTSGTYRIRVGLQGDDSVFACSDTFDVLAAWS
FA*
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mRNA from alignment at D-dichotoma_M_contig929:198732..201911-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig929.20035.1 ID=mRNA_D-dichotoma_M_contig929.20035.1|Name=mRNA_D-dichotoma_M_contig929.20035.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=3180bp|location=Sequence derived from alignment at D-dichotoma_M_contig929:198732..201911- (Dictyota dichotoma ODC1387m male)
CCTCTATTTACCGGTGCTGACTCTACATTACACACCGTACTACCCCGGGT CCTCTACGACAATCGCCTCGCCGTCTGCTTGTCGTGGCCCAGTACGCCCT AGCCTTCCAAAGCATTTGATACCACTCGTCGCCAACTTCCTCAGCCCCAA CCCTCTGTCGGATACCTCTCTTGACCAAGCCATATTCAATTATCCACATT CACGTGCGAAACGCTACGTCTAGCTCTTCTCTCCGGAACACGTGAGATAC TTGTCCGACATGGCTTCAACCTCCCGCATCGTCTTCGCCCTCATCACCGG GGTGCTCATGACCTCGAGCTCCTTGGCGCTCAGTGTGGTGTCACCGTCCG AGGGAATGACGGTAGCAGCGGGCACGTGAGTTGTCTACACAGGCTGTAGT GCTCATCTTGTGGTTTCGAAAGGCACATGGTGCGGTGCGTGTTACTTCTT TGAGGGGCAACGATACTGTAAACTACGATCAAACACCTTGTAATCATGCG CCACACAGGTTTGCAGTTGTTTTTCTTGCCCCACGAAAAGCCACTTGAGC ACGGCAGTCCCTGGCATACTTTTGACGACGCATGTACTCGTCCATGAGGT TTGCTGACCTGATCGTCTTTCGCCTCTTGTCCCTCTGCATCAGGCCCTTC GAGGTGGAGTGGGTTGGCGTCGGCGAGCAAGCGCGGTTCGATATCGACCT CCATTATTGCGGATCTTACTCGTTCTGCTTCGATGTGAGTGTCGAAATGC TACCCGAATCATCAACCCATCAGCTTGAACCTCGCAAGTGGACTAAGAGC AGGCCGCTGTGTGAAATGCGCAACAATACCTGTCTCACGATCAGGACAAT GCTTTTTAAAATGGGTCGTTCAAAAGCACACAAGATGTACTGTAAATATC AAACTCATGATAGCATGTGCAACACAGTAGAGTGGTTGTACAGTAGCGAT GAAAATATGGTTAATCCAATGGCTGCAACCCTTCAAATGCTGAGTATCTT TTTATCTTGTCTTTAGTAAAGAACTAAACATACCCGGGCGTCCAATGGCT GCGTATTAAATGCCAGTAAAATGTATCCGAAGATTATTCCTTGTGCCGAG TACTGTACCTTGAATCGACCTTGACCTGTTGAATCTGTAGCAAGGCTAAG AATCGCCTCTCCCAGTGATGTTGAAGCTGCCTTCACACGTCAGGCCCTGC CTCCTCTCTATGCCCGCCTCCAATACTTCCCCAGGACAACTGCGGCTTCT TCCTGGCCAGCCTGTGCCCAGAGGGCGAGGAGGGCTGCGGGGACGAAGAC GGGGGCTACGAGGTCGTGATGCCCGAGCCTCCGACTCCTGGAGACGGATA TCGCGTGCGCATCTCGCAGAGAGGCATGGATAGAGTACGATGCTCGGAAG ACTTCTTTCTTCTGGGATCCGACGCAGGCGACTTGGGCTCGGGAGCGTCG ATCACCGTGTCGGCTCCGACTTCGCAGTCGGTCGCCTTGGCTGGAGACCA GTACACGGTAGAGGTGAGCAAAATGGACCCGAATATCATACTTTTATTGC TGCAATTGTTATTCTTAAGGACTGCACGCAGTAACTACAGTACTTGACAT TACAAAAAACGAATACAATTGAACCTCCAGATGAAGACGCCCCCTCGTTA GGGCCCCCTCCAGATTAAGACAACCCCAAGGGTAGTAGTACAAAGACTAG GTAGATCGAAGCGAGACAATTGTAAAACTAAGGTAGATCGAAGCGAGACA ATTGTAAAATTAAGGTAGATCGAAGCGAGACAATTGTAAAATTAGGGTAG ATCGAAGCGAGACAATTGTAAAATTAGGGTAGATCGAAGCGAGACAATTG TAAAATTAGGGTAGATCGAAGCGAGACAACTGTAAAATTAAGGTAGATGA AGAACTGGGGTGGTCACTGATATAGTGCTTGAAGAACTGGCGTGGTCATG AGAACCGGCCGTAGTTGGGTCAGGAGACGGCAGCGACATTCGCCTAAGAT GACCTTGATTGCCTGCACACTCCTTCCGCCTCTCGTGTCAGTGGGAATAC GACAACGGGTTCGGCAGTTCTGTGGGCCGTTTCAAGATCGACCTGTACAT GAGCGAGGGCCCCGGAGACTGCGGAACATGGCAGACGTCGATCTGCGACA AGCCGGAACGGGGCTGCAAGGACACAAGTGAGTAGTATTGAAGCCGTGTA CTACTGTACAGATTACTACTCTTACCCTAGTACGGTTTTGATTTCGAGGG CGAGCGAATGCATATATTTAGGCTTCTCATCGGTTCCAACTGTGTGCTAA GGGTTTCCATCTTCGTTCGGCTGCTGTTCCGTCTCCGTGAGTAGCTGGTG ACTACAATGTGGTGATCCCGGAGTCCACGACGAGTGGGACGTACAGGATT CGAGTGGGCCTACAAGGGGATGACTCGGTGTTCGCGTGCTCGGACACCTT CGATGTGCTGGCAGCCTGGAGTTTCGCATAAACGGGTTCAAATGGCAAAT CGGAGACCCCGGCCAGCTCTCTGGCCGTATAGCTTTGAGGGTGGGCATTA GAGAACTCGGTACTGCTGGGAACTGGCGGTGCTTCTCACCGCCGTGTTAC CCAATGGGTCGCTGTGTCTGTCCATCAGTGCACAGTCCCAGAACATTCGT AGTCATGTCGTAAGTCGGTTGTTGGTTCGCGCGATTGTACCTTTATCCCT TGAGGAGCCGAAATGACTTGACTTTAGCCTATATTGTGAGGTCGCTGTTA GTCGGCGACCCTTGGGTCGCCGGTGTTGTGGCACTGTGACTAGCGGGAGA ATATTCCTTCTGAAGTGTTGGATGGAAAGATGGTATCGATGTCGTTTTGC ACTGATGCCGTTGGGGCGTGTGGGAAGACCGAGGGCGGTGGGCAATGTGA CCATGTCACCCTGCCTGACGGAGGAACGGCTCTCTCAGCCGATTTGAAGG GAGATGTACTTGGAACCCTTTGGGTAAGGGTTCGGTTAGTCCTCGTTGTC GCCCGAACCCCCGATGGGAATGCCAGGCAAAATAGAACTCGTTTGTGATG TAAGTGATACAAAAAGGCGATGCAATTCACCTGGGGAAGCTAATAGACTA GCTAGTGCCATGGAATGGAAAAATGGAGTGCGTTTTCCTGCTGTAACGGG GAAGAAGAATGCAAGATCATGATCCTTCGC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig929:198732..201911-

>mRNA_D-dichotoma_M_contig929.20035.1 ID=mRNA_D-dichotoma_M_contig929.20035.1|Name=mRNA_D-dichotoma_M_contig929.20035.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1518bp|location=Sequence derived from alignment at D-dichotoma_M_contig929:198732..201911- (Dictyota dichotoma ODC1387m male)
ATGGCTTCAACCTCCCGCATCGTCTTCGCCCTCATCACCGGGGTGCTCAT
GACCTCGAGCTCCTTGGCGCTCAGTGTGGTGTCACCGTCCGAGGGAATGA
CGGTAGCAGCGGGCACATGGCTTCAACCTCCCGCATCGTCTTCGCCCTCA
TCACCGGGGTGCTCATGACCTCGAGCTCCTTGGCGCTCAGTGTGGTGTCA
CCGTCCGAGGGAATGACGGTAGCAGCGGGCACGCCCTTCGAGGTGGAGTG
GGTTGGCGTCGGCGAGCAAGCGCGGTTCGATATCGACCTCCATTATTGCG
GATCTTACTCGTTCTGCTTCGATGCCCTTCGAGGTGGAGTGGGTTGGCGT
CGGCGAGCAAGCGCGGTTCGATATCGACCTCCATTATTGCGGATCTTACT
CGTTCTGCTTCGATGACAACTGCGGCTTCTTCCTGGCCAGCCTGTGCCCA
GAGGGCGAGGAGGGCTGCGGGGACGAAGACGGGGGCTACGAGGTCGTGAT
GCCCGAGCCTCCGACTCCTGGAGACGGATATCGCGTGCGCATCTCGCAGA
GAGGCATGGATAGAGTACGATGCTCGGAAGACTTCTTTCTTCTGGGATCC
GACGCAGGCGACTTGGGCTCGGGAGCGTCGATCACCGTGTCGGCTCCGAC
TTCGCAGTCGGTCGCCTTGGCTGGAGACCAGTACACGGTAGAGGACAACT
GCGGCTTCTTCCTGGCCAGCCTGTGCCCAGAGGGCGAGGAGGGCTGCGGG
GACGAAGACGGGGGCTACGAGGTCGTGATGCCCGAGCCTCCGACTCCTGG
AGACGGATATCGCGTGCGCATCTCGCAGAGAGGCATGGATAGAGTACGAT
GCTCGGAAGACTTCTTTCTTCTGGGATCCGACGCAGGCGACTTGGGCTCG
GGAGCGTCGATCACCGTGTCGGCTCCGACTTCGCAGTCGGTCGCCTTGGC
TGGAGACCAGTACACGGTAGAGTGGGAATACGACAACGGGTTCGGCAGTT
CTGTGGGCCGTTTCAAGATCGACCTGTACATGAGCGAGGGCCCCGGAGAC
TGCGGAACATGGCAGACGTCGATCTGCGACAAGCCGGAACGGGGCTGCAA
GGACACAATGGGAATACGACAACGGGTTCGGCAGTTCTGTGGGCCGTTTC
AAGATCGACCTGTACATGAGCGAGGGCCCCGGAGACTGCGGAACATGGCA
GACGTCGATCTGCGACAAGCCGGAACGGGGCTGCAAGGACACAACTGGTG
ACTACAATGTGGTGATCCCGGAGTCCACGACGAGTGGGACGTACAGGATT
CGAGTGGGCCTACAAGGGGATGACTCGGTGTTCGCGTGCTCGGACACCTT
CGATGTGCTGGCAGCCTGGAGTTTCGCATAACTGGTGACTACAATGTGGT
GATCCCGGAGTCCACGACGAGTGGGACGTACAGGATTCGAGTGGGCCTAC
AAGGGGATGACTCGGTGTTCGCGTGCTCGGACACCTTCGATGTGCTGGCA
GCCTGGAGTTTCGCATAA
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