prot_D-dichotoma_M_contig928.20022.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig928.20022.1
Unique Nameprot_D-dichotoma_M_contig928.20022.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length223
Homology
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: D7FWM8_ECTSI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM8_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 3.060e-97
Identity = 147/216 (68.06%), Postives = 178/216 (82.41%), Query Frame = 0
Query:    4 RQQSDGEERVQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATV-YRDVDERDQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYLETT 218
            RQ SD ++ V LY+N  +R++WD LSE +AI+ TTEHLENARIKSA+GRDEY RECSALI+Q+KDAE AL  +     T +F++EY LDCPYA +RL+ +  PATV +R VDERDQI RARQAAETTQCFITAMDALKLEQRAVDE+ PLI DL  RL KVDGLP +++G ++TR+WL TLN M+A+DELS++QARQLLH+LDTSYS FFRYLE T
Sbjct:   15 RQSSDLDDEVSLYSNARERRQWDKLSEFFAILKTTEHLENARIKSAIGRDEYTRECSALISQYKDAESALLADGSITSTVDFIKEYQLDCPYAMDRLVKYGVPATVLHRQVDERDQIGRARQAAETTQCFITAMDALKLEQRAVDEVQPLIYDLSDRLNKVDGLPNDYEGTQKTREWLVTLNAMRAADELSEDQARQLLHDLDTSYSAFFRYLEMT 230          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A836CDG2_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG2_9STRA)

HSP 1 Score: 243 bits (620), Expect = 6.490e-78
Identity = 128/215 (59.53%), Postives = 157/215 (73.02%), Query Frame = 0
Query:   10 EERVQLYANT-HDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATV-YRDVDERDQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYLETTANNS 222
            EE + L+ NT  +RKKWD L+E +AII T EHLENARIK+A+GRDEY   CS LI QFKDAE  L       +T  F+ E+ +D PYA ERL+ +  PATV +R+ DE D ISRARQAAETTQCFITAMDALKL+QRAVDE+ PLI+D+  RL K +GLP  F+G++  R WL T N ++ASD+L DEQ RQLLH+LD SYS FFR+L  +   S
Sbjct:   32 EEELSLHNNTPKERKKWDQLAEFFAIIKTVEHLENARIKNAIGRDEYTSRCSDLIAQFKDAESTLVSEGHITNTSAFIVEFQMDVPYAMERLVKYGVPATVLHRNHDEHDAISRARQAAETTQCFITAMDALKLDQRAVDEVQPLISDVMDRLNKCEGLPEGFEGVKTMRAWLITFNGLRASDQLDDEQVRQLLHDLDVSYSAFFRFLGDSKRGS 246          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A6S9EJI3_HETAK (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EJI3_HETAK)

HSP 1 Score: 208 bits (530), Expect = 2.550e-64
Identity = 111/210 (52.86%), Postives = 152/210 (72.38%), Query Frame = 0
Query:   11 ERVQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDL-DCPYAKERLINHMSPATV-YRDVDERDQIS-RARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYLET 217
            E V+LY NT +R+++D L+E YAII TTEHLENAR+ +++ ++EY REC+ LI QFKD E  L + N   DT +F+  + L DC  A ERL+ +  PATV +R  D +  ++ +ARQAAE TQ FITAMDALKLEQRAVDE+ PL+ D+  RLT++  LP +F   ++   WL  LN ++A+DEL ++QARQLLH+LD +YS FFR+LE+
Sbjct:   28 EDVKLYKNTRERQRYDRLAEFYAIIKTTEHLENARLSNSIDKEEYARECTTLIQQFKDTESVLIRQNYITDTSSFIAAWGLGDCALAAERLLTYGVPATVVHRSGDGQAGLALQARQAAEATQAFITAMDALKLEQRAVDEVQPLVADVMDRLTRLAALPADFAPTQKIEAWLKELNGLRAADELGEDQARQLLHDLDAAYSGFFRFLES 237          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A5D6XFV6_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFV6_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.150e-54
Identity = 99/208 (47.60%), Postives = 138/208 (66.35%), Query Frame = 0
Query:   10 EERVQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATVYRDVDER--DQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYL 215
            ++ V+L+ +T +R+K++ LS+L+AII TTEHLE A ++ A+  DEY   C+ LI+Q+K AE AL+      + E FL +Y LDCP A ERL+    PATV  +   R  D ++     A+T Q FIT MD LKL  RAVDEI PL++++   LT+V GLPP+FDG  +   WL TLN ++ASDEL D+QARQL  +L+ +YS F  +L
Sbjct:   24 DQEVRLWKDTKERRKFEDLSDLFAIIKTTEHLEAAYVRDAITPDEYTEACTKLISQYKTAENALRLGGHLPNIEAFLAQYRLDCPRALERLVRIGVPATVVHNTTSRKTDSVN----VAQTVQSFITVMDVLKLNIRAVDEIQPLVSEMMASLTQVSGLPPDFDGRAKIEGWLRTLNGLRASDELDDDQARQLSFDLERAYSSFMAFL 227          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A8K1FEK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEK3_PYTOL)

HSP 1 Score: 187 bits (476), Expect = 1.230e-52
Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 0
Query:    7 SDGEERVQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATVYRDVDER--DQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYL 215
            S G E ++L+ +T DR+K++ LS+LYAII TTEHLE A ++ A+  +EY   C+ LI+QFK AE AL+      D E+F+ +Y LDCP A ERL+    PATV  +   R  D ++     A+T Q FIT MD LKL  RAVDEI PL++++   LT+V GLPP+F G  +   WL TLN M+ASDEL ++QARQL  +L+ +YS F  +L
Sbjct:  384 SQGNEEIKLWKDTKDRRKFEDLSDLYAIIKTTEHLETAYVRDAITPEEYTEACTKLISQFKTAETALRMGGFLNDIESFIAQYRLDCPRALERLVRIGVPATVVHNTTNRKTDSVN----VAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMASLTQVSGLPPDFQGRDKIEGWLRTLNGMRASDELDEDQARQLSFDLERAYSSFMAFL 590          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A812XGV8_SYMMI (Vps28 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XGV8_SYMMI)

HSP 1 Score: 179 bits (453), Expect = 2.200e-52
Identity = 101/212 (47.64%), Postives = 139/212 (65.57%), Query Frame = 0
Query:   13 VQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATV-YRDVDER-DQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYLETTANNS 222
            V+L+  +++R++ + L++LYAII  T+ LE A  + A+   EY   C+ L++QFK  E AL         E F+REY++DCP A +RLI    PATV +   D+R D +      AET Q FITAMDALKLEQRAVDE+ PL+ +L   LT+V GLP +F+GL + R WL  LN+M+A +ELSDE+ARQL+ +L+ +YS F RYL T    S
Sbjct:   60 VKLFEGSNERRRHEELADLYAIIKVTDSLEAAYSRDAISTSEYSESCTRLLSQFKGTESALITGGMITSAEIFMREYNIDCPRAYDRLIRAGVPATVMHMSHDDRADSVI----VAETVQAFITAMDALKLEQRAVDEVQPLLAELMSALTRVAGLPADFEGLVKMRLWLQKLNQMRAVEELSDEEARQLIFDLEGAYSAFHRYLSTGGRKS 267          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A7S1FP92_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP92_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.520e-52
Identity = 96/209 (45.93%), Postives = 134/209 (64.11%), Query Frame = 0
Query:   15 LYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATVYRDV--DERDQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYLETTANN 221
            L+ N  +R+K D +++L+AII  TEHLE A  + +V + EY  EC  LI+QF+  E AL KN     +E F++EY ++CP A +RL+    PAT       +E    + A + AE  Q FITAMDALKL+QRAVDE+ PL++DL   LT+V GLP  FD +   ++WL  LN M+A DE+ ++QARQL  ELDT+Y+ F R+L+    N
Sbjct:   16 LFQNAKERRKLDDMADLFAIIKATEHLEIAYGRDSVTQKEYTTECLKLISQFRSTETALIKNGTIRSSEEFIQEYQMECPRAVDRLLRTGVPATTLHQTQANEGAASNEAVRVAECVQHFITAMDALKLDQRAVDEVQPLLSDLMDSLTRVSGLPANFDPVDMLKRWLIKLNAMRAVDEIDEDQARQLSFELDTAYAGFHRFLKGAGKN 224          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: W4GSD6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSD6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 6.790e-52
Identity = 95/207 (45.89%), Postives = 129/207 (62.32%), Query Frame = 0
Query:   13 VQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATVYRDVDERDQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYLETTA 219
            V+L+ +  DR+ ++ +S+LYAII TTEHLE A ++ A+  DEY   C+ LI+Q+K AE AL+        + FL  Y LDCP A ERL+    PATV  +         A   A+T Q FIT  DALK+  RAVDE+ PL+++  G LTKV GLPP FDGL +  QWL  LN M+ASDEL ++Q RQL  +L+ +Y+ F  +L  + 
Sbjct:   54 VKLFESAKDRRMYEDMSDLYAIIKTTEHLETAYVRDAISPDEYTEACTKLISQYKTAETALRNAGHLVSIDAFLSHYRLDCPRAVERLVRLGVPATVVHNTTSTSV--DAVNVAQTVQHFITLSDALKMNIRAVDEVQPLLSESMGSLTKVKGLPPTFDGLMKLEQWLRVLNAMRASDELDEDQTRQLSFDLEQAYTGFMSFLNKSG 258          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: A0A2D4C4W2_PYTIN (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4W2_PYTIN)

HSP 1 Score: 176 bits (446), Expect = 8.690e-52
Identity = 98/205 (47.80%), Postives = 133/205 (64.88%), Query Frame = 0
Query:   13 VQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATVYRDVDER--DQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYL 215
            V+L+ NT +R+K++ LS+L+AII TTEHLE A ++ A+  +EY   C+ LI+QFK AE AL+      D E F+ +Y LDCP A ERL+    PATV  +   R  D ++     A+T Q FIT MD LKL  RAVDEI PL+ ++   LT+V GLP +F G  +   WL TLN ++ASDEL D+QARQL  +L+ +YS F  +L
Sbjct:   29 VKLWGNTKERRKFEDLSDLFAIIKTTEHLETAYVRDAITPEEYTETCTKLISQFKTAETALRLGGFLDDIEAFISQYRLDCPRALERLVRIGVPATVVHNSTNRKADSVN----VAQTVQNFITLMDVLKLNIRAVDEIQPLLCEMMTSLTQVSGLPADFQGRDKMEGWLRTLNSLRASDELDDDQARQLSFDLERAYSSFMAFL 229          
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Match: W2JRS1_PHYPR (Vacuolar protein sorting-associated protein 28 homolog n=23 Tax=Phytophthora TaxID=4783 RepID=W2JRS1_PHYPR)

HSP 1 Score: 176 bits (446), Expect = 9.790e-52
Identity = 95/205 (46.34%), Postives = 134/205 (65.37%), Query Frame = 0
Query:   13 VQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAVGRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERLINHMSPATVYRDVDER--DQISRARQAAETTQCFITAMDALKLEQRAVDEIYPLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQLLHELDTSYSDFFRYL 215
            ++L+A+T DR+K++ L++L+AI  TTEHLE A ++ A+  +EY   C+ LI+Q+K AE AL+        E+F+ EY LDCP A ERL+    PATV  +   R  D ++     A+T Q FIT MD LKL  RAVDEI PL++++   LT V GLPP+F G  +   WL T+N M+AS+EL +EQARQL  +L+ +YS F  +L
Sbjct:   33 IKLWADTKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEYTEACTKLISQYKTAETALRLGGFIDSVESFIAEYRLDCPRALERLVRIGVPATVVHNTTNRKTDSVN----VAQTVQNFITLMDVLKLNIRAVDEIQPLLSEMMSSLTMVSGLPPDFAGRDKIEGWLRTMNSMRASEELDEEQARQLSFDLERAYSSFMAFL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig928.20022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM8_ECTSI3.060e-9768.06Vacuolar protein sorting-associated protein 28 hom... [more]
A0A836CDG2_9STRA6.490e-7859.53Vacuolar protein sorting-associated protein 28 hom... [more]
A0A6S9EJI3_HETAK2.550e-6452.86Vacuolar protein sorting-associated protein 28 hom... [more]
A0A5D6XFV6_9STRA3.150e-5447.60Vacuolar protein sorting-associated protein 28 hom... [more]
A0A8K1FEK3_PYTOL1.230e-5248.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A812XGV8_SYMMI2.200e-5247.64Vps28 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S1FP92_9STRA3.520e-5245.93Vacuolar protein sorting-associated protein 28 hom... [more]
W4GSD6_9STRA6.790e-5245.89Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A2D4C4W2_PYTIN8.690e-5247.80Vacuolar protein sorting-associated protein 28 hom... [more]
W2JRS1_PHYPR9.790e-5246.34Vacuolar protein sorting-associated protein 28 hom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037206VPS28, C-terminal domain superfamilyGENE3D1.20.120.1130coord: 117..217
e-value: 7.4E-34
score: 117.7
IPR037206VPS28, C-terminal domain superfamilySUPERFAMILY140427VPS28 C-terminal domain-likecoord: 122..215
IPR038358VPS28, N-terminal domain superfamilyGENE3D1.20.1440.200coord: 3..102
e-value: 5.7E-22
score: 79.8
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 28..215
e-value: 8.4E-57
score: 191.9
IPR007143Vacuolar protein sorting-associated Vps28PIRSFPIRSF017535ESCRT1_Vps28coord: 3..216
e-value: 1.7E-56
score: 188.9
IPR007143Vacuolar protein sorting-associated Vps28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28coord: 4..217
NoneNo IPR availablePANTHERPTHR12937:SF0VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOGcoord: 4..217
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalPROSITEPS51310VPS28_Ccoord: 120..216
score: 36.202
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalPROSITEPS51313VPS28_Ncoord: 1..111
score: 14.228
IPR037202ESCRT assembly domainSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 10..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig928contigD-dichotoma_M_contig928:144946..151498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig928.20022.1mRNA_D-dichotoma_M_contig928.20022.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig928 144564..152607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig928.20022.1 ID=prot_D-dichotoma_M_contig928.20022.1|Name=mRNA_D-dichotoma_M_contig928.20022.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=223bp
MYGRQQSDGEERVQLYANTHDRKKWDALSELYAIIVTTEHLENARIKSAV
GRDEYVRECSALINQFKDAEMALKKNNDAFDTENFLREYDLDCPYAKERL
INHMSPATVYRDVDERDQISRARQAAETTQCFITAMDALKLEQRAVDEIY
PLINDLWGRLTKVDGLPPEFDGLRRTRQWLTTLNEMKASDELSDEQARQL
LHELDTSYSDFFRYLETTANNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037206VPS28_C_sf
IPR038358VPS28_N_sf
IPR007143Vps28
IPR017899VPS28_C
IPR017898VPS28_N
IPR037202ESCRT_assembly_dom