prot_D-dichotoma_M_contig927.20004.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig927.20004.1
Unique Nameprot_D-dichotoma_M_contig927.20004.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length408
Homology
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 7.880e-82
Identity = 168/386 (43.52%), Postives = 210/386 (54.40%), Query Frame = 0
Query:   30 PRRPSFSAEDIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDD----GRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLR--------SKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASWLEICGKEVLQRM 403
            PRRPSF  ED++Y+DN +L +NKPAG+LSQ DRTGD DVAALAREY+RVAA K+GEAFVA+VHRLDRPVSGVMC+ARTSKAAARLS SFR    VEKIYHAVV G L+G G++ D LV    +      GRGPRT L S              V+G +                               G R+L                             A  P S+           + G+ A LEW+ +    ++ + +       NP+ TL+R+RL+TGRKHQIR QLA MGHPVVGD RYG           + +E  +   + GS   + PL DRSILLHAS+L +PHPTR G MVR  A PP  W ++CG+  +  +
Sbjct:   36 PRRPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRPVSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSS------------APVRGGA-------------------------------GGRLL-----------------------------AAGPTSS-----------SEGKLAQLEWEAIDVSPSSADRLRCPRTG-NPR-TLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSSWCQSRGGDATDESAVPPPRAGS---MEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCGRSCIDEV 333          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.350e-37
Identity = 110/307 (35.83%), Postives = 143/307 (46.58%), Query Frame = 0
Query:  102 MCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDD----GRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSR-NMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASWLEICGKEVLQRM 403
            MC+ARTSKAAARLS SFR   +VEKIYHAVV G+L+G G++ D LV    +      GRGPR  L S            +  +G +                               G R+L                             A  P S+             G+ A LEW+ +  + ++    L      NP+ TL+R+RL+TGRKHQIR QLA MGHPVVGD RYG  R  +    ++V    R   + PL DRSILLHAS+L +PHPTR G  VR  A PP  W ++CG+  +  +
Sbjct:    1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSS------------VPARGGA-------------------------------GGRLL-----------------------------AAGPTSSPD-----------GKLAQLEWEAI-NVSSSSAVRLRCPRTGNPR-TLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYGRSRGGDATDESAVPPPRRAGRIEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCGRSCIDEV 222          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A3M1NPK6_9BACT (RNA pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1NPK6_9BACT)

HSP 1 Score: 140 bits (354), Expect = 6.860e-36
Identity = 114/368 (30.98%), Postives = 155/368 (42.12%), Query Frame = 0
Query:   39 DIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASWLEICGKEVLQRMATA 406
            D++YLDN +L +NKP G+L+Q D TGD DV  L + Y++   +K G  F+ +VHRLDRP SGVM +ARTSKAAARLS+ FR H + EK Y A+V GA  G+G   D+L+ V         RT                +RV  ++ HPG                                                                                 G+ A L W V+ G D               +++L+ +RL TGR HQIR QLA  GHP++GD+RYG  +                   P   R++ LH+  L + HPTR   M   H PPP SW      ++ + +ATA
Sbjct:    4 DVLYLDNHLLVVNKPPGMLAQADTTGDTDVVTLGKAYLKERFQKPGNVFLGLVHRLDRPASGVMVLARTSKAAARLSEQFRRH-SPEKRYLALVEGAWDGNGTAVDHLLKVG--------RT----------------VRVVPAT-HPG---------------------------------------------------------------------------------GKRAELAWRVL-GSDG--------------RVSLVEVRLTTGRPHQIRVQLAHRGHPLLGDLRYGARQ-------------------PFDGRNLALHSWYLGLEHPTRRVAMA-WHVPPPPSWGARFQPQIERLLATA 229          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: UPI001420CA78 (RNA pseudouridine synthase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001420CA78)

HSP 1 Score: 137 bits (345), Expect = 1.480e-34
Identity = 114/368 (30.98%), Postives = 152/368 (41.30%), Query Frame = 0
Query:   39 DIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMH--APPPASWLEICGKEVLQRMA 404
            D++YLDN +L +NKP G+L+Q D TGD DV  L + +++    K G  F+ +VHRLDRP SGVM +ARTSKAAARLS  FR  +  EK Y A+V G  +G+G   D+LV           RT                +RV  ++ HPG                                                                                  + A L W V+               D   +L+L+ +RL TGR HQ+R QLA  GHP++GD RYG  R                   PL  R++ LHA +L I HPTR    V MH  APPPA+W     + + +R+A
Sbjct:    4 DVLYLDNHLLVVNKPPGLLAQADHTGDPDVLTLGKAWLKARFGKPGRVFLGLVHRLDRPASGVMVLARTSKAAARLSDQFRR-RLPEKRYLALVEGVWTGAGTAVDHLVKAG--------RT----------------VRVVPAT-HPGA---------------------------------------------------------------------------------RRAELAWRVLA-------------TDEAERLSLVEVRLETGRPHQVRVQLAHRGHPLLGDFRYGASR-------------------PLDGRNLALHAYRLGIEHPTR---RVPMHWVAPPPAAWGTRFREAIRERLA 229          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT)

HSP 1 Score: 135 bits (340), Expect = 6.680e-34
Identity = 106/353 (30.03%), Postives = 150/353 (42.49%), Query Frame = 0
Query:   39 DIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASW 391
            +++YLDN +L + KP G+L+Q DRTGD D+    + +++    K G  F+ +VHRLDRPVSGVM +ARTSKAA RLSK+FRE + VEK Y A+V G +SG+G + D L+     +DGR                    +R+  S+ HP                                                                                 +G+ AVL W  +                   +L+L+ ++L+TGR HQ+R QLA++G P++GD RYG  R                    L  R++ LHA +LA  HP R   +V   APPP SW
Sbjct:    2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRPVSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLL----KEDGR--------------------VRIV-SADHP---------------------------------------------------------------------------------KGKRAVLRWQAL---------------GEEGRLSLVEVKLLTGRAHQVRVQLAALGTPILGDFRYGATRE-------------------LDGRNLALHAYRLAFEHPVRREPLV-FTAPPPVSW 212          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A7K1ZH14_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZH14_9BACT)

HSP 1 Score: 135 bits (339), Expect = 2.150e-33
Identity = 113/378 (29.89%), Postives = 156/378 (41.27%), Query Frame = 0
Query:   30 PRRPSFSAEDIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHP-TRPGEMVRMHAPPPASWLEICGKEVLQRMATA 406
            P+RP      I+Y+DN +L +NKP G+L Q D T D D+  L + Y++    K G+AF+ +VHRLDRP SGV+ +ARTSKAAARLS  FR+ +  EK Y A+V G   GSG                     LR   H   A+ R G+R+                                             V  GD                                     A G+ A L+W                ++     L+LL +RL TGRKHQIR Q ++ GHP++GD RYG LR                    L  R++ LHA +L + HP TR  E +    PPP +W  +  +E+ Q +A++
Sbjct:   16 PKRPDLH---ILYMDNHLLVVNKPPGMLVQQDETNDPDLLRLGKRYLKETFAKKGQAFLGLVHRLDRPASGVVVLARTSKAAARLSDQFRQ-RTPEKEYLALVEGVCRGSGT--------------------LR---HTLAASVRGGVRI---------------------------------------------VPAGD-------------------------------------ASGKEARLQW---------------RSLGVQDDLSLLSVRLETGRKHQIRVQFSAEGHPILGDFRYGALRE-------------------LDGRNLALHAFRLTVAHPVTR--ERMTFCTPPPPAWGTLFAREIAQALASS 248          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT)

HSP 1 Score: 131 bits (330), Expect = 2.650e-32
Identity = 113/350 (32.29%), Postives = 146/350 (41.71%), Query Frame = 0
Query:   39 DIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRD-RSILLHASKLAIPHPTRPGEMVRMHAPP 387
            D++YLDN +L + KPAG+LSQ D TGD+DV   A++++R    K G  F  +VHRLDRPV G M IARTSKAA+RL++ FR+ +  EK Y A+V G L GSG + D L+             K R P        ++G RVK                                    RV  G D                                    GA+         AV+ W        T   VL +        +L+ + L TGR HQIR QL+ +GHP+VGD+RYG                      PL D R I LHA+ L I HPT+        APP
Sbjct:    4 DVLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRPVGGAMVIARTSKAASRLAEQFRQ-RTPEKRYLAMVEGRLDGSGRETDWLL-------------KTRDP--------KRGTRVK------------------------------------RVRQGTD------------------------------------GAK--------RAVMTW--------TSRSVLGTR-------SLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYG-------------------AEAPLGDGRGIALHATHLTIEHPTKRDRRTFTSAPP 217          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A3N1UFZ4_9DELT (23S rRNA pseudouridine1911/1915/1917 synthase n=1 Tax=Desulfosoma caldarium TaxID=610254 RepID=A0A3N1UFZ4_9DELT)

HSP 1 Score: 127 bits (320), Expect = 1.730e-30
Identity = 110/352 (31.25%), Postives = 146/352 (41.48%), Query Frame = 0
Query:   40 IIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASW 391
            ++++DN +L + KPAG+L QGD +GD+ +  LAR++I+   +K G  FV +VHRLDRPVSG++ +ARTSKAA+RLS  FRE++  +KIY AVV G  S                                        R   +  H   G+IR +   ++                                                        +P+      K    Q A L +  V   D               Q TLL + L TGRKHQIRAQLA  G P+VGDVRYG                      PL  RSI LHA KL +PHPT+ GE V +  P P +W
Sbjct:   32 VLHVDNHLLAVYKPAGLLVQGDPSGDLSLLDLARKWIKERYKKPGNVFVGLVHRLDRPVSGLVLLARTSKAASRLSAVFRENR-AQKIYLAVVEGRPS----------------------------------------RACATLVH---GLIRQESKSVAV-------------------------------------------------------LPV------KTPGTQRAELHYRTVAFSD---------------QRTLLAVHLKTGRKHQIRAQLAHEGCPIVGDVRYG-------------------APTPLPYRSIALHAWKLTLPHPTK-GEAVEISCPLPLNW 243          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT)

HSP 1 Score: 126 bits (316), Expect = 3.050e-30
Identity = 111/352 (31.53%), Postives = 144/352 (40.91%), Query Frame = 0
Query:   40 IIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASW 391
            ++YLDN +L +NKPAG+ SQGDR+G   V +L +  I+    K G  ++ +VHRLD PVSGVM +ARTSKAAARL + FRE + VEKIY A+V G L G GV  D + P                         R  MR+  S+ HP                                                               W                  G+ AVL W+ +                T   LTL+R+   TGRKHQIR QLA  G+PV+GD RY                 +R  L P     + LHA KL++ HPTR  E ++  AP P+ W
Sbjct:    9 VLYLDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRE-RTVEKIYLALVEGELEGEGVWEDFIAPA------------------------RDHMRLV-SADHP---------------------------------------------------------------W------------------GKRAVLRWEALM---------------TRNGLTLVRLIPETGRKHQIRVQLAFRGYPVLGDRRYR----------------ARRWLAP---GQMALHAWKLSVTHPTR-RERMQWTAPVPSCW 218          
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Match: A0A1M5AMY6_9DELT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Desulfacinum infernum DSM 9756 TaxID=1121391 RepID=A0A1M5AMY6_9DELT)

HSP 1 Score: 125 bits (314), Expect = 9.640e-30
Identity = 113/366 (30.87%), Postives = 148/366 (40.44%), Query Frame = 0
Query:   26 GASGPRRPSFSAEDIIYLDNQILGINKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSGVMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVSGNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSCSRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAWSPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQLTLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGSRNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASW 391
            G   PR     A  ++Y DN ILG+ KPAG+L QGDRTGD  +  LAR +I+    K G  F+ +VHRLDRPVSGV+  ARTSKAA+RLS+SFRE + V++ Y AVV G                     + P   +    H          RV G S                                 RV                             +A + P+               Q A L + V+               +T    +LL +RL TGRKHQIR QLA++G P+ GD+RYG  +                   PL ++ I LHA ++  PHPTR   MV +  P P  W
Sbjct:    2 GQEEPRIFFHPAWPVLYEDNHILGVYKPAGLLVQGDRTGDPCLLELARRWIKEEYGKPGNVFLGLVHRLDRPVSGVLVFARTSKAASRLSRSFRERETVKE-YLAVVEGRP-------------------KDPEATIVHHVH----------RVPGGS--------------------------------TRV-----------------------------TAGTHPA--------------AQRASLSYRVL---------------ETGGSRSLLFVRLDTGRKHQIRVQLAALGCPIAGDLRYGASK-------------------PLANQQIALHARRICFPHPTR-ASMVEIVCPVPRQW 227          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig927.20004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLH5_9PHAE7.880e-8243.52PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D8LGZ5_ECTSI1.350e-3735.8323S RNA-specific pseudouridylate synthase n=1 Tax=... [more]
A0A3M1NPK6_9BACT6.860e-3630.98RNA pseudouridine synthase n=1 Tax=Bacteroidetes b... [more]
UPI001420CA781.480e-3430.98RNA pseudouridine synthase n=1 Tax=Rhodocaloribact... [more]
A0A848XZP8_9BACT6.680e-3430.03RNA pseudouridine synthase n=1 Tax=Rhodothermaceae... [more]
A0A7K1ZH14_9BACT2.150e-3329.89RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A800M4B4_9BACT2.650e-3232.29RluA family pseudouridine synthase n=1 Tax=Bactero... [more]
A0A3N1UFZ4_9DELT1.730e-3031.2523S rRNA pseudouridine1911/1915/1917 synthase n=1 ... [more]
A0A1M6P7L7_9BACT3.050e-3031.53Ribosomal large subunit pseudouridine synthase D n... [more]
A0A1M5AMY6_9DELT9.640e-3030.87Ribosomal large subunit pseudouridine synthase D n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 49..320
e-value: 4.5E-26
score: 91.8
NoneNo IPR availableGENE3D3.30.2350.10coord: 37..191
e-value: 3.2E-23
score: 84.4
coord: 254..399
e-value: 1.9E-19
score: 72.0
NoneNo IPR availablePANTHERPTHR21600:SF56TRNA PSEUDOURIDINE SYNTHASE Ccoord: 286..395
NoneNo IPR availablePANTHERPTHR21600:SF56TRNA PSEUDOURIDINE SYNTHASE Ccoord: 37..147
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 286..395
coord: 37..147
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 293..394
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 37..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig927contigD-dichotoma_M_contig927:138441..140782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig927.20004.1mRNA_D-dichotoma_M_contig927.20004.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig927 138306..141081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig927.20004.1 ID=prot_D-dichotoma_M_contig927.20004.1|Name=mRNA_D-dichotoma_M_contig927.20004.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=408bp
MTSRLAVRGLSFHHLDKSGILIRRSGASGPRRPSFSAEDIIYLDNQILGI
NKPAGILSQGDRTGDIDVAALAREYIRVAARKSGEAFVAMVHRLDRPVSG
VMCIARTSKAAARLSKSFREHKNVEKIYHAVVVGALSGSGVQADNLVPVS
GNDDGRGPRTKLRSPYHEKEAATRQGMRVKGSSCHPGTGIIRADGLDLSC
SRANPSTLGRPSSSGARVLNGMDDVDTGDKGGDIASQEDQGGDQDNESAW
SPPSNIPLEGARFEKVARGQNAVLEWDVVCGLDATENPVLASNVDTNPQL
TLLRIRLVTGRKHQIRAQLASMGHPVVGDVRYGNLRSKEERLLTSVKMGS
RNMLLPLRDRSILLHASKLAIPHPTRPGEMVRMHAPPPASWLEICGKEVL
QRMATAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf