mRNA_D-dichotoma_M_contig101.160.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig101.160.1
Unique NamemRNA_D-dichotoma_M_contig101.160.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig101.160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig101contigD-dichotoma_M_contig101:90013..95106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-22_001250.1
Exons2
Model size192
Cds size192
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927488.73128-CDS-D-dichotoma_M_contig101:90012..901821622927488.73128-CDS-D-dichotoma_M_contig101:90012..90182Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig101 90013..90182 +
1690797997.906866-CDS-D-dichotoma_M_contig101:90012..901821690797997.906866-CDS-D-dichotoma_M_contig101:90012..90182Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig101 90013..90182 +
1622927488.7447457-CDS-D-dichotoma_M_contig101:95084..951061622927488.7447457-CDS-D-dichotoma_M_contig101:95084..95106Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig101 95085..95106 +
1690797997.9242773-CDS-D-dichotoma_M_contig101:95084..951061690797997.9242773-CDS-D-dichotoma_M_contig101:95084..95106Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig101 95085..95106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig101.160.1prot_D-dichotoma_M_contig101.160.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig101 90013..95106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig101.160.1

>prot_D-dichotoma_M_contig101.160.1 ID=prot_D-dichotoma_M_contig101.160.1|Name=mRNA_D-dichotoma_M_contig101.160.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=64bp
MLQRFRDFFNAEEKEIGRQEHPKAHAYKGCLREEGQLKYVFDRRQCYRRD
ALAAHLGADFKAQP
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mRNA from alignment at D-dichotoma_M_contig101:90013..95106+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig101.160.1 ID=mRNA_D-dichotoma_M_contig101.160.1|Name=mRNA_D-dichotoma_M_contig101.160.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=5094bp|location=Sequence derived from alignment at D-dichotoma_M_contig101:90013..95106+ (Dictyota dichotoma ODC1387m male)
ATGTTGCAGCGGTTCCGCGACTTTTTCAATGCTGAGGAGAAGGAGATTGG
GAGGCAAGAACACCCCAAGGCACACGCCTACAAGGGTTGCTTGCGCGAAG
AGGGACAGCTGAAGTACGTTTTCGACCGGAGGCAATGTTATAGACGAGAC
GCACTGGCGGCGCACCTAGGGTGGGTTGCTTTCTGGGCAATGACCCCCCT
TGTACGCTTCGACTACCATCCATTACATCGGTGTTAAGTCAGTTAATGTG
AAACAGACAGTTTGTGCGGCAGTAAAGCAAGAAGTTCTGTTGAAATGGGG
TCGACAGTGAGAATGAGCTATATGACATCATACAAATCCTGGCAAAAATG
GCATTTTAATTCCGGCTTTTGTTTTCCAGGTACTCCTACGTTAGGGATGC
GGAAGGGGTATCGTACACGCTGGGCATTGTAACTTCAGTAGTAGTGGACA
GCCTCTTCATGGATATTTCAAGAGGTTAATACTATATCCAATATAAGACG
GTAAAGACCCATTGATCCCACCATGTCTCACCGCTTCCTTGCAGTGGCGC
ATATAAAGATCGGTACAGCCCATTCAACTCTTGAGGGGCCCTGTACACGC
GGAATGCATCCATCTTAATGTATTCAACGTCCCTAGGAACACGGAAATTG
TTGGGAATTTTGCAAGACTGATGTCAATGGTGTTGGTTGTCCTGGCCTGC
GGATGTCAACCATCTGCGACGTTCGGCGGGACAAGATCGTTTGTTTCAAC
CAAAGCGCCAATGACTCTGCGACATATATGCAAAGGCAGCGTTTCCATTG
CTCTGTCGATAAAACCACAGCTGATACTGCCGCATAGTTGTTGTGGTAGA
CTCGACAACCGTCGACTCAAGCAGCGAGGTGTAAACGTTGTGTCTCGCTC
AGCTGAAGCGTGCGAACGAAGCATGCAATGGTTCGCTAATCGTCGGCAAC
CTCAGAAGAGAGTATCACAGTACAGTACAACAGCACAGTGCAGCAGTGCA
GCAGTGCAGCAGTGCAGCAGTGCAGCAGTGTAGTACAGTACAGTGTAGTA
CAGTGTGGTGCAGTGATGTAGTGCAATGCAGTACTGTGGTGAAGATTAGA
GTGGGAATTACTGGGATAGACGACGGAGTGTGTGGGCTGATCTTGTGCAA
GGGACCTGAACCTGAGGCCTTGAAGGGCTTGTAACACACGCCGCGGAAGC
GTAGGTTCTCCTGAGCGCAACCCTGTCTCTGCTGTGGAGATATAAAGGAT
AGCTTTGGGGAGCACGCCGATAGATATCTTTATTACTGATTGACGACTAC
AACCCACAAATATGGGAATACACACGGTGCGTACTGAGTAACAGCCCCGA
GAATCACACACAGAGGGAGGTCGTTATAGACTAAGAAGAAGGGCGCCCCA
GTTCGCAACTCACAGTATAATCACGCCGCATGGGTTACCTTACCAGTCGG
AACAACCTGACAGTTTCGTACACAATCACTTGACACGCGTGTCCAGGACT
TTGGTGAAGAGCAACCTCACAACAGTACAGTACAATATAAATTATAGTAC
CGTACTGTAAACGTCCGAGGACGTTTTATCTTGGATATAGTATTGACCTC
TTGAAAAATTCATTAAGAGACTGTCCACTACTATTTTAGTTACAATGCCC
AGCGTGTATGATGATGGCCCTTCTGCCTCCCGAAGACCGTCTTTAATGGG
TCTGAAAATTGGATCCAGGGAATCGGCACAAACTCCTATATAAACGTCAG
CGCTGGAATCTGGCGCAATTACCGGTAAATCGTTGCATGAACCTGAAATC
GGCGGCCCAATTTCAGGTGGATTTCTGAATTATCCTGAATCCGGTGTGAA
GCGCCTTTCGTGATCAACACGCAGCAAGTCGGTCACGAACGGTTCGAGGA
CTAACGCCCTTATGATGTACCCTCTCTGGTGTCGTCTCGACGCGCTCTTG
ACGCCTGCACCGGCTGCTATGGGCTGAGCGCCCGTCAGACCAAACCAGAT
AAATCAATTACCAGTCCAGATCGTGATTTCAACTTCAAGCCCATTGAAGA
CGGCTTAACGCAGGAGTACCTGGCGAACAAAGCCACAACTAAATCGCCAT
TTTTTATAGGATTTGTATGATGCCATACACCCCATTCCCACTGTCGGCCC
CATTTCAAAACTTTGCTTGTTGTGAGAGGTTTCATCAACTTTGGAGGTAG
ACGGGCTATAAATACATCAATGTGCTCTCGATCGGGAAACATGGGGAGCT
CGTGACTAACGCTGCTCATTTCAGTGTCTAAAGTGAAGCAGTAATCCTTC
GTTTTTCTCATCAAGTAGTCCTGGGTGATTCCTTGGTGATGACATCCGCC
GTAGTGATCTCATCGTGCGATCATAGTCTGTGCGCGTCGAACGGTCCATC
ATCATTGCGTTCCGGACAACATATTTTTCAGATCTAATGCAGCACGGAGA
CTGGAATCCTGCCGTCTACATTCGACATGAGATGCTTGGCGTCGGAATGG
CGTTCTCAAAATGCTCCACTTAGTTTCAATCCATAGAGAGCATGTATACG
TTGTTGTAATAATCCAATAATCCATTGAGCGACTCTCTGACTGGTAGCTC
AGTGGATTATTGGCTATTATTCCAACAAAAGTTAATCCTAGGGTTCGATT
CCTACATGATTGTCCTTCCTGGAAAAGACATATGAAAAATATCCTGCGAA
TGAATGCGAGTGAGTGGCACCCCTATCATGGGTTATACACAGCCAATCAC
CGTATTCACTCGGGCTAGAAGAGCAATAATCCTGACCCCAACAGACTCTA
TGAGAGGTCAACAAAGCCCAAAAACAGAGAGGAACAGAGTCCAACATGCC
ATCAAGAGACCAACGAAACTGTAAAAGGATCACACAACGGGAGACTATTC
GCTTACTCCAACATACATCGCCCCGCCGGAGCCTTAAGTATCTGGAAATC
GAATAATTCATTCTTCTGTATCTCCGAAAACTGAATCGTTCAGACCTATT
TTAAAGATGAGTTATGGGGGTCCATTAACCCGTGTGCCGATAGATGGGCC
TCACACGCGTACAACATAATTATACTCGGTCATGACGCCTGTCGAAGAAT
TTGATATGTTCCCCTAAATCCAGCTGATCTGGAGTATTTCGTGGATGCCT
GACGTGGGGAGCTTGCCCCACAACACATTGAGTACTCAATCTCGTAACAA
TGCACGACCTAGCAAAGGAAAGCTATATCCACTTGCTCGTAGGGGGTGCA
AAGTCATAGCACTTATCAAAGTCGATTGTGTACATGAACCGAGCTCGGTG
AATCATCGACCATCGGTGAGGGAGCGGTAGGTGGACAGGATGCGACTATT
AATATAGCGTTCGGAACAACTTTGTCACGAGAGAGTGACCAATATATGGT
CACGGCTCTCAGAACACTCCGATAAGTCGGCACGACGACAATCCTCATGA
TGTCCTATGATGAAGAGCAGTGTTTCTCTAGACCCAGTAACATCCCGATT
GGCACATTCTTCCGTGGTACGTAGCATGGGGAAAAGTAGTGGTGCTTTCG
TAGAGGAGGCTCGTCAGTCAGTGAGTATTTGTAAGAGGCTCACCTCAGAG
CGGCCAACACAGAGATACACAGGGGGCGGATTGAAGAGTGTCGGTGTAGG
TATTTCCGTCCTTGAACATTTAGTATCAACTTTCCGGTCTCTGGGGTCGA
AGGTGTTCTTAAGATCATCATCAGCCTTGCTTCATTGACCCTGAGTATGG
CCGCGGATATTTGTGATGAGGATTGTCGTGCCGCCTTATGGGAGGATTCT
GAGAGTTATGTTCATACCCTGACCACTCGCTCGTGACAGAGTTGTTCCGA
ACGGTATCTAACGTCGCATCCTGATCACCTACCACTCCCTCTTAGATAGT
TGATGATTCGCCGAGCTCGGTTTGCACAACATCGACTCTGTTGAGTGCCA
GGATGTTGCATTCCCTACTAGTAAGTTGATCTAGCATTACCTACCCTAGG
TGCATCGTCACGAGACTGAGTAGTCAGTGCGTTGCGGAGCAAGCTCCCCA
TGTCAGGCATCTACACTTCCCCCCCCCGGAATGCGTTTGACCACCTTGGA
GATAATAAACTCCTTGGCGGAACGGTGGAGAGGATAGCATTGGATGGAAT
GCCTGACATGGACTATGGGCCTCGTCGGTATTAACGAATGTCCCCTTTAA
CAACAATATCTTGAGATTGGAGCTCTTCATTATTATTGAAACTCTGCGTT
TTTATTGAAGCTCAAGACTTTATCGACGTATCAGACAAGGAGAGCAGCCT
CGAATATTCACCTAATATCCTCACCCCCTCAAAGTCCTTGCCTATACGAA
CACCAAGATACCACCAGATTTCACATCGACACCGTCTAGCGAGAGTTACA
GCGTGACTTTAGCATTTGTAAGATCTGGAACCACTTTCTCGACGTTTGCA
ATATATTCCGTCATCCCTTGTGCCCAACAAGGTCGATTTAAAAGATGGCG
GAACCACTGCGTCCATTTGGGTGAGGGCTTTCAGGGGATATGGCGATGTT
ACGTTATTATTGTTTGAGGTTCTCGTAGTCTGATTGTCGAAGAAGGTTTG
AGCTTCAAATATAACATAGGGCTTCAATATGACCAAAACTGTGTTCATTT
TTATTTAGTCATAAATAATCACTGTTTATCGATAATGTAGGCACGCTTCG
TGCGTGGCTATACGCTGAAAGAACTCCCCCCTTGCTCAGGGTTTTCAGAC
TCCAGTTTAAATAATCGTGTTACATATATACGCGAAAAGAGCCTCACGTT
CCTATTGACGAGTCGGAAGTAACCCAGAAGGCTACTTTACTAGCACACGT
GTCTAATCATCATCTGTCACCAATCAGAGGATATCTCATTCTCCCTACCT
ACCAACCAGTATAGAATCAAGAGTCGGAATTTATACCCATAGTGCCACAA
TACGTACCTCACTTCGTGTCTTTTGCCACCGTCGTTCCCGTTTCGATATA
TATATTTTCCCTTTTCGCACCTTGAGTCTCGTTCCTCACCGCACATCGTG
AATTTATATCTTGCTGTTCCAGTGCCGATTTCAAGGCACAACCC
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig101:90013..95106+

>mRNA_D-dichotoma_M_contig101.160.1 ID=mRNA_D-dichotoma_M_contig101.160.1|Name=mRNA_D-dichotoma_M_contig101.160.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=384bp|location=Sequence derived from alignment at D-dichotoma_M_contig101:90013..95106+ (Dictyota dichotoma ODC1387m male)
ATGTTGCAGCGGTTCCGCGACTTTTTCAATGCTGAGGAGAAGGAGATTGG
GAGGCAAGAACACCCCAAGGCACACGCCTACAAGGGTTGCTTGCGCGAAG
AGGGACAGCTGAAGTACGTTTTCGACCGGAGGCAATGTTATAGACGAGAC
GCACTGGCGGCGCACCTAGGATGTTGCAGCGGTTCCGCGACTTTTTCAAT
GCTGAGGAGAAGGAGATTGGGAGGCAAGAACACCCCAAGGCACACGCCTA
CAAGGGTTGCTTGCGCGAAGAGGGACAGCTGAAGTACGTTTTCGACCGGA
GGCAATGTTATAGACGAGACGCACTGGCGGCGCACCTAGGTGCCGATTTC
AAGGCACAACCCTGCCGATTTCAAGGCACAACCC
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