prot_D-dichotoma_M_contig1112.967.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1112.967.1
Unique Nameprot_D-dichotoma_M_contig1112.967.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length190
Homology
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BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: UPI0014257D9C (uncharacterized protein LOC117106388 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257D9C)

HSP 1 Score: 60.5 bits (145), Expect = 2.040e-7
Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 0 
Query:  123 VVRTSQATFSS-VAMVVPNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY 189
            ++R S++ ++S V +V   G S R+V DYR +N + ++ + PLPR+EEV  +LGGA     LD+  GY
Sbjct:  360 IIRPSKSPYASPVVLVTKKGGSLRLVIDYRKLNSMTIKDSFPLPRIEEVLDLLGGARFFSALDLAHGY 427
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BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A2H9T5C3_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T5C3_9ZZZZ)

HSP 1 Score: 56.6 bits (135), Expect = 4.360e-6
Identity = 42/149 (28.19%), Postives = 69/149 (46.31%), Query Frame = 0 
Query:   46 EQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLM-----VVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY 189
            ++ L PE A  +R+++L      F ++   D L R D++         KP    ++  PR +       +++    +   G++  +S    S V +V     S R   DYRA+N++ V+ A PLPR+ E    L GA    TLD+  GY
Sbjct:  281 KEELTPEQAKQVRQLLLRTQ-DLFAKS--DDDLGRTDMVKHKIDTQNAKP----IKQPPRRFPHHAAEEVDQQVQSMLDRGIIEPSSSPWASGVVLVQKKDGSLRFCVDYRALNKVTVKDAYPLPRIGESLDRLSGAKWFSTLDLFSGY 422
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BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A7S2QTD9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas chlamydogama TaxID=225041 RepID=A0A7S2QTD9_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 6.250e-5
Identity = 26/88 (29.55%), Postives = 47/88 (53.41%), Query Frame = 0 
Query:  102 YSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY 189
            YSQ + A ++     L   G++  +     + V  V   G S R+  D+RA+N+L +++A PLPR++++   L GA    ++D+   Y
Sbjct:    5 YSQLELAEMQRQVDLLLKLGLIEPSVSPWGAPVLFVRKKGGSLRMCVDWRALNKLTIRNAAPLPRIDDIMDRLQGAKVFSSIDLTSAY 92
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI0014257D9C2.040e-741.18uncharacterized protein LOC117106388 n=1 Tax=Annei... [more]
A0A2H9T5C3_9ZZZZ4.360e-628.19Reverse transcriptase domain-containing protein n=... [more]
A0A7S2QTD9_9CHLO6.250e-529.55Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 89..158
e-value: 9.2E-14
score: 53.3
NoneNo IPR availableGENE3D3.30.70.270coord: 159..189
e-value: 9.2E-14
score: 53.3
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 80..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1112contigD-dichotoma_M_contig1112:213536..214131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1112.967.1mRNA_D-dichotoma_M_contig1112.967.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1112 212927..214461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1112.967.1 ID=prot_D-dichotoma_M_contig1112.967.1|Name=mRNA_D-dichotoma_M_contig1112.967.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=190bp
MPSETLSRWRPPTRPRRRWSRTTCFHAHHAWLWSRTGSNAVLLAGEQGLP
PECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPR
VYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSCRIVADY
RAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*
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