mRNA_D-dichotoma_M_contig1107.934.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE) HSP 1 Score: 548 bits (1413), Expect = 2.930e-181 Identity = 304/695 (43.74%), Postives = 434/695 (62.45%), Query Frame = 2
Query: 116 ILCRISRLIDAGISGFSRWFSTNFPTAVRTHTSSQIEEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGVKTHSKQGVSSIEISPGTSFMERAANALEYWAYLKCSNHGSSGVAYHVSGANVPGEGELKCMDWIKLNVKNRDESVVVIGGDADLVLQGMALSQVKNFFVCSTGPGKAGQIVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAKKGIHGASFLLNGAERAFSWDFLLDFFREM-------AHHGDAKDVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRVTAFDPQDVDGSLPPSGITVDTRPRWRSSTYVMGR--TYDFIHTADSKKAAKHQAAELLMKELLPELYEEYLDKETARLLE--------ESLANAPDDRSKMEHEKRKESDSR------VERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVR-KHQGLLGRIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRLVDPDSPVREALQWNERTGSFSVSKILEALHKTAPDELEPFFAKSHARGAWKIISPQSRLCEQLTAPPSAPAGFSDLQP---SRNVN--------MTSVSGTALPPCHDWSDPSDDPELRRQPTNVLEEPYKVAF 2095
+LC+ +AGI+GF +WF FPTAV +S++E FDHV DMNQ+LH+A+ KA+ E HAI+R F +V L P K+VVFAFDGSAP+AKL VQR RRE K +SK +S++ +SPGT FM+ A+A+EY+A+ +C+ GV +++SGANVPGEGELKC+DW+K ++ DES V++GGDADL+LQG+ALS+VKN F+CS + ++ S+WE+VR+LE FPGQS +R DL VL++LNGNDYLPKVRG++F RC+ AY K+G H +FL++G +++ W+FL D +M A A +E +D R+P AG+VF A+ +GKLG ++++ + +V GS SG T +W+S T+V G+ TY F+H KK H AAE L++ELLP+LY+E+L++E AR+LE E + + D+ S E+ + + S VE +L G+LWN+QMY+DG+ P+FYW Y R++PS A+IV+WV+ + L +A PV PPLP S+ACLC++P T+ G+ LP+RL+ LV P SP+ EAL+W + ++KIL+ P EL F +H+ AWK++ L + PP+ P D P SR+ N +TS+S T+ P WS SD Q VL+ PYK A
Sbjct: 10 LLCQAIICAEAGINGFHKWFVQEFPTAVTD--ASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLK-HMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHRDNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLS---DEVSGS---SGGT----KKWKSVTWVRGKEYTYHFLHVG-KKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVV--YLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQ--GVLDLPYKKAL 686
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA) HSP 1 Score: 334 bits (856), Expect = 1.230e-97 Identity = 276/903 (30.56%), Postives = 375/903 (41.53%), Query Frame = 2
Query: 134 RLIDAGISGFSRWFSTNFPTAVRTHTSSQIEEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGVKTHSKQGVSSIEISPGTSFMERAANALEYWAYLKCS-----------NH---------------------------------------------------------------------------------------GSSG------------------------------------------------------VAYHVSGANVPGEGELKCMDWIKLNVKNR-------------------------------------DESVVVIGGDADLVLQGMALSQVKNFFVCSTGPGKAGQIVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAKKGIHG-ASFLLNGAERAFSWDFLLDFFREMAHHGDAKDVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRV-TAFDPQDVDGSLPPSGITVDT----------RPRWRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEYL---DKETARLLEESLAN-------------------APD---------DRSKMEHEKRKESDSR-------VERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRKHQGL-----------LGRIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRLVDPDSPV-----------------REALQWNERTGSFSVSKILEALHKTAPDELEPFFAKSHARGAWKIIS----PQSRLCEQLTAPPSAPA--GFSDLQPSRNVNMTSVSGTALPPCHDWS 2023
+L +AGI GFS+WF F +V Q ++FDHV FDMNQ+LH+AV ++ +E+ AI RTF E+ ++L + EP ++VVFAFDGSAP+AKL QR RREG + + +S++ I+PGT FM AA A+ Y+AY + NH G G V Y++ A+V GEGELK +DW L + +ESVV++GGDADLVLQG+ALS+VKN FV ++ ++G+IVSLW++ R LE FPG+S IR DL+ L+VLNGNDYLPKVRG++FGRC+ Y AK G SF+++ + F+W FLL F + A G A A + PT + A+ K + G K IR +T D PR+ S V G T S+K A+ AA L+++EL PELYE+YL + A+LL + A D D S E+E E D V+ YLTG+LWN+ MY DGF PD YW YGHR+APS ++ WV + L L +A PVS P LP VACL +M + GRD +P RLR L+D DSPV + A + F + +L A++ P+ L F A+ W +I P R C L PP P F + P V ++ T+ PP W+
Sbjct: 17 QLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLK-FATMGAAM-------ALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMM--SAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGF-AEGRQEVKWTVIQHASQPLPRGCTPLNLPPPIPPLDRFLKVSPD-TVKCVTMPATSSPPGRSWA 907
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1) HSP 1 Score: 261 bits (667), Expect = 7.280e-73 Identity = 225/737 (30.53%), Postives = 347/737 (47.08%), Query Frame = 2
Query: 149 GISGFSRWFSTNFPTAVRTHTS-SQIEEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRR--EGVKTHSKQ------GVSSIEISPGTSFMERAANALEYW--AYLKCSNHGSSGVAYHVSGANVPGEGELKCMDWIKLNVKNRDESVVVIGGDADLVLQGMALSQVKNFFVCSTGP----------GKAGQ-------IVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAY--LKAKKGIHGASFLLNGAERAFSWDFLLDFFREMAHHGDAK-DVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRVTAFDPQD-VDGSLPPSGITVDTRPRWRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEYLDKETARLLEESLANAPDDRSKMEHEKRKESDSRVERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRKHQG-LLGRIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRLV---------DPDSPVREALQWNE--------------RTGSFSVSKILEALHKTAPDELEPFFAKSHARGAWKI----ISPQSRLC--EQLTAP--PSAPAG-FSDLQPS-RNVNMTSVSGTALPPCHDWSDPSDDPELRR---QPTNVLEEPYKVAFKWKPRLPRGSKQPRKRMGH 2152
GI+GF RW+ NFP+ V T T S E FDHVLFD+NQ++H+A A++ R F ++ +L P K+V AFDG AP+AKL Q+RRR E K H + GV + +SPGT M+ A+E++ + L+ H V + VSG VPGEGE+K +D+I V + SVVVIG DADLV+ G+A +V+NFFV P G A + ++S+W+ +R L++ FPG++ +R DL+V++++ GNDYLPK+RG +F + AY LK KG +L+ +R+F W+FL + + + E ++ R G EA+ + G S + +D V+ ++ PS + T P D H S + ++L K +PE + DD K+ E +L LLW + MY+DGF PDFY Y + PS+++IV W++++ G L ++ PP+S PPLP A L ++P + LP+ + + V + +S +E RT + +++E + +E+E + + A+ + +S R C Q AP P P F+ L S ++ V T+ PPC W +D E RR + +V YK F K + R S++ RKR+ H
Sbjct: 2 GIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYV-DPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRGKYLVCREQRSFDWEFLYALMKRLINPLVPNLTKELIEMYREASIRG---QEALRLAQAGNASVEASSSCESESKDSVERNVHPSDLEDGTEP-------------DAAHGEISADVTDPE--DILEKVDIPE------------------GISVDDDEKLYD---------TEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPAS--AARLLPQPIFKRVLLRSQQQAENSESAAEMGTNADETAKLITFILQDDGRRTNRSLLLRVVEGIRDDEYEEIEKHRTRLSSSVAFALRQGDMSGNGRTCASSQERAPKLPEPPVQRFAKLSLSGAEFSIEGVQLTSTPPCRSWCWSTDGTEARRTSKKAVSVQNLSYKRVFTRKIQSER-SQRDRKRINH 689
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR) HSP 1 Score: 253 bits (645), Expect = 1.030e-69 Identity = 209/693 (30.16%), Postives = 315/693 (45.45%), Query Frame = 2
Query: 149 GISGFSRWFSTNFPTAVRTHTSSQIEEF-DHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRRE----------------GVKTHSKQ---GVSSIEISPGTSFMERAANALEYWAYLKCSNHGS-SGVAYHVSGANVPGEGELKCMDWIKLNVKNRDESVVVIGGDADLVLQGMALSQVKNFFVCSTG-PGKAGQ----IVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAKKGIHGAS-------FLLNGAERAFSWDFLLDFFREMAHHG-DAKDVEYLDRARRFPTAGAVFHEAIDKGKLG----GTSKVDIRVTAFDPQDVDGSLPPSGITVDTRPRWRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEYLDKETARLLEESLANAPDDRSKMEHEKRKESDSRVERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRKHQGLLGRIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRLVDPDSPVREALQWNERTGSFSVSKILEALHKT--APDELEPFFAKSHARGAWKIISPQSRLCEQLTAPPSAP------AGFSDLQPSRNVNMTSVSGTALPPCHDWSDPSDDPELRRQPTNVLEEPYKV 2089
GI GF +W NFP VR ++ E+ DHV FD+NQ+LH AV KA + + F E++++L + P K+V FAFDG AP+AKL QRRRR GV +K + +E++PG + +++EYWAY + N V +SGA+VPGEGELK +D+ + +SVVV+GGDAD+VLQG+A V+NFFV G G+ ++S+WEL R E+ FP +S +R D ++L +LNGNDY+PKVRGI+ R +H YL K G L++ +R +W F+ M G + ++ + AG V +GK G S+V R+ +D +P + D+ P R F S+ + ++E EE +T L + + D R++ LLWN+QMYVDG+ D+ + YG + P EI+ ++R H G PVS PL A + V+P+ + LP+ L+R+ D VR+ + S+ + + K+ + +EL F + I+ R +QL P S P F ++ + + T+ PPC+ W R N+LE PYK
Sbjct: 2 GIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWPM---FYALMDRVGVPVSSIAEAEQEKESTPAG-VPPRRKRRGKEGYVSYSDSEVGERIVYTGNED---GVPMDCLDDDSVPT---------RDESFSENGVSETDSYEDSSEYNXXXXXXXFDEEQEHIQTLVTLSGNSSKFYD----------------TNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQAPVSNWRPLLPHQAAMAVLPK--QAKHLLPKPLQRIYDDPVAVRKIFGSKDDVDVPSLIAETDRIPKSEFSSEELLRTFHGT------PILLRHQRPQDQL--PYSNPWVRRPGQKFEEIASRPVIYRAPFAVTSAPPCYKWP--------RGTVANLLELPYKT 644
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC) HSP 1 Score: 244 bits (624), Expect = 8.240e-69 Identity = 158/447 (35.35%), Postives = 231/447 (51.68%), Query Frame = 2
Query: 101 LFILGILCRISRLIDAGISGFSRWFSTNFPTAVRTHTSSQIEEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGVKTHSKQGVSSIEISPGTSFMERAANALEYWAYLKCSNHGSSG--VAYHVSGANVPGEGELKCMDWIKLNVKNRD------------------------ESVVVIGGDADLVLQGMALSQVKNFFVCSTGPGKAGQIVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAK-KGIHGASFLLNGAERAFSWDFLLDFFREMAHHGDAKDVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRVTAFDPQDVDGSLPPSGITVDTRPR-WRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEY 1357
L +L +L I ++ GI GF +WF ++ V +S Q EFDHVL D+NQ+ H+A KA+ E HAI+R E+ R L K+VV AFDG AP+AK+ QR+RR K +K ++S+ +SPGTSFM RAA A+ + + + + + + Y+VS + PGEGE+K MDWI + + ES+VV+GGDADLVLQG+AL + +F V ++G VSL + V LE FPGQS +RTD+++L+V+ GNDYL KVRG+TF AY K K F+L + F+W FL F+ ++A D+ L R PT V +E + K K+ PP + + + W ++ + + + + KAAK EL++KE++PE Y Y
Sbjct: 49 LVLLLLLFTILPFVEGGIYGFWKWFRGHYKEVVSKVSSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEKD-AKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYFVSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEFKDQFMLLAENKTFNWPFLQAFYDDLAARSFVDDLSVLLRG---PTPAGVLNELMQKKKV----------------------PPFEMEFEGQASAWTATLTLEEKRFTLSEPQPTMKAAKQAICELVLKEVVPEAYATY 469
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD) HSP 1 Score: 238 bits (606), Expect = 1.360e-64 Identity = 190/651 (29.19%), Postives = 292/651 (44.85%), Query Frame = 2
Query: 233 DHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGV-----KTHSKQGVSSIEISPGTSFMERAANALEYWAYLKCSNHGS-SGVAYHVSGANVPGEGELKCMDWIKLNVKNRD----------ESVVVIGGDADLVLQGMALSQVKNFFVCSTGPGKAGQIVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAKKGIHG--ASFLLNGAERAFSWDFLLDFFREMAHHGDAKDVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRVTAFDPQDVDGSLPPSGITVDTRPRWRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEYLDKETARLLEESLANAP--DDRSKMEHEKRKESDSR---VERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRKHQG-------------------LLG----RIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRL----VDPDSPVREALQWNERTGSFSVSKILEALHKTAPDELEPFFAKSHAR-GAWKIISPQSRLCEQLTAPPSAPAGFSDLQPSRNVNMTSVSGTALPPCHDWSDPS 2032
DHV FD+NQV+H+A+ K+ +E+ + R F ++ L P ++V FAFDG P+AKL QR RR K + + + I+PGT M +AL+Y+A + V +SG +VPGEGE+K DW+ V R+ ESV+VIGGDAD+VLQG+A + ++ FV + G ++S+ LV+ LE FPG+S+ +R D +VL ++NGNDYLPKVRG+ F ++ Y+ KKG +LL+ R F+W FL+ + V +++ + + E D DP ++ ++T D +A AA +P++ ++ D S+ + D S + ES +R +E +L G+LWNVQMYVDGF PD+ + Y +APS I+ WV+ H G +LG I P+S + PL A + ++P + LP ++ L D R+++ E +SK+L+A+ + P L R G +I SR PP A F L+ ++N V+ T PPC W+ S
Sbjct: 23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFACSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQFQGQYLLDSTRRTFNWPFLVALLETIRSVVIEPHVLLAEKSLQVEEPSRMNEEEHD--------------VPPDPNEI-----------------------------ILYTGDMTASASTSAA-------IPDVDDDEEDHADXXXXXXSVGDDGEYDYESAYDETNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLP--SSASHLLPGPIQELGASCTALDRARRDSMYLRE------LSKVLDAVD-SIPRSLYTRAELRRTRFGNVHLIRKTSRPRAASQLPPPPVARFRSLRVPSHLNRMLVTTTTAPPCLRWTSAS 614
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD) HSP 1 Score: 238 bits (608), Expect = 1.420e-64 Identity = 203/717 (28.31%), Postives = 328/717 (45.75%), Query Frame = 2
Query: 149 GISGFSRWFSTNFPTAVRTHTSSQI-EEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRR--------EGVKTHSKQGVSSIEISPGTSFMERAANALEYW--AYLKCSNHGSSGVAYHVSGANVPGEGELKCMDWIKLNVKNRDESVVVIGGDADLVLQGMALSQVKNFFVCSTGPGKAGQI-----------------VSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAY--LKAKKGIHGASFLLNGAERAFSWDFLLDFFREMAHHGDAKDVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRVTAFDPQDVDGSLPPSGITVDTRPRWRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEYLDKETARLLEESLANAPDDRSKMEHEKRKESDSRVERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRKHQG-LLGRIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRLV---------DPDSPVREALQWNE--------------RTGSFSVSKILEALHKTAPDELE---PFFAKSHA-----RGAWKIIS-PQSRLCEQLTAPPSAPAG-FSDLQPSR-NVNMTSVSGTALPPCHDW--SDPSDDPELR-RQPTNVLEEPYKVAF 2095
GI+GF RWF FP+ T T + E FDHVLFD+NQ++H+A AK+ R + ++++L P ++V AFDG AP+AKL Q+RRR ++ + GV + +SPGT M+ A+E++ + L+ + + + VSG VPGEGE+K +D+I V+ SV+VIG DADLVL G+A ++++FFV P ++ Q+ +S+W+ +R L++ FPG++ +R DL +L+++ GNDY+PK+RG +F + AY LK ++G +LL G +R + +FL + + + + L + A E +L T R A + D D + ++ D +K + KE E + D + + E+ D E+ E +L LLW + MYVDGF PDFY+ Y + PS+ +IV W+++ G + + PP+S PPLP A L ++P T LP L + V +P++ + +E RT + +++E + + ++LE F S A RGA S P ++ P P F+ L PS + + +V T+ PPC+ W +P P+ P ++ P+K AF
Sbjct: 2 GIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEPH-HSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKMRQGPMSGRYLLCGEQRTINLEFLYALMSSLENPLVPQLTKQL--VEMYREASIRGQEMARLAELEST-----RTGATETPDNDS---------------------ISDVEQILYNGDLEKPSP-------CKETTKEPVIDMTDPDDMLEMVETPEGVSYDND--------ETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPST--AAKLLPRPLYKRVLLRARGSDENPENAGLSGMMSDETAKLITFILRDDGRRTNRTILLRVIEKIPENEYEDLEIPRTRFGSSVAFELTCRGANSRKSDPSTKYTASYETLPKPPVQRFAKLSPSWIDFFIQTVQFTSAPPCYSWCWENPKKGPKCDDTAPISIQSLPFKRAF 672
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC) HSP 1 Score: 211 bits (537), Expect = 2.470e-59 Identity = 112/249 (44.98%), Postives = 163/249 (65.46%), Query Frame = 2
Query: 251 MNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGVKTHSKQGVSSIEISPGTSFMERAANALEYWAYLKC-SNHGSSGVAYHVSGANVPGEGELKCMDWIKLNVKNR-DESVVVIGGDADLVLQGMALSQVKNFFVCS-------------TGPGKAGQIVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAKK--GIH 946
MN +LH A KAK +HAI R + E++ L + P+K+VV AFDG P+AKL QR+RR SK +S + I+PGT FM+ A EY+A L+ ++ VA+++SGA+V GEGE+K ++WI ++N+ DE ++++GGDADLVLQG+A+ +VK+ FV + G ++S+WE+VR+LE+ FPGQS+ +R DL+VLM++NGNDYLPKVRG +F + AY K K G+H
Sbjct: 1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVKAMIGVH 249
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A7S2ZT58_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT58_9RHOD) HSP 1 Score: 191 bits (486), Expect = 4.850e-49 Identity = 151/560 (26.96%), Postives = 247/560 (44.11%), Query Frame = 2
Query: 149 GISGFSRWFSTNFPTAVRTHTSSQIEEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGVKTHSKQGVSS-----IEISPGTSFMERAANALEYWAYLKCSNHGSSG-VAYHVSGANVPGEGELKCMDWIKLNV--KNRDESVVVIGGDADLVLQGMALSQVKNFFVC--STGPGKAGQIVSLWELVRNLEQRFPGQSEYIRTDLMVLMVLNGNDYLPKVRGITFGRCYHAYLKAKKGIHGASFLLNGAERAFSWDFLLDFFREMAHHGDAKDVEYLDRARRFPTAGAVFHEAIDKGKLGGTSKVDIRVTAF-DPQDVDGSLPPSGITVDTRPRWRSSTYVMGRTYDFIHTADSKKAAKHQAAELLMKELLPELYEEYLDKETARLLEESLANAPDDRSKMEHEKRKESDSRVERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRKHQGLLGRIAPPVSCIPPLPCSVACLCVMPRTNHGRDCLPERLRRLVDPDSPVREALQWNERTGSFSVS 1795
GISGF +W T FP AV S + FD+V D+N VLH +++ + FAE++R+L + +P K VV A DG AP+AK+ R+RRE + + +S +E +PGT+ M + N++EY+ + N G + + SG+NV GEGE+K +D++ L V KN + SVV+IGGD+D++LQ + Q+ NFFV S GP + L+ +L G ++ R D ++L +L+GNDYLPK+RG + Y + ++ + ++ G +W+ + +D+ R K+ S+ V AF Q+ DG E L DD ++E + D VE Y+ GLLWN+QMY+DG+PPD + Y ++AP ++ + + +G+ ++ PVS P + +A ++P + P RL+ LV + + + ++ +R S
Sbjct: 2 GISGFQKWIRTTFPEAVDDVPESAGDRFDYVCIDVNHVLHSVANRSPDHQLLPLLLFAELDRLLKACQPLKAVVLAMDGPAPLAKVATARKRREQYVSRKQYNNASGHDYYLEFTPGTAMMHQLGNSIEYFICQRLLNGSKFGKIDFVFSGSNVHGEGEIKILDYLNLCVAPKNENSSVVIIGGDSDIILQALCTPQIYNFFVYFRSGGPTSCVSV----RLLGSLIDEVLGDNQ--RLDFVLLCLLSGNDYLPKLRGYNLSKAMKKYSRIRRRTKQS--VIGGPPLGINWETF---------------CQVIDKHNRM-------------AKMAKASRSSSSVNAFPSAQEEDG--------------------------------------------------------------------EDLDGVDDD--ELEDDAVLTGDYDVETYIKGLLWNMQMYIDGYPPDQLFYYRFKYAPPVDAVLDFFLE-KGMYTQVDLPVSNRPAITSQLALTLMLP--SAAWSLAPGRLQPLVKSGASISDFVEVRKRVQEIPFS 452
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Match: A0A7S4K324_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K324_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.060e-46 Identity = 194/727 (26.69%), Postives = 288/727 (39.61%), Query Frame = 2
Query: 149 GISGFSRWFSTNFPTAV--------RTHTSSQ--------------------------------------IEEFDHVLFDMNQVLHIAVSKAKSEKHAIQRTFAEVERMLMSYEPSKNVVFAFDGSAPVAKLCVQRRRREGV-----------------------------------------------KTHSKQGVSSIE----------ISPGTSFMERAANALEYWAYLKCSNHGS----------------SGVAYHVSGANVPGEGELKCMDWI----KLNVKNRDESVVVIGGDADLVLQGMAL--SQVKNFFVC--STGPGKAGQIVSLWELVRNLEQRFP---GQSEY-IRTDLMVLMVLNGNDYLPKVRGIT-FGRCYHAYLKAKKGI------------------------------HGAS----FLLNGAERAFSWDFLLDFFREMA-HHGDAKDVEYLDRARRF---PTAGA------------VFHEAI--DKGKLGGTSKVDIRV------------TAFDPQDVD--------GSLPPSGITVDTRPRWRSSTYVMGRTYDF--IHTADSK-KAAKHQAAELLMKELLPELYEEYLDKETARLLE--ESLANAPDDRSKMEH-------------------------------------EKRKESDSRVERYLTGLLWNVQMYVDGFPPDFYWEYGHRFAPSSAEIVTWVRK 1591
GI GF WF + FP AV RT +SS +E FDHVL D+NQ+LH ++ +A+SE H++ E++R L P K+VV AFDG AKL QRRRR GV K+ K+G + +E I+PGT ++ERA +A YWA+ + SN S SGV ++S + VPGEGE+K +DW+ V SV ++GGD+DLV+QG+ + S N FV G G+ +SLWE R L P G+ +RTDL++L+++NGNDYLPK+RG + F + +H YL+ K HG FL++ F+ F L FFR +A V+ + R++ P +G + E + D G G+ T F+ V+ G PP+G T + SS +G+ + F +H A + K A + +++L+ + Y D + L+E E N D +H E R ++S VERYL GL+WN+Q Y DG P++ + YG R +P ++E+V ++R+
Sbjct: 96 GIRGFRAWFESAFPDAVTRMPPAPYRTPSSSSAAVSRGVKDGSRGKHTKQRRSGXXXXXXXXXXXKRRVHVEPFDHVLVDVNQLLHTSLRRARSEDHSLLLVVRELDRCLEQCRPIKSVVLAFDGPPSAAKLATQRRRRYGVLMRGEQYKKQLEYFARRGVVGPGHEDWDDYMENGGSIDGNSVGVASDKSRKKKGTTRLERYARDERTLCITPGTEYLERAESAFLYWAWQRLSNRRSRLSYTGDIDKDGKGSRSGVRVYISPSAVPGEGEVKLLDWLYQASAARVVLPSHSVAILGGDSDLVVQGLVVPPSVTHNVFVILPQDGKGRFSHCISLWETTRTLAAYLPKLRGEDIMRVRTDLVLLLIMNGNDYLPKLRGSSGFNKLFHTYLRLLKEWLDGGGDKVDISGEDSPTAVKDRNPEHSPHPHGTRRPRPFLVDPDCLEFNVPFCLAFFRRLAAQEPKLAPVDMMGEWRKYSITPLSGLNNLVDGGFLPRPIGWEVVPWDSGSGDGSDSTXXXXXXXXIEHSSAGHTDFEADSVEKEIVRLTLGDPPPNGST--GKHGNDSSMKGVGKFFSFETVHRARRPIQKTKQLLAAMALEDLVGKDYMSMYDYDLGNLVEDEEDDENGGDKHDNCQHAVNGSDDAEVDEDGEEGGGEVSNGEGMSVGPMSGYDWEVRTPAESSVERYLEGLIWNLQTYGDGICPNYAYNYGRRMSPGASELVEYLRE 820 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1107.934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1107.934.1 >prot_D-dichotoma_M_contig1107.934.1 ID=prot_D-dichotoma_M_contig1107.934.1|Name=mRNA_D-dichotoma_M_contig1107.934.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=766bp MYIYRFLFILGILCRISRLIDAGISGFSRWFSTNFPTAVRTHTSSQIEEFback to top mRNA from alignment at D-dichotoma_M_contig1107:138722..226660- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1107.934.1 ID=mRNA_D-dichotoma_M_contig1107.934.1|Name=mRNA_D-dichotoma_M_contig1107.934.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=87939bp|location=Sequence derived from alignment at D-dichotoma_M_contig1107:138722..226660- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1107:138722..226660- >mRNA_D-dichotoma_M_contig1107.934.1 ID=mRNA_D-dichotoma_M_contig1107.934.1|Name=mRNA_D-dichotoma_M_contig1107.934.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=4596bp|location=Sequence derived from alignment at D-dichotoma_M_contig1107:138722..226660- (Dictyota dichotoma ODC1387m male)back to top |