mRNA_D-dichotoma_M_contig1106.928.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: A0A6H5JQT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT1_9PHAE) HSP 1 Score: 160 bits (406), Expect = 5.410e-46 Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 2
Query: 68 GDGLLRVAHACETMLAGFESGQAAALKSCLVSKERAISVSELNGAARSRSSSSDGGTWEP-----PRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPLRARLTSGISEG 556
G+ LLRV+ ACET+L+GF +G+AAA+ SC+VS++ A+ +SE + +R+ D G P D L PLE AM NRRARPS+L+PAWRAVG+AVG ATALLP +T AKV AIS AV+E YD+NIR++YDA + EEQE+KELFKAQRD+ R L+SG G
Sbjct: 10 GNSLLRVSQACETLLSGFNNGKAAAVGSCVVSRKHAVKLSERD---TTRAGDVDKGPEGEARHMGPSDHLLPLESAMANRRARPSLLLPAWRAVGFAVGTGATALLPAETSAKVGAAISRAVLEHYDENIRAMYDARIVNEEQEVKELFKAQRDELSRVALSSGAGPG 174
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: D7FX83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX83_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 1.380e-19 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 2
Query: 281 MVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQE 484
M NRRARPS+L+PAWRAVG+AVG ATALLP D AKV AIS AV+E YD+NIR++YDA + EE E
Sbjct: 1 MANRRARPSLLLPAWRAVGFAVGTGATALLPADASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHE 68
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: A0A8B7ALB4_ORYAF (ubiquinone biosynthesis protein COQ7 homolog n=2 Tax=Eutheria TaxID=9347 RepID=A0A8B7ALB4_ORYAF) HSP 1 Score: 53.1 bits (126), Expect = 1.710e-5 Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELF 499
W+ +D L E MV R RP+IL+P W VG+A+G + TALL + A+ ++ Y++ IR+L + + K E+ ++++F
Sbjct: 49 WDQEKDHLKKFNELMVAFRVRPTILMPFWNVVGFALG-AGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDLEKYEELLQKMF 134
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: H3A8N6_LATCH (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A8N6_LATCH) HSP 1 Score: 53.9 bits (128), Expect = 3.010e-5 Identity = 33/95 (34.74%), Postives = 53/95 (55.79%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPL 523
W+ +D L E MV R RP+IL+P W VG+A+G + TALL + A+ ++ E Y++ IR+L + K + E+ E+ K RD+ +
Sbjct: 94 WDQEKDHLQKFNELMVEHRVRPTILLPFWNVVGFALG-AGTALLGKEGAMACTVAVEESISEHYNNQIRTLMEEDPEKYK-ELLEMIKKFRDEEM 186
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: A0A7J7XY21_MYOMY (Coenzyme Q7, hydroxylase n=1 Tax=Myotis myotis TaxID=51298 RepID=A0A7J7XY21_MYOMY) HSP 1 Score: 51.2 bits (121), Expect = 8.230e-5 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPL 523
W+ +D L E MV R RP+IL+P W VG+A+G + TALL + A+ ++ Y++ IR+L + K E E+ ++ K RD+ L
Sbjct: 5 WDQEKDHLKKFNELMVAFRVRPTILMPFWNVVGFALG-AGTALLGREGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYE-ELLQVIKRFRDEEL 97
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: UPI00094478D7 (5-demethoxyubiquinone hydroxylase, mitochondrial isoform X2 n=1 Tax=Rhinolophus sinicus TaxID=89399 RepID=UPI00094478D7) HSP 1 Score: 52.4 bits (124), Expect = 8.500e-5 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPL 523
W+ +D L E MV R RP+IL+P W VG+A+G + TALL + A+ ++ Y++ IR+L + K E E+ ++ K RD+ L
Sbjct: 73 WDQEKDHLKKFNELMVTFRVRPTILMPFWNVVGFALG-AGTALLGKEGAMACTVAVEESIARHYNNQIRTLMEEDPEKYE-ELLQVIKKFRDEEL 165
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: G3QJN6_GORGO (5-demethoxyubiquinone hydroxylase, mitochondrial n=32 Tax=Boreoeutheria TaxID=1437010 RepID=G3QJN6_GORGO) HSP 1 Score: 52.4 bits (124), Expect = 9.770e-5 Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPL 523
W+ +D L E MV R RP++L+P W +G+A+G + TALL + A+ ++ Y++ IR+L + K E E+ +L K RD+ L
Sbjct: 87 WDQEKDHLKKFNELMVTFRVRPTVLMPLWNVLGFALG-AGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYE-ELLQLIKKFRDEEL 179
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: COQ7_HUMAN (5-demethoxyubiquinone hydroxylase, mitochondrial n=17 Tax=Simiiformes TaxID=314293 RepID=COQ7_HUMAN) HSP 1 Score: 52.4 bits (124), Expect = 9.770e-5 Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPL 523
W+ +D L E MV R RP++L+P W +G+A+G + TALL + A+ ++ Y++ IR+L + K E E+ +L K RD+ L
Sbjct: 87 WDQEKDHLKKFNELMVTFRVRPTVLMPLWNVLGFALG-AGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYE-ELLQLIKKFRDEEL 179
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Match: A0A671FTE4_RHIFE (5-demethoxyubiquinone hydroxylase, mitochondrial n=4 Tax=Microchiroptera TaxID=30560 RepID=A0A671FTE4_RHIFE) HSP 1 Score: 52.4 bits (124), Expect = 9.770e-5 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 239 WEPPRDLLPPLEEAMVNRRARPSILVPAWRAVGYAVGKSATALLPVDTLAKVQDAISSAVVEQYDDNIRSLYDASMSKEEQEMKELFKAQRDDPL 523
W+ +D L E MV R RP+IL+P W VG+A+G + TALL + A+ ++ Y++ IR+L + K E E+ ++ K RD+ L
Sbjct: 87 WDQEKDHLKKFNELMVTFRVRPTILMPFWNVVGFALG-AGTALLGKEGAMACTVAVEESIARHYNNQIRTLMEEDPEKYE-ELLQVIKKFRDEEL 179 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1106.928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1106.928.1 >prot_D-dichotoma_M_contig1106.928.1 ID=prot_D-dichotoma_M_contig1106.928.1|Name=mRNA_D-dichotoma_M_contig1106.928.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=218bp MAGRSFATSAASKASHHAKGDGLLRVAHACETMLAGFESGQAAALKSCLVback to top mRNA from alignment at D-dichotoma_M_contig1106:91686..97453- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1106.928.1 ID=mRNA_D-dichotoma_M_contig1106.928.1|Name=mRNA_D-dichotoma_M_contig1106.928.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=5768bp|location=Sequence derived from alignment at D-dichotoma_M_contig1106:91686..97453- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1106:91686..97453- >mRNA_D-dichotoma_M_contig1106.928.1 ID=mRNA_D-dichotoma_M_contig1106.928.1|Name=mRNA_D-dichotoma_M_contig1106.928.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1308bp|location=Sequence derived from alignment at D-dichotoma_M_contig1106:91686..97453- (Dictyota dichotoma ODC1387m male)back to top |