prot_D-dichotoma_M_contig1106.927.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1106.927.1
Unique Nameprot_D-dichotoma_M_contig1106.927.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length268
Homology
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BLAST of mRNA_D-dichotoma_M_contig1106.927.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.490e-16
Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 0 
Query:   25 LSLHIRCIAGEDMVNMYIALLDGTVINLNRSSEDQMENTLRRLAIALRKRQR----KVGGGESARTPAADATPLSQNRGGKKRPNKATASLGEAAGESGVAAMVISKRTGEVLELNGATNGEGWVRLCG 149
            L LH+RC+ GED V +Y+AL DG  ++ NR S+  M +TLRRL++ ++KR+R    K  G    +   +          GKK P      +G   GE   AA+   K TGE +E++GA NG+GWVRLCG
Sbjct:   14 LELHVRCVPGEDKVQLYLALRDGNTLSFNRPSDSDMASTLRRLSLTVQKRRRLTDKKKKGANGGKAKGS----------GKKGPQSGKGGVGN--GEELTAAL-FDKGTGESIEVDGALNGDGWVRLCG 129
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BLAST of mRNA_D-dichotoma_M_contig1106.927.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.390e-11
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:  203 YLHLDVVLNPPAVTSLECVVASPLTGFSILPRAEVEFGAGVDWEWLRE 250
            +L +DVV+NPPAVTSLEC +A P+ GFS++ +AEVEFG G+ WEWL E
Sbjct:  234 FLEMDVVVNPPAVTSLECSIAQPMAGFSVVAQAEVEFGTGMGWEWLIE 281
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1106.927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYP3_ECTSI2.490e-1641.09Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JRV9_9PHAE2.390e-1164.58Endo/exonuclease/phosphatase domain-containing pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1106contigD-dichotoma_M_contig1106:44992..54397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1106.927.1mRNA_D-dichotoma_M_contig1106.927.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1106 44992..54397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1106.927.1 ID=prot_D-dichotoma_M_contig1106.927.1|Name=mRNA_D-dichotoma_M_contig1106.927.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=268bp
METSAVTEDGSLSVDGYSRPSQANLSLHIRCIAGEDMVNMYIALLDGTVI
NLNRSSEDQMENTLRRLAIALRKRQRKVGGGESARTPAADATPLSQNRGG
KKRPNKATASLGEAAGESGVAAMVISKRTGEVLELNGATNGEGWVRLCGA
DAAPAAVAAQHPIMVQVGPFPFPPSSIPGLPSTTSVPAGEDPMERDPNDS
DLYLHLDVVLNPPAVTSLECVVASPLTGFSILPRAEVEFGAGVDWEWLRE
SDAKAGDAGGDGAQAGGG
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