prot_D-dichotoma_M_contig1106.926.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1106.926.1
Unique Nameprot_D-dichotoma_M_contig1106.926.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length313
Homology
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A6H5JQU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU5_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 2.240e-155
Identity = 231/312 (74.04%), Postives = 258/312 (82.69%), Query Frame = 0
Query:    1 MSRSTLAGLNISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKAPREKGTDGEPEVGASGVGFL 312
            MSRSTL GLN S+SER+YV LGVELG RGDGRGRLDYR+LSVQAGVLAQ+NGSARVTIAHNGTDVLA VKVEVGEP + AP  GR+E C+ CSNSLFPKFDERSS DVNA LS ALERSM   GG+DLD+LGIV+GKFCWV+FVD+LVLQA      DGNLLDASSFAA+TALNT R+PKVTPLVGEGG  DDFE+SS++ +AV I G   VP+CLTMS + GHFI+DAS+EEEACVEAS+ VFVDR GR+CGSRKEG GSVP QHLGGMAQCA A+ K VF ILD   S A   +G  G  EVGA+G GFL
Sbjct:    1 MSRSTLTGLNTSSSEREYVALGVELGMRGDGRGRLDYRSLSVQAGVLAQSNGSARVTIAHNGTDVLAAVKVEVGEPGLEAPGAGRVEVCISCSNSLFPKFDERSSGDVNAVLSGALERSMRGVGGLDLDALGIVDGKFCWVVFVDILVLQA------DGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSNIDDAVAIKGATNVPVCLTMSRVGGHFIVDASLEEEACVEASVAVFVDREGRVCGSRKEGDGSVPAQHLGGMAQCAAAMAKGVFAILD---SSAGAARGGTGA-EVGAAGAGFL 302          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: D7FYR5_ECTSI (RNase_PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR5_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 4.320e-112
Identity = 169/219 (77.17%), Postives = 187/219 (85.39%), Query Frame = 0
Query:    1 MSRSTLAGLNISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMS 219
            MSRSTL GLN S+SER+YV LGVELG RGDGRGRLDYR+LSVQAGVLAQ+NGSARVTIAHNGTDVLA VKVEVGEP + AP  GR+E CV CSNSLFPKFDERSS DVNA LS ALERSM   GG+DLD+LGIV+GKFCWV+FVD+LVLQA      DGNLLDASSFAA+TALNT R+PKVTPLVGEGG  DDFE+SS++ +AV I G   VP+CLTMS
Sbjct:    1 MSRSTLTGLNTSSSEREYVALGVELGMRGDGRGRLDYRSLSVQAGVLAQSNGSARVTIAHNGTDVLAAVKVEVGEPGLEAPGAGRVEVCVSCSNSLFPKFDERSSGDVNAVLSGALERSMQGVGGLDLDALGIVDGKFCWVVFVDILVLQA------DGNLLDASSFAAYTALNTARIPKVTPLVGEGGIYDDFEISSEIDDAVAIKGATNVPVCLTMS 213          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A7S2Y3L9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3L9_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.120e-83
Identity = 140/280 (50.00%), Postives = 188/280 (67.14%), Query Frame = 0
Query:   11 ISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGG-TVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAI 289
            IS+SE+QY+ LGVE G R DGRG +D+R + V+ GV  Q NGS RV I H  T V+A VK EVGEP+   P  GR+   VE S S+FPKFD+R +AD+ A  + AL R +  +  +D  SL I+ G+FCWV++VD+LVL      RADGN+LDA+SFAA+ ALNT RVPK+T + GE G + DDFE+SSDV ++VP++  + VP+C+T+S +   F++DA+  EE C     TV V+R GR+CG RK GAG +PL  L  + Q A      +F  L+AAI
Sbjct:    6 ISSSEKQYIILGVEQGVRCDGRGCMDFRPMEVETGVFPQANGSVRVKIDHGATSVIAVVKCEVGEPSPSRPREGRVVVGVEISGSMFPKFDDRHAADLQAEATGALARVIQDSSTMDTHSLCIIPGRFCWVVYVDILVL------RADGNVLDATSFAAYAALNTARVPKLTVVPGEAGASEDDFELSSDVADSVPLLA-QDVPVCITLSLVGRQFLVDATGAEEDCASCGATVAVNRQGRVCGLRKIGAGGLPLPALPQLLQGAQQTASLLFPSLEAAI 278          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A7S3XUS1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS1_HETAK)

HSP 1 Score: 223 bits (567), Expect = 1.470e-68
Identity = 110/241 (45.64%), Postives = 160/241 (66.39%), Query Frame = 0
Query:   12 SASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRIC 252
            S SE++Y+ LGVE G R DGRGRLDYR ++++  +L Q NGSARVTI+H  T V+A  KVEVG+P    P  GR+    E SN+LFP+ D+R++ + NA L+ AL R +  +  +DL+ L I+ GKFCWVI +DVL+L +      +GN+LD +S AA+  LNTTR+PK T    EGG   DF++SSD  +A  + G + +P+ +T++ +  H+++DA+  EE C  A + V  +R G+IC
Sbjct:    9 SRSEKEYILLGVEQGIRTDGRGRLDYRPVAIETNILPQANGSARVTISHGATTVIAASKVEVGKPDPRRPREGRVSVGAEVSNALFPRADDRANLEANAELASALTRIIVNSDTLDLEQLCIIPGKFCWVIHLDVLILSS------NGNILDPASMAAYVTLNTTRIPKTTVFELEGGGGQDFDISSDFADAELVPGADLLPVAVTLAKVGAHWVVDAAGAEEGCAGARVAVAANRRGKIC 243          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A7S1GE40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE40_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.840e-66
Identity = 121/279 (43.37%), Postives = 170/279 (60.93%), Query Frame = 0
Query:   14 SERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKA 292
            +ER +V  GV+ G RGDGRGRLDYR +SV AG+LAQ NGSARVT+ +  TDVL  VK E+ EP+  AP  GR+E  V C +S  P+F+ R +  +NA L+ ALER++  +G IDL SL ++ G+ CWV++VDV+VL +       G++ DA S AA  AL  TR+P++  + GE     D E+  D   AV + G+E +P+ +T   + G  ++DAS EEE C  A + V V+R GR+C     G G V    L    + A  V  R+   +DAA+ K+
Sbjct:    2 AERAFVQAGVDAGVRGDGRGRLDYRFVSVDAGLLAQANGSARVTLVNAATDVLGAVKAELAEPSPDAPDAGRVECSVACWSSASPQFEGRGADAINAQLTAALERTLGSSGAIDLKSLCVIPGRMCWVLYVDVIVLDS------GGSIDDAVSLAAHAALRDTRLPRLYVVPGETEEEADVEVEEDPAAAVAL-GVEALPVTITFFQLGGKTVVDASGEEEVCATARVLVSVNRAGRVCAVETSGRGGVAPAVLHASLEAARQVSARLIARVDAALEKS 273          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A835YWB1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB1_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.760e-65
Identity = 110/189 (58.20%), Postives = 136/189 (71.96%), Query Frame = 0
Query:   25 LGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEG-GTVDDFEMSSDVTEAVPIVGIEKV 212
            LG   DGRG LDYR++SVQ  VL Q NGSAR+TIAH GT+VLA VK+E G P+  AP  GR+E CVECSNSLFP FD+RS  DVNAALS  L R++  +G +DL SL I+ G+FCW++++DVLVLQA      DGNLLDA+SFAA+ A NT  VP+ T + GEG G  DDFE+  D+  A  + G +KV
Sbjct:    4 LGGVQDGRGWLDYRSISVQGEVLPQANGSARITIAHGGTEVLAAVKIETGVPSADAPHEGRVEVCVECSNSLFPTFDDRSGGDVNAALSLMLARTVVESGALDLKSLCIIPGRFCWIVYLDVLVLQA------DGNLLDAASFAAYVAFNTALVPRTTVISGEGAGVEDDFEIDGDLNTATRLPGADKV 186          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A7S2BM69_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM69_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.870e-60
Identity = 122/317 (38.49%), Postives = 186/317 (58.68%), Query Frame = 0
Query:    3 RSTLAGLNISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHN-----GTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSA--DVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKAPREKGTDGEPEVGASGVGFL 312
            R T+   + +A+E+ + TLGVE   R DGR RLDYR L+V  GVL Q +GSARVT+  +     GTD LA VK E+  PA  AP +G +   V+C+ SLF   + R  A  DVNA LS A+ R ++ +  + L+SL ++ G+F W +F+DV+V          GN+LD  S A ++AL+TTR+PK+ P+  E G  DDFE+ S+   + P+  IE+VPI +T++ I    ++DA+  EEAC    ++V V+R G  CG  + G+ ++P   +  +  CA+     +FE L+AA  ++ ++ G    P++     GF 
Sbjct:   16 RRTMIATSAAATEKAFATLGVEQNIRNDGRDRLDYRDLAVDNGVLPQAHGSARVTVGRDLVGGGGTDALAAVKAELATPAQEAPGQGFVVVSVDCAPSLFIHANNRRDARDDVNAELSAAMGRLLSSS--LALESLCVMHGRFAWRLFIDVMVFSTA------GNVLDVVSMAVWSALSTTRLPKLVPIKAEAGFPDDFELDSNQENSQPL-DIEQVPISVTLNIIGTEHVVDAAPLEEACAATRVSVGVNRRGDFCGVYQAGSSALPATRIPELMGCALGTASTLFEGLEAAAKQSTKQAGE--HPDLLPMAAGFF 321          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A1Y1I1Z2_KLENI (3'-5'-exoribonuclease family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1Z2_KLENI)

HSP 1 Score: 197 bits (500), Expect = 7.140e-58
Identity = 112/287 (39.02%), Postives = 170/287 (59.23%), Query Frame = 0
Query:   11 ISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMA-----CAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKA 292
            +SA+E  ++  G+    R DGRGR D+R+ S+Q  V++Q +GSARV +    TD+LA++K E+G P    P  GR+E  VE S +  P+F+ R   +++A L +ALERS A         +DL +L +VEGK CWV++ DVLVL A      DGN+LDAS+     AL+ TR+PKV  L GEG    + E++ D  E    V    VP+ +T++ +  H+I DA+ +EEA + ++++V V+  G++CG  K G+  +    +  M   A  +GKR+   +DA IS A
Sbjct:    4 LSAAELSFLEGGIAQDLRNDGRGREDFRSFSIQLDVISQASGSARVRL--GATDILASIKAELGSPPAEFPHLGRLELAVEISPTAGPEFEGRGGEELSAELGKALERSFAGGANGTGAAVDLAALSVVEGKTCWVLYADVLVLNA------DGNILDASAIGIKAALSNTRIPKVEVLAGEGDEEGELELNDDPDECAR-VSTAAVPLIVTLTKVGRHYIADATGDEEAQMSSALSVAVNEKGQLCGVTKRGSAGIDPSVISDMLSVARRIGKRLLAKVDAEISLA 281          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: A0A5D6XYY3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYY3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 9.500e-57
Identity = 125/304 (41.12%), Postives = 170/304 (55.92%), Query Frame = 0
Query:    9 LNISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKAPREKGTDGEPEVGASGVGFL 312
            L ISASE+QYV  G+    R DGR RL YR+L+V+  +LAQ+NGSARVT+ H+GTDVLA+VK+EV  P   AP  G +   V CS S+  K   R++ ++N  LS+ L R +  A   DL S  IV G+  W IFVDV+V ++       GNL D  S A + ALN T  P V  LVG  G     E+ +D   A   +     P+C+T+  +  HFI D  +EEE C+ A M+V VD  G +CG +K GAG++ ++ +  M   A A  K +F+ L AA+    +     G        VGFL
Sbjct:    4 LQISASEQQYVAEGIAADVRADGRARLAYRSLAVETSLLAQSNGSARVTLEHSGTDVLASVKLEVTSPRPEAPDAGVVTVNVSCSPSVSAKLAGRAAEELNVELSQQLTRLLCSAA--DLSSYCIVPGESVWGIFVDVVVFES------TGNLPDLISMAVYAALNDTVFPAVR-LVGVEGEDRTIEVETD-PAAGKRMAAAHWPLCITLCKVGAHFITDPMLEEELCMTAQMSVAVDPSGNVCGVQKSGAGAIDMREMQSMVDEACARSKDLFKQLQAALQLQRKRDARAGHK---LERVGFL 294          
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Match: K3X0U9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0U9_GLOUD)

HSP 1 Score: 190 bits (482), Expect = 4.200e-55
Identity = 117/304 (38.49%), Postives = 168/304 (55.26%), Query Frame = 0
Query:    9 LNISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQTNGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKFDERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDVTEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGRICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKAPREKGTDGEPEVGASGVGFL 312
            L ISASE++Y+  GVE   R DGR RL YR L ++  +L Q+NGSARV++ ++GTD+LA+VK+EV  P   AP  G ++  V CS S+  K   R++ ++N  LS+ + R +      DLD   IV G+  W I VDV+V ++       GNL D  S A + ALN T  P V  LVG  G     E+ +D   A  ++     PIC+T+  I  +FI D   EEE C  A M+V VD  G++CG +K G+G++ ++ +  M   A A  K +F++L AA+    +     G        VGFL
Sbjct:    2 LKISASEQKYIVEGVEANVRADGRSRLAYRNLVIETSLLTQSNGSARVSLENSGTDILASVKLEVTTPKPEAPNAGIVQVAVSCSPSVSAKLSGRAAEEMNVELSQLMTRLLCSCPSADLDQYCIVPGESVWGINVDVVVFES------TGNLPDLISMAIYAALNDTIFPSVR-LVGVEGEDKTIEVETD-PAAGKLMAAANWPICVTLCKIAAYFITDPMQEEELCTTAQMSVAVDPNGKVCGVQKSGSGAIDMREMQAMVDEASARSKDLFKLLQAALQLQRKRDARAGHK---IERVGFL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1106.926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQU5_9PHAE2.240e-15574.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYR5_ECTSI4.320e-11277.17RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2Y3L9_9STRA1.120e-8350.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XUS1_HETAK1.470e-6845.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1GE40_9STRA1.840e-6643.37Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835YWB1_9STRA1.760e-6558.20Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S2BM69_9STRA1.870e-6038.49Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1Y1I1Z2_KLENI7.140e-5839.023'-5'-exoribonuclease family protein n=1 Tax=Klebs... [more]
A0A5D6XYY3_9STRA9.500e-5741.12Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X0U9_GLOUD4.200e-5538.49Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 37..179
e-value: 4.1E-17
score: 62.9
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 10..299
e-value: 8.6E-71
score: 240.6
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 212..267
e-value: 4.1E-9
score: 36.3
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 10..291
NoneNo IPR availablePANTHERPTHR11097:SF8EXOSOME COMPLEX COMPONENT RRP42coord: 10..291
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 9..236
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 208..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1106contigD-dichotoma_M_contig1106:39327..44549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1106.926.1mRNA_D-dichotoma_M_contig1106.926.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1106 38339..44772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1106.926.1 ID=prot_D-dichotoma_M_contig1106.926.1|Name=mRNA_D-dichotoma_M_contig1106.926.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=313bp
MSRSTLAGLNISASERQYVTLGVELGTRGDGRGRLDYRTLSVQAGVLAQT
NGSARVTIAHNGTDVLATVKVEVGEPAIGAPMRGRIEACVECSNSLFPKF
DERSSADVNAALSRALERSMACAGGIDLDSLGIVEGKFCWVIFVDVLVLQ
ARRAIRADGNLLDASSFAAFTALNTTRVPKVTPLVGEGGTVDDFEMSSDV
TEAVPIVGIEKVPICLTMSTIDGHFIIDASMEEEACVEASMTVFVDRLGR
ICGSRKEGAGSVPLQHLGGMAQCAMAVGKRVFEILDAAISKAPREKGTDG
EPEVGASGVGFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf
IPR015847ExoRNase_PH_dom2
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf