prot_D-dichotoma_M_contig1104.915.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1104.915.1
Unique Nameprot_D-dichotoma_M_contig1104.915.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length279
Homology
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BLAST of mRNA_D-dichotoma_M_contig1104.915.1 vs. uniprot
Match: D8LTF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF5_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 7.720e-9
Identity = 57/163 (34.97%), Postives = 77/163 (47.24%), Query Frame = 0 
Query:   54 SSPQQPQPYWVTVVASWFKLPLPASSTTSEDQTSLRETFEDDRAIIRELRDTNARLRAELSVLRAEMEMRGVNIKELESEVPSVAPTIPSASREETTKTRSEDVSQTPP--DGG--------------ALLVGLWTAALVIGGIFIPLAIGETARGVERWSDS 200
            + P Q  P+   ++ASWF LPL   +T+    T  R T +D RA I +LR +NA LR E+  LR  M  RG            V     +A+   T  T +    Q PP  +GG              A LV LW AA+ +GG+F+P+AIG  A    RW D+
Sbjct:   72 AQPLQQTPWLADIMASWFNLPL--RNTSPSGGTKRRSTRDDIRADILKLRVSNADLREEVLALRNSMVQRGFF---------PVDDVFATATATATGGTPASGNGQQPPTSEGGDPKPPAKLQREARLAALVVLWGAAVALGGVFVPIAIGVGAARSLRWLDN 223
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1104.915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTF5_ECTSI7.720e-934.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..278
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.76
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 166..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1104contigD-dichotoma_M_contig1104:110333..128413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1104.915.1mRNA_D-dichotoma_M_contig1104.915.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1104 110262..128759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1104.915.1 ID=prot_D-dichotoma_M_contig1104.915.1|Name=mRNA_D-dichotoma_M_contig1104.915.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=279bp
MHAIFLFAGGCLAFGSASAFLSLSSVPSRTLRRKGVGTQRTLCMRAIDRR
PRISSPQQPQPYWVTVVASWFKLPLPASSTTSEDQTSLRETFEDDRAIIR
ELRDTNARLRAELSVLRAEMEMRGVNIKELESEVPSVAPTIPSASREETT
KTRSEDVSQTPPDGGALLVGLWTAALVIGGIFIPLAIGETARGVERWSDS
RKLFLDPPEDVGSLFLMGLSACRRRALRRWSGATLVWATTATTPSRPERA
APGLPHEDPLVGAYLEVHPVRKSPPRWN*
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