prot_D-dichotoma_M_contig110.883.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig110.883.1
Unique Nameprot_D-dichotoma_M_contig110.883.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length217
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig110.883.1 vs. uniprot
Match: A0A4E0RAD5_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Thiomargarita nelsonii TaxID=1003181 RepID=A0A4E0RAD5_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 1.840e-5
Identity = 54/204 (26.47%), Postives = 92/204 (45.10%), Query Frame = 0 
Query:   17 VKNGDALTFVSEALGIGESTIRDPREDFVEHGTV--RTRDGSKRGPRRGPKAPPGLTLLLKEKVKGMNKAGRQVTVTGLQTWLASAPSEKETRLPIQVSNRTVRNWFGNLDFHRAKGKPGYTVTEERKARIRE--YLIDFTNAYKLDLDD--NSPYKIVYVDESYLHVNHRSDFSWF-EVNGDHRSTNKKGRGQRIIDVHVITK 213
            V+  DA +  +   G+G   + +  + F E G V   T  G++   R     PP +   +++ V G +  G       +Q  L      +   LP+    RT++N    + F        Y+ T ++   +RE  Y+    ++Y  ++ +  N  YK+VY+DES+LH  H   FSWF E  GD+      G+G+R   +H + K
Sbjct:   38 VQTRDAHSRTANYTGVGRRQVVEIIKHFKETGNVLPSTIAGNRTVHRTN--IPPTIEEYIRQFVFGKHLKGEVCNSNHIQDILKEILKRE---LPL----RTIQNHLDRMGF-------SYSRTRKKPRSLREKLYVRQQRHSYLYNIRNFRNLGYKLVYLDESFLHHYHGFQFSWFSETEGDYLE-RPAGKGRRWCFIHAMLK 224
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig110.883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4E0RAD5_9GAMM1.840e-526.47Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig110contigD-dichotoma_M_contig110:567141..567791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig110.883.1mRNA_D-dichotoma_M_contig110.883.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig110 565847..569448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig110.883.1 ID=prot_D-dichotoma_M_contig110.883.1|Name=mRNA_D-dichotoma_M_contig110.883.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=217bp
MRLVLPLYFHLVLKKRVKNGDALTFVSEALGIGESTIRDPREDFVEHGTV
RTRDGSKRGPRRGPKAPPGLTLLLKEKVKGMNKAGRQVTVTGLQTWLASA
PSEKETRLPIQVSNRTVRNWFGNLDFHRAKGKPGYTVTEERKARIREYLI
DFTNAYKLDLDDNSPYKIVYVDESYLHVNHRSDFSWFEVNGDHRSTNKKG
RGQRIIDVHVITKAAQ*
back to top