prot_D-dichotoma_M_contig110.880.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig110.880.1
Unique Nameprot_D-dichotoma_M_contig110.880.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length145
Homology
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BLAST of mRNA_D-dichotoma_M_contig110.880.1 vs. uniprot
Match: A0A397USF1_9GLOM (Ribonuclease P/MRP protein subunit POP5 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397USF1_9GLOM)

HSP 1 Score: 52.4 bits (124), Expect = 7.520e-6
Identity = 31/105 (29.52%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:    1 MVLLKNRYII-ASISGRTGH----VRNLTTKDIAVMLKRSVEVNFGEFGSAQASRTMKVCSYDQTSGVFVVRTSVDIYHMVRLCLTLLTGSSGMRISVNVEALTG 100
            MV LK+R+I+  ++   T H    +  LT+ DI + +K S+++NFG++G    S ++ V  Y   + + ++R S D Y M    LT +T  +    ++ V  + G
Sbjct:    1 MVRLKHRWILFETLFENTSHQDTSIDPLTSHDIYITVKESIQLNFGDYGRGCTSSSLNVKYYSPHTNIGLLRVSRDYYRMAWCALTFITQINSRSCTIRVLHVGG 105
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BLAST of mRNA_D-dichotoma_M_contig110.880.1 vs. uniprot
Match: A0A397VAC4_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397VAC4_9GLOM)

HSP 1 Score: 49.7 bits (117), Expect = 8.370e-5
Identity = 33/112 (29.46%), Postives = 62/112 (55.36%), Query Frame = 0 
Query:    1 MVLLKNRYII-ASISGRTGH----VRNLTTKDIAVMLKRSVEVNFGEFGSAQASRTMKVCSYDQTSGVFVVRTSVDIYHMVRLCLTLLTGSSGMRISVNVEALTGCRRSFKV 107
            MV LK+R+I+  ++   T H    +  LT+ DI + +K S+++NFG++G    + ++ V  Y   + + ++R S D Y MV   LT +T  +    ++ V  + G + +FK+
Sbjct:    1 MVRLKHRWILFETLFENTSHQDTSIDPLTSHDIYITVKESIQLNFGDYGRG-CTYSLNVKYYSPHTNIGLLRVSRDYYRMVWCALTFITQINSRSCTIRVLHVGG-KSTFKL 110
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig110.880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A397USF1_9GLOM7.520e-629.52Ribonuclease P/MRP protein subunit POP5 n=2 Tax=Gi... [more]
A0A397VAC4_9GLOM8.370e-529.46Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038085Rnp2-like domain superfamilyGENE3D3.30.70.3250coord: 3..115
e-value: 1.1E-9
score: 40.3
IPR038085Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 1..111
IPR002759Ribonuclease P/MRP protein subunitPFAMPF01900RNase_P_Rpp14coord: 7..106
e-value: 4.1E-13
score: 49.5
NoneNo IPR availablePANTHERPTHR10993OCTANOYLTRANSFERASEcoord: 1..104
NoneNo IPR availablePANTHERPTHR10993:SF12RIBONUCLEASE P/MRP PROTEIN SUBUNIT POP5coord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig110contigD-dichotoma_M_contig110:428333..431862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig110.880.1mRNA_D-dichotoma_M_contig110.880.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig110 427310..431932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig110.880.1 ID=prot_D-dichotoma_M_contig110.880.1|Name=mRNA_D-dichotoma_M_contig110.880.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=145bp
MVLLKNRYIIASISGRTGHVRNLTTKDIAVMLKRSVEVNFGEFGSAQASR
TMKVCSYDQTSGVFVVRTSVDIYHMVRLCLTLLTGSSGMRISVNVEALTG
CRRSFKVAMMKAHAVGYARAGLSEKTASLLLKQKELEPEDEMDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038085Rnp2-like_sf
IPR002759RNase_P/MRP_subunit