mRNA_D-dichotoma_M_contig1087.747.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI) HSP 1 Score: 836 bits (2160), Expect = 3.420e-288 Identity = 475/782 (60.74%), Postives = 563/782 (71.99%), Query Frame = 2
Query: 305 MRLVRVGLPLAIMLGLVASTSAFLQRVRPTHVLVPAHKYQAAVCRSRV---PRMA----RNMRVMSATVEADMDDVAVTQAPPEET-EASAPDIPVEGGEMVDVTADATEPDDLDEILGEDDSAEPAVQIPMDTIIIGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTP--REKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGG-----ERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIADEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEFISGQVVSIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPADQVQRRRGGRGSGGMDDYXXXXXXXXXXXXXXXXXXXXXXXXXXNSASFEREDFGGRGSGSAPTNSDDGADWQYFLNDYFEEKD 2605
MR VRV LPLA+MLGL S++AFLQ VRPT+ +VPAHKY AAV R+R PR A R MR+MSA V D+ T+A E T E PV ++ + DD AV I ++ I++GEEYEGV+NNVV+YGAFVDIGTEVNGLVHISQLADEFVANCDD VKEGD VRVRV+N+D EARKLVLSMRQK R+ + QG+V KY M+ EDPSQF+ A VENIVSYGAFF LEDGCSGFVHISQMSP GEHV +VSDVL++GQ V VRIRE+DEKLGRIN+SLLP + R P KDVSHL G DP EFRKG VSAVADYGLFVN+EGVDGLLHVSKMS DRSITS NI ++EGQEVE+RI++ N NKMSLSML E D+ + ++P EW++G VVS++ YGAFVRL VDGMVHISQ+ G+RV SVY +++GQ+V+VRILE D +KLRLTMR+ ++ A G G +R +K SVE +LN+ P+EWISG VASIT+FGAF+AVD DTDGL HISQIA++HV+NV+D L++GQ VQVRVIEVDVDNCRLGLSMREPR SPRG G KKDVS LLGRDP+EFI G+VVSIVPYGAFVNIEG++DGLVHISE+A+GRVD+VEDV ++GQEVQVRI+++N DNNTVNLSMVPA R GG G D XXXXX +SA+F REDF + ADWQ FLN+YF++K+
Sbjct: 1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAV----DETETTEAAAEATLEEXXXXXPVXXXXXXPISPAMEDDDD-------------AVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPRGARG---KKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGG----GYGD------EGFGAEGGRRGRGGGXXXXXMDSAAFGREDFADT---TQXXXXXXXADWQQFLNNYFDDKE 749
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA) HSP 1 Score: 479 bits (1232), Expect = 1.300e-150 Identity = 286/664 (43.07%), Postives = 389/664 (58.58%), Query Frame = 2
Query: 644 DSAEPAVQIPMDTIIIGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQ-GDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRD-PEFDDAPSGETGGGERGPR--RKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIADEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEFISGQVVSIVPYGAFVNIEGD--VDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPA----DQVQRRRGGRGSGGMDDYXXXXXXXXXXXXXXXXXXXXXXXXXXNSASFEREDFGGRGSGSAPTNSDDGADWQYFLNDYFEEKD 2605
D++ A + + +++G++YEGVV+NV+SYGAFVDIG E NGLVHISQLAD FV+N + V EGD+V V+V+++D +KLVL+MR R Q D+S Y ++ DP + + TVE++V YGAF L +GCSGF+HISQ+ P E V+ VSDV+++GQ V VR+R++D+ L R+NLSLLP+S + T KDVS L D FR G VSAV DYG FV V+GVDGLLH+SK+ ++T +RE+ GQEV VRIL + NK+SL+M+ D D + P EWI+G VVS YGAFV L G+DGMVHIS++G RV +V + L +G VKVR++EV +K+RL+MR+ + AP G GG R R R V AY + +EW+ G V S T FGAF+A+ DGL H+S++A V D L GQ ++VRVI+VD + R+GLS+R+ R A +D+S L G D F+ G V S+V YG FV ++ ++GL+H+S+L+ RV+ V DVV G +VQVR+ EV+ D VNLSM+P D+ + R G G G D N E ADWQ +LN YFE+KD
Sbjct: 63 DNSAAASKTLLADLVVGQQYEGVVSNVLSYGAFVDIGAEANGLVHISQLADAFVSNPTEIVAEGDSVSVKVLSIDQAEKKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGATSAAAT---KDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISELGEG--RVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARRAP--------VSRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRSRNARRGTGEDGAADDASDPFGTGERRKSPRPRFNDYEDSALNVGGGE-------------------ADWQKYLNQYFEKKD 694
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA) HSP 1 Score: 418 bits (1075), Expect = 3.570e-127 Identity = 292/816 (35.78%), Postives = 415/816 (50.86%), Query Frame = 2
Query: 305 MRLVRVGLPLAIMLGLVASTSAF--LQRVRPTHVLVPAHKYQAAVCRSRVPRMARNMRVMSATVEADMDDVAVTQAPPEETEASAPDIPVEGGEMVDVTADATEPDDLDEILGEDDSAEPAVQIPMDTIIIGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPA--TSQGDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDG------------CSGFVHISQMSPPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPI--SADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIADEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASP--------RGGGGRGAKKDVSFLLGRDPEEFISGQVVSIVPYGAFVNIE--GDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPADQVQRR--RGGRGSGGMDDYXXXXXXXXXXXXXXXXXXXXXXXXXXNSASFEREDFGG----RGSGSAPTNSDDGA---------------DWQYFLNDYFEEKD 2605
MR RV LP A++LGLV + F L R H+ VPA ++ AAV SR R R + + ++ EA + V + PE+T+ S DL +G Y+G+VNNVV YG FVDIG VNGLVH SQL++ FV N + V +GD+V VRVI +DV+AR+L LSMR R A S DV+ Y A + DP++F+ TV+ ++ GAF L G GF+H SQ+ P E V + D LS GQ V VRIRE+D +L RI+LSLLP+ D S + ++DVS + G DP EFR G V ++ +YG+FV ++GVDGLLH S++ R ++ +R +F GQ+V VR+ + N++SLSM+ D + F +PP WIDG V + +GAFV + GVDG+VHISQ+ + ++V + + +G V+VR++EVD R + RR V Y+ P+ W+ G VA++ FGAF+ +D DGL H SQI +D L GQ V+VRV+ D + RL LSM +P A+ R G A +DVS L G DP+ F++G V S++P+G FV ++ G + GL+H+SEL+ GRV+ V +VV G ++VR+ EV+ ++LSM+ + R RGG GG + + E + FGG R P +DDGA DW+ +LN+YF +KD
Sbjct: 1 MRCPRVSLPSAVLLGLVLRSHGFVVLSSTRQ-HIHVPARQHSAAVSCSRCSRNRRAVLMYISSTEA--VSLPVAEERPEKTKLS----------------------DLQ---------------------LGVMYQGIVNNVVDYGVFVDIGASVNGLVHKSQLSNTFVTNPEKIVSQGDSVTVRVIGIDVDARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPER-RXXXXXXXXXXXXXXXXXXXXXXXXXRRGVKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGSDGGSS-------------------------RTGDGGADETDLFGGGSSARKKSPRPRFNDDGASXXXXXXXXXXXXEQDWRKYLNEYFAKKD 742
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A1V5US35_9BACT (30S ribosomal protein S1 n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5US35_9BACT) HSP 1 Score: 231 bits (590), Expect = 5.760e-60 Identity = 160/549 (29.14%), Postives = 291/549 (53.01%), Query Frame = 2
Query: 680 TIIIGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKE-GDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVE-GVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLD--IPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIA-DEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEFISGQVVSIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEV 2311
T+ G G V + YGAF+DIG ++GL+HI+ ++ V+N D V G + +V+ LD + +K+ L ++Q ++NP GD KY+ + + TV+NI YG F TLE G G +H+S +S G +D S GQ + ++ +++ ++ +I L + ++ D ++T + N G + ++ +YG+FV +E G++G +H+S +S + I + E + G +EV++L + ET K++L + +D T ++ + ++GKV ++ ++GAFV L +G++G++HIS + S +R+ E L+ G VKV+I+E++ +K+ L+ + D ET P + G + +FGAF+ V+ +GL H S +A ++ ++ + L+ G+ ++V V+ +D DN ++ L +++ A P +++ D E + G+V SI YGAF+ + ++GL+HIS+LA RVD VE+VV+ GQ+V+V++ EV
Sbjct: 209 TLQEGSTVAGTVKSFTEYGAFIDIGG-IDGLLHITDMSYGHVSNPADVVSSIGSQITCKVLKLDRKTKKISLGLKQLSKNPWEEVGD--KYKV------GEIYECTVKNIADYGVFATLEPGVDGLIHVSDLSWSGR--TRPNDFKS-GQKIKAKVIDVNLEIKKIKLGIKQVTKDPWEKVTETYPE---------NTITNGKIKSILNYGVFVELEDGIEGFIHISNISWTKKINHPS--ELLKVGDSIEVKVLKLDLETKKINLG--IKQTHVDPWTMVESKFKVEQIVEGKVTNVKKFGAFVELEEGIEGLIHISDL-SWTKRLNHANEMLKTGDPVKVKIIEINPAEKKIALSYKHLTKDPWSDIET------------------RFPIGATVEGKITHFASFGAFVEVEEGVEGLLHTSDLAWNKKYSDPSEVLKEGETIKVLVLNIDKDNRKMSLGVKQ-LAQDPL----------IAYKEKMDSGEMLDGKVKSIQEYGAFIEFDDGIEGLIHISQLADERVDKVENVVKAGQQVKVKVIEV 702
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A7X7HWN8_9BACT (30S ribosomal protein S1 n=3 Tax=PVC group TaxID=1783257 RepID=A0A7X7HWN8_9BACT) HSP 1 Score: 201 bits (510), Expect = 5.940e-51 Identity = 169/560 (30.18%), Postives = 276/560 (49.29%), Query Frame = 2
Query: 680 TIIIGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMS-PPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIA-DEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEFISGQVVSIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPA 2353
T G G V V V+IG + GL+ ++ D + GD + V + L+ E +VLS + A Q + A EE + + TV+ V G + G F+ SQ+ P +++E +GQT+ ++ +I+++ I LS D+ T RE+ L + P + R+GVV + D+G FV++ G+DGLLH++ MS R + RE Q GQE+EV +LD N E ++SL + + + P I GKVV++V YGAFV+L GV+G+VH+S++ S +RVA + L +G EV +L V+ QK+ L +R E + P + G P I G V + TN+GAF+ ++ DG+ H+S ++ + + + L+ G V+ V+EV +N R+ L +++ + G GR + +G + I G+V + +GAFV +E VDGLVHIS+++ V + DV+Q GQEV+ R+ +++P + + LS+ A
Sbjct: 30 TFTEGAIVTGTVVEVRPQEVLVNIGYKSEGLLPAAEFKDV------SEIHVGDELEVLLERLEDEHGMVVLS-----KTRAEQQRNWDNVTASCEE--GKVVSGTVKGKVKGGLLVDV-GGVDAFLPGSQIDIVPVRNLDEY-----MGQTLECKVLKINKERRNIVLS-----RRDLIEETRREQKKKLLAEIQPGQTRRGVVKNITDFGAFVDLNGMDGLLHITDMSWGRI---NDPREVVQVGQELEVFVLDVNQEKERISLGLKQKQQNPWEEIEMKYPKGTRIRGKVVNLVPYGAFVQLEDGVEGLVHVSEI-SWTKRVARASDVLNVGDEVDAVVLNVNKEEQKISLGIRQTEAN--PWDDVAG----------------KYPIGSRIKGKVRNFTNYGAFVELEEGVDGMIHVSDMSWARKINHPSEVLKKGDEVEAIVLEVSPENQRISLGLKQAQEDPWAGISGR-------YRIG----QLIKGKVSKLASFGAFVELEEGVDGLVHISQISDDHVAKIRDVLQPGQEVEARVIKIDPIDRRIGLSIKAA 532
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A7X8UMT8_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8UMT8_9BACT) HSP 1 Score: 200 bits (509), Expect = 1.440e-50 Identity = 169/584 (28.94%), Postives = 292/584 (50.00%), Query Frame = 2
Query: 692 GEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEEDPS-QFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLS-IGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSH--LTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIA-DEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEFISGQVV-----SIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPA-----------DQVQRRRGG 2380
G+ +G + +V A V++G + G V + + + +K GD V V + ++ + +VLS R+ +R + ++ ++E + + V + G + G F+ SQ+ V SD+ IGQ + +I +ID++ I +S + + R + H L + + RKG+V +AD+G FV++ G+DGLLH++ MS R G+ E GQE+EV +L + + K+SL + +E P + + GKVV+++ YGAFV+L +G++G+VHIS+M S +R+ E + +G EV+V +LEVD +Q++ L M+ E + T E Y PP I+GTV ++TN+GAF+ ++ DGL H+S ++ V + + L+ GQ +Q V+ VD + R+ L +++ P L + P+ ++ GQ+V I +G FV +E +++GL+H+SELA +V+ +DVV+VG E++V+I V+ D+ + LS+ A D Q+RRGG
Sbjct: 47 GKILKGRIVGIVGDEAVVEVGLKSEGTVDLHEWDNPAQ------IKVGDVVEVLLEEMESDGGLVVLSKRKADR--------IRGWERILEVNKEGDTVTGEVTRKIKGGLLVDI--GVPAFLPASQVD-----VRRPSDIGEFIGQRIDAKILKIDQERRNIVVSRRKLIEE-------RRAEAKHDLLNEIIEGQSRKGIVKNLADFGAFVDLGGLDGLLHITDMSWGRI---GHPSEMLSIGQEIEVVVLSVDRDKEKISLGLKQKSENPWDQVEAKFPASTRLKGKVVNIMSYGAFVQLEEGLEGLVHISEM-SWTRRINHPSEVVNVGDEVEVIVLEVDRDKQEISLGMKQAETNPW---------------TLVKEKY---PPGTVITGTVRNMTNYGAFVEIEEGIDGLLHVSDLSWTRKVGHPSEVLKKGQELQCVVLAVDEEKMRVALGLKQ-LTEDP--------------WLRQIPDHYLPGQIVCGKVTKITNFGVFVELEDELEGLLHVSELADHKVENPKDVVKVGDEIEVKILRVDSDDRKIGLSLKRAQWAAEDTTSTSDSPQKRRGG 565
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A2E3DKS4_9PLAN (30S ribosomal protein S1 (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DKS4_9PLAN) HSP 1 Score: 198 bits (504), Expect = 7.320e-50 Identity = 161/552 (29.17%), Postives = 275/552 (49.82%), Query Frame = 2
Query: 743 VDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARK-------LVLSMRQKNRNPATSQGDVSKYQAMIEE-DPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIA-DEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEF-----ISGQVVSIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPAD 2356
+D+G + G + +S+ +E ++ K GDTV+V + ++ E + LS R+ + + + AM+E+ D Q + V + G + G + F+ SQ+ N+++D IGQ V + +IDE R N+ + S + R RE ++ L+ NE RKGVV +AD+G FV++ G+DGLLH++ MS +R G+ E QE+EV IL + E K++L M + P + G+VV+++ YGAFV+L G++G+VHIS+M S +R+ E +Q+G E+ V IL +D Q+L L M+ + + E P D ++G V ++TN+GAFI ++ DGL H+S I+ + + ++ LE Q V+ +V+ +D++ R+ L +++ D PE + I+G V I +G F+ +E ++GL+HISE+ G V+ E +VQVGQE++V++ V+ ++ + LS+ D
Sbjct: 61 IDVGFKSEGSISLSEWGEE-----EEQPKVGDTVQVLIEEVEDEFGPANDPHGMVSLSKRKAEK--------ILAWTAMMEKIDEGQIVKGLVTRKIKGGLLVDI--GVNVFLPASQVDI--RRPNDIADY--IGQEVECEVLKIDE--ARRNIVVSRRSMIERQRRADREALLAELS---ENELRKGVVKNIADFGAFVDLGGIDGLLHITDMSWERI---GHPSEMVSIDQEIEVMILKIDHEKEKIALGMKQKSANPWEGIEERYPVNTKVQGEVVNVMSYGAFVKLEAGIEGLVHISEM-SWTKRINHPNEMVQIGDEIDVVILSIDKGGQQLSLGMKQTQANPWE------------------EVEKRYPIDSVVNGRVRNLTNYGAFIELEEGIDGLLHVSDISWTRKIGHPNEVLEKSQEVECKVLSMDIERRRIALGIKQ---------------LDADPWTAEIPERYQPGQKITGNVTKITNFGVFIGLEDGLEGLLHISEMTDGEVEDPETLVQVGQEIEVKVLRVDTEDRKIGLSLKRVD 551
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: E8R5M0_ISOPI (SSU ribosomal protein S1P n=2 Tax=Isosphaera pallida TaxID=128 RepID=E8R5M0_ISOPI) HSP 1 Score: 196 bits (497), Expect = 3.460e-49 Identity = 167/596 (28.02%), Postives = 299/596 (50.17%), Query Frame = 2
Query: 611 PDDLDEILGEDDSAEPAVQIPMDTIIIGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMS---PPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLL------DNERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIA-DEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVSFLLGRDPEEFISGQVVSIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMV--PADQV 2362
PD LD+ LG S E +P I I + E VV D+G + G V +S+ +D GDTV + +++ + ++VLS R+ R A + ++KY+ + + V + G + G + F+ SQ+ PP ++ D I Q + I +IDE R N+ +S + MT + + L ++P + RKGVV +AD+G FV++ G+DGLLH++ MS R N + E+EV ++ + E K++L + DN Y P + G+VV+++ YGAFV+L +G++G+VHIS+M S +R+ E + +G +V+V +L ++ +Q++ L M+ + + + + PP+ I GTV ++TN+GAFI ++ DGL HIS ++ + + ++ L+ G+ ++ +V+ VD + R+ L +++ R + D+ P + ++G+V + +G FV +E ++GL+HISEL+ +V++ +DVVQ+GQE++VR+ V+ + + LS+ P+D+V
Sbjct: 26 PDALDDFLGSGPSYENNTIVPGKIIDILNDEEVVV----------DVGYKSEGRVKLSEWSDSPPPQI------GDTVEFLLEDMNDQTGEIVLSYRKAERIRAWERV-IAKYKE------NDVVKGKVTRKIKGGLLVDI--GVNVFLPASQVDIRRPP-----DIGDY--IDQEIECVILKIDE--ARRNIV---VSRRKLIEMTRELQKKTLLAEIEPGQIRKGVVKNIADFGAFVDLGGIDGLLHITDMSWGRI---NNPTDMVAINDEIEVYVIHVDKEKEKIALGLKQKTASPWDNVAEKY------PVGSKVTGEVVNVMSYGAFVKLEEGIEGLVHISEM-SWTKRINHPSELVNIGDKVEVVVLNINKEKQEISLGMKQTQINPWD------------------QVAVKYPPNTEIEGTVRNLTNYGAFIEIEEGIDGLLHISDMSWTRKIGHPNELLQKGERIRCQVLSVDQERKRIALGLKQLREDP--------WENDIPKRY--QPNQMVTGKVTKLTNFGVFVELEPGLEGLLHISELSDQKVESPDDVVQLGQEIEVRVLRVDRNERKIGLSLKKPPSDEV 546
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A1V6A8G2_9BACT (Cytidylate kinase n=1 Tax=bacterium ADurb.Bin157 TaxID=1866935 RepID=A0A1V6A8G2_9BACT) HSP 1 Score: 200 bits (508), Expect = 5.900e-49 Identity = 141/462 (30.52%), Postives = 251/462 (54.33%), Query Frame = 2
Query: 689 IGEEYEGVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEEDPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLSIGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTGVDPNEFRKGVVSAVADYGLFVNV-EGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDN----ERLDYATFLDIPPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIADEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMRE 2059
+ + +G V+ +V YGAF+D+G V GL+H + L+ ++N + V+ GD V +++ +D E K+ L ++QK NP + ++Y+ Q V+N++ +GAF LE+G G VHIS +S +++ + V++ G + V ++EID++ RI+LS + P E+ S T D G V+ + D+G F+ + EGV+GLLH+S M + + + +E ++GQEV V+IL+ + +++SL + ER++Y + E + G V ++V YGAFV+L G++G++H+S++ Q V + + L++G +V V + E+D +QK+ L++R + D E+ R + +S+ GT++++ + GA I V G H+SQ+A + V N + ++VG V +V+E+D N RL LS+RE
Sbjct: 440 VDDVIKGTVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVISNPREVVQPGDEVEAKILKMDAEKGKISLGLKQKKENPWETVD--TRYKV------GQKYHGKVKNLMDFGAFVELEEGVEGLVHISDLSW-ARNIDHPNQVVNTGDEIDVIVKEIDKEKKRISLSYKEVLPH------PWEQVASQYTIGD---IVTGKVNNMTDFGAFIGIAEGVEGLLHISDMDWVKKVN--HPKEILEKGQEVSVKILNIDVANHRLSLGLKQTTVDPWERIEYEYKIG----EQVTGVVKNIVSYGAFVQLANGIEGLLHVSELSWQND-VENPEQALKVGDQVTVIVYEIDKNKQKIGLSLRRLQDDPWKDVES-------RFRRDSIH-----------QGTISNLLDNGAEIEVADGVIGFVHVSQLAAQRVNNPSEIVKVGDTVTYKVLELDRKNRRLKLSIRE 858
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Match: A0A2D6A367_9BACT (30S ribosomal protein S1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6A367_9BACT) HSP 1 Score: 194 bits (492), Expect = 3.170e-48 Identity = 165/559 (29.52%), Postives = 292/559 (52.24%), Query Frame = 2
Query: 707 GVVNNVVSYGAFVDIGTEVNGLVHISQLADEFVANCDDFVKEGDTVRVRVINLDVEARKLVLSMRQKNRNPATSQGDVSKYQAMIEE-DPSQFMDATVENIVSYGAFFTLEDGCSGFVHISQMSPPGEHVNEVSDVLS-IGQTVPVRIREIDEKLGRINLSLLPISADDISRMTPREKDVSHLTG-VDPNEFRKGVVSAVADYGLFVNVEGVDGLLHVSKMSVDRSITSGNIREKFQEGQEVEVRILDANPETNKMSLSMLLDNERLDYATFLDI----PPTEWIDGKVVSMVEYGAFVRLPQGVDGMVHISQMGSQGQRVASVYEELQMGQEVKVRILEVDTVRQKLRLTMRDPEFDDAPSGETGGGERGPRRKTNSVEAYLNIPPDEWISGTVASITNFGAFIAVDADTDGLCHISQIA-DEHVANVDDFLEVGQNVQVRVIEVDVDNCRLGLSMREPRAASPRGGGGRGAKKDVS--FLLGRDPEEFISGQVVSIVPYGAFVNIEGDVDGLVHISELAVGRVDTVEDVVQVGQEVQVRITEVNPDNNTVNLSMVPA 2353
G + + + FVD+G + G++H+S+ + V +K G + V V LD +LS R+ +R + ++ +IE + V + G + G + F+ SQ++ + DV IG+ + RI +IDE+ I +S + ++ REK+ + L G ++ + R+GVV +AD+G FV++ G+DGLLH++ M+ R T + + ++V++L + E +++L M ++L + DI P T G+VV+++ YGAFV+L +GV+G+VHIS+M S +RV E + +G V+V IL+V++ +Q++ L M+ E + VEA N PP ISG V ++TN+GAFI + DGL H+S ++ + V + + ++ G+ V+ V+ VD + R+ L +++ + P D+ F +G + ++G V + +G FV++E ++GL+HISELA +VD+ +VV+VGQ+V+VRI ++ P+ V L++V A
Sbjct: 51 GTIVRLSGHTVFVDVGYKSEGMIHLSEFQEPEV------LKPGMELEVLVEALDDGDGMALLSKRKADR--------IRSWEKIIETYKEGDEVSGAVTRKIKGGLLVDI--GVNAFLPASQVN-----IRRTEDVGDWIGKEITARIIKIDEERMNIVISRRRLIEEE------REKEKAKLLGEIEEGQVREGVVKNIADFGAFVDLGGLDGLLHITDMTWGRINTPSEL---VKIDDRLQVKVLKVDKERERVALGM----KQLTPDPWADIGVKFPVTSTHIGEVVNIMTYGAFVKLEEGVEGLVHISEM-SWTRRVNDPREVVSIGDNVEVVILDVNSEKQEISLGMKQTEVN----------------PWELVEA--NYPPGTIISGRVRNLTNYGAFIELQEGIDGLLHLSDMSWTKKVTHPSEVVKKGEEVRCVVLSVDQEKKRIALGLKQ-LSEDPW-------SNDIPSRFHIG----DTVTGTVTKLTNFGVFVSLEEGLEGLLHISELADHKVDSPAEVVKVGQKVEVRIIKIEPEERKVGLTLVSA 544 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1087.747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1087.747.1 >prot_D-dichotoma_M_contig1087.747.1 ID=prot_D-dichotoma_M_contig1087.747.1|Name=mRNA_D-dichotoma_M_contig1087.747.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=775bp MRLVRVGLPLAIMLGLVASTSAFLQRVRPTHVLVPAHKYQAAVCRSRVPRback to top mRNA from alignment at D-dichotoma_M_contig1087:153068..173927+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1087.747.1 ID=mRNA_D-dichotoma_M_contig1087.747.1|Name=mRNA_D-dichotoma_M_contig1087.747.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=20860bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:153068..173927+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1087:153068..173927+ >mRNA_D-dichotoma_M_contig1087.747.1 ID=mRNA_D-dichotoma_M_contig1087.747.1|Name=mRNA_D-dichotoma_M_contig1087.747.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=4650bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:153068..173927+ (Dictyota dichotoma ODC1387m male)back to top |