mRNA_D-dichotoma_M_contig1087.743.1 (mRNA) Dictyota dichotoma ODC1387m male
|
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: D8LCB9_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB9_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 4.380e-157 Identity = 246/325 (75.69%), Postives = 270/325 (83.08%), Query Frame = 2
Query: 1757 MKRSSSSTTSLTDMGLKTENGGTLL-ISESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPLYVRDEDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGEDVPRNLSVSRLSELTGDIDPEDIMSLQDPAAELEADNQRDLEDG------EEQYPASLIA 2710
MKRS SSTTSLTDMG+ + L I ESGEEGTLDYRLRFAM EH HSQQVISVWHDIPLYVRDE K TGHLNFVCEIPRCSRKKFEIAT+EVGNPIKQD KKG+LREFKKGDIFFNYGCFP+TWEDPEH HPDT FPGDNDPLDVCEIGLRIV+TGDVRQVKV+GVLAMIDEDETDWKVIVID++DRWAP+LNDV+DVERLLPGV+ +IREWFRTYK+PDGKP NKFAL+ERCMGR YA+KV +ECH++WR LVGKAE GE V NLSVSRLS++ DI+ E + A E EAD E +YP SLIA
Sbjct: 1 MKRSGSSTTSLTDMGVPAASAEDKLNIFESGEEGTLDYRLRFAMAEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTKFPGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDREDRWAPELNDVEDVERLLPGVVPAIREWFRTYKVPDGKPENKFALDERCMGRSYAMKVVSECHLAWRNLVGKAELGE-VKSNLSVSRLSDMGSDIELESATN----ALEDEADGXXXXXXXXXXXXXEGEYPTSLIA 320
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: A0A835YXT5_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT5_9STRA) HSP 1 Score: 428 bits (1100), Expect = 6.640e-136 Identity = 207/304 (68.09%), Postives = 246/304 (80.92%), Query Frame = 2
Query: 1802 LKTENGGTLLISESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPLYVRDE-DGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGEDVPRNLSVSRLSELTGDIDPEDIMSLQDPAAELEADNQRDLEDGEEQYPASLIA 2710
++ + ++ + +GEEGTL+YR++ ME+H+ +VIS WHDIPLYV DE K TG LNFVCEIPRCSRKKFEIAT E GNPIKQD KKG+LREFKKGDIFFNYGCFP+TWEDPEH+HPDTG GDNDPLDVCEIG+RIV TGDVRQVKV+GVLAMID+ ETDWKVI ID DDRWAP+LNDV+DVERLLPGV+DSIREWFRTYKIPDGKPPN F L ERCM R YA+KV EC+++W+ LV A G +VPRNLSVS+L++L +++P+ ++S D LEA + + ED YPASLIA
Sbjct: 1 MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHD--SKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASD---HLEATSDGEAED----YPASLIA 295
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: A0A7S2V803_9STRA (Inorganic diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V803_9STRA) HSP 1 Score: 364 bits (935), Expect = 2.140e-111 Identity = 170/271 (62.73%), Postives = 206/271 (76.01%), Query Frame = 2
Query: 1796 MGLKTENGGTLLISESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPLYVRDEDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGEDVPRNLSVSRLSELTGDIDP 2608
M + + GTL+ E G TL+YR++ ++V+S+WHD+PLY DE G TG LNFVCEIPRCSRKK+EIATDE GNPIKQD KKG LR FKKGDIFFNYGCFP+TWEDP+ HPD G GDNDPLDVCEIG+RIV T +VRQVK++GVL +ID+ E DWK+I ID+ DRWAP+LND+DDVERLLPGVI +IREWFRTYK+PDGKP N F LEERCM ++YA+ V AECH +W+ LV + + +NLSV L +L + DP
Sbjct: 55 MPQRRRSSGTLVTEEVGHADTLEYRIQHVELTDSEEKRVLSLWHDLPLYCTDEYGLRTGSLNFVCEIPRCSRKKYEIATDEPGNPIKQDEKKGQLRVFKKGDIFFNYGCFPRTWEDPDFVHPDVGVGGDNDPLDVCEIGIRIVPTAEVRQVKILGVLCLIDDGEADWKIIAIDETDRWAPELNDMDDVERLLPGVIGTIREWFRTYKVPDGKPENVFGLEERCMPKEYAMHVVAECHQAWKGLVTQQKPA----KNLSVVNLKDLVMEADP 321
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: A0A7S4E7X2_9STRA (Inorganic diphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X2_9STRA) HSP 1 Score: 338 bits (866), Expect = 5.820e-102 Identity = 159/242 (65.70%), Postives = 188/242 (77.69%), Query Frame = 2
Query: 1829 LISESGEEGTLDYRLR-FAMEEHEHSQQVISVWHDIPLYVRDEDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGED 2551
LI E G+ GT DYR+ A E + + +S+WHD+PL G NF+CEIP+C+RKKFE+AT E PIKQD KKG+LREFKKGDIFFNYGCFP+TWEDP H PDTG+PGDNDPLDVCEIGLR V TG++R VKV+GVLAMID+DETDWKV+ ID +DRWAP+LND++DVERL+PG + IREWFRTYKIPDGKPPNKFAL+E+CMG KYA KV E H W LV K + G+D
Sbjct: 62 LIMERGQAGTKDYRVHVLAKGEEDMTVAELSLWHDVPLVAEG------GLFNFICEIPKCTRKKFEVATTEGATPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQVQTGEIRPVKVLGVLAMIDDDETDWKVVAIDAEDRWAPELNDINDVERLIPGTVSLIREWFRTYKIPDGKPPNKFALDEKCMGAKYAHKVIHETHTFWCDLVQK-QLGDD 296
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: A0A6U4FME2_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FME2_9STRA) HSP 1 Score: 340 bits (873), Expect = 1.750e-101 Identity = 171/292 (58.56%), Postives = 213/292 (72.95%), Query Frame = 2
Query: 1787 LTDMGLKTENGGTLLISESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPLYVRDEDGKA-TGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGEDVPRNLSVSRLSELTGDIDPEDIMSLQDPAAELEADN 2659
L+ + K + ++ +S G+EGT +R++ A E S + IS WHD+ L+ R+E+ A TG LNFVCEIP+ SRKKFE+AT+E NPIKQD KKGMLREFKKGDIFFNYGCFP+TWEDP HPD G GDNDPLDVCEIGL+IV TG VRQVKV+G L MID+ E DWKVIVID +DRWAPDLNDV+DVERLLPG + ++REWFRTYKIPDGKPPN+F L ERCM R+YA+++ E H +WR LV + + ED L V ++++ + E+ P E EAD+
Sbjct: 132 LSAISSKKRSHSSVSLSSLGDEGTQSHRVQAACER---SNEPISFWHDVALFHREEESNAATGALNFVCEIPKFSRKKFEVATNEPQNPIKQDTKKGMLREFKKGDIFFNYGCFPRTWEDPCFVHPDAGVGGDNDPLDVCEIGLQIVPTGAVRQVKVLGCLCMIDDGEADWKVIVIDVNDRWAPDLNDVEDVERLLPGTVSAVREWFRTYKIPDGKPPNRFGLNERCMPREYAMQIVGETHHAWRRLV-QHQTSED----LHVPPVADIAHFDEDEEAAEEYCPKLEPEADS 415
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: A0A7S4A2D5_9STRA (Inorganic diphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2D5_9STRA) HSP 1 Score: 332 bits (851), Expect = 8.450e-100 Identity = 159/255 (62.35%), Postives = 186/255 (72.94%), Query Frame = 2
Query: 1829 LISESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPLYVRDEDGKATGH-------LNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWR-LLVGKAEAGEDVPRNLS 2569
LI E G G+ DYR+ ++ + +S+WHD+PL A NFVCEIP+C+RKKFE+ATDE PIKQD KKG+LREFKKGDIFFNYGCFP+TWEDP H DTG+PGDNDPLDVCEIG+R + TG VR VKV+GVLAMID+DETDWKV+ ID DDRWAP+LNDV+DVERLLPG I IREWFRTYKIPDGKPPNKFALEERCM R YA V + H ++R LL G +P ++S
Sbjct: 54 LILERGSVGSKDYRVHVLQKDTSQRARELSLWHDVPLVAPSAPSSAPASPRNAPPLFNFVCEIPKCTRKKFEVATDETKCPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSKDTGYPGDNDPLDVCEIGIRQIGTGQVRAVKVLGVLAMIDDDETDWKVVAIDVDDRWAPELNDVEDVERLLPGTISFIREWFRTYKIPDGKPPNKFALEERCMPRAYAHGVIRDTHAAYRDLLASGGHEGLHLPADIS 308
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: A0A7S3L5X3_9STRA (Inorganic diphosphatase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5X3_9STRA) HSP 1 Score: 330 bits (846), Expect = 2.240e-99 Identity = 159/267 (59.55%), Postives = 200/267 (74.91%), Query Frame = 2
Query: 1832 ISESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPL-YVRDEDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLV-GKAEAG--------EDVPRNLSVSRLSELTGDI 2602
I+ +GEE TL+YR++ + + IS+WHD+ L ++ + + T +LNFVCEIP+ +RKK+EIATDEVGNPIKQD KKG LREFKKGD++FNYGCFPQTWEDP H HPD G GDNDPLDV EIG RIV GD+R VKV+GV+ MIDE E DWKV+ ID +D+WAP LND+DDVER +PG++ +IREW+RTYKIPDGKPPN FAL+E+ M + YA+KV ECH SW LL+ G+ E G +D+ RNLS + L L D+
Sbjct: 32 IASNGEEDTLEYRMQAQSD-----GKKISLWHDVSLVHIDPQTKQETPYLNFVCEIPKFTRKKYEIATDEVGNPIKQDTKKGQLREFKKGDLYFNYGCFPQTWEDPTHVHPDAGARGDNDPLDVVEIGARIVKPGDIRPVKVLGVICMIDEGECDWKVVTIDANDKWAPFLNDIDDVEREMPGMLSAIREWYRTYKIPDGKPPNVFALDEKFMDKAYAMKVIEECHHSWELLISGEKERGLDDHGDEVKDLVRNLSRNSLFTLAMDL 293
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: F0YGD1_AURAN (Inorganic diphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGD1_AURAN) HSP 1 Score: 331 bits (849), Expect = 2.740e-99 Identity = 158/247 (63.97%), Postives = 186/247 (75.30%), Query Frame = 2
Query: 1829 LISESGEEGTLDYRLRFA----MEEHEHSQQVISVWHDIPLYVRD-EDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGEDV 2554
L+ E G T DYR+ S + +S+WHD+PL D +T NFVCEIP+C+RKKFE+AT+E PIKQD KKG+LREFKKGDIFFNYGCFP+TWEDP HT PDTG+PGDNDPLDVCEIGLR V TG++R VKV+GVLAMID+DETDWKV+ ID +DRWA +LNDVDDVERLLPG + IREWFRTYKIPDGKPPNKFA EERC+ YALKV E H S+ L+ + + ED+
Sbjct: 63 LVLERGSANTTDYRVHVLDAPRAAGRSGSTKELSLWHDVPLVAADGAPESSTPTFNFVCEIPKCTRKKFEVATNEHVTPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHTSPDTGYPGDNDPLDVCEIGLRQVRTGEIRAVKVLGVLAMIDDDETDWKVVAIDAEDRWASELNDVDDVERLLPGTVGLIREWFRTYKIPDGKPPNKFAFEERCLPAAYALKVIHETHESYLELIKEGKGHEDL 309
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: F0Y2P4_AURAN (Inorganic diphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2P4_AURAN) HSP 1 Score: 330 bits (846), Expect = 4.530e-99 Identity = 155/243 (63.79%), Postives = 185/243 (76.13%), Query Frame = 2
Query: 1829 LISESGEEGTLDYRLRFAMEEHEHSQQV--ISVWHDIPLYVRDEDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLVGKAEAGED 2551
LI E G+ GT DYR+ ++ + ++ V +S+WHD+PL G+ + NF+CEIP+C+RKKFE+AT E PIKQD KKG+LREFKKGDIFFNYGCFP+TWEDP H PDTG+PGDNDPLDVCEIGLR + TG++R VKV+GVLAMID+DETDWK++ ID DRWA +LNDV DVERLLPG + IREWFRTYKIPDGKPPNKFAL E C G YA KV E H +W LV K + G D
Sbjct: 62 LIMERGQAGTKDYRVHVLAKDGDEAKTVAELSLWHDVPLAAPGSSGRGS-LFNFICEIPKCTRKKFEVATTEGATPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQIQTGEIRAVKVLGVLAMIDDDETDWKIVAIDAADRWASELNDVGDVERLLPGTVSLIREWFRTYKIPDGKPPNKFALGEECKGAAYAHKVIHETHEAWVNLV-KTQVGAD 302
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Match: W7TI24_9STRA (Inorganic diphosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI24_9STRA) HSP 1 Score: 327 bits (837), Expect = 9.060e-98 Identity = 169/323 (52.32%), Postives = 209/323 (64.71%), Query Frame = 2
Query: 1838 ESGEEGTLDYRLRFAMEEHEHSQQVISVWHDIPLYVRDEDGKATGHLNFVCEIPRCSRKKFEIATDEVGNPIKQDAKKGMLREFKKGDIFFNYGCFPQTWEDPEHTHPDTGFPGDNDPLDVCEIGLRIVSTGDVRQVKVIGVLAMIDEDETDWKVIVIDKDDRWAPDLNDVDDVERLLPGVIDSIREWFRTYKIPDGKPPNKFALEERCMGRKYALKVAAECHMSWRLLV----------GKAEAGEDVPRNLSVSRLSELTGDIDPEDIMSLQDPAAELEADNQRDLEDGEEQYPASLIA*RGGGTPPLSLPLIEETSRDSD 2776
+ GE T+DYR+ +H+Q+ IS+WH++PL+ D+D K TG LNF+CEIP+ +R+KFEI T E GNPIKQD K G R F KGDIFFNYGCFP+TWEDP+H D G GDNDPLDVCEIGLR + TG VRQVKV+GVL +ID+ E DWKVI ID++DRWA +LNDV DVERLLPG +D++REWFRTYKIPDGKP N+FAL E MG KY ++V E H +W+ LV + + + + RNLSV L EL D D + + +L GEE AS GG PP L E+ R D
Sbjct: 17 QEGEHDTVDYRVHSL----DHNQERISLWHELPLFAVDDDAKPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDQKNGKPRVFSKGDIFFNYGCFPRTWEDPQHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWARELNDVQDVERLLPGTLDAVREWFRTYKIPDGKPENRFALGEEFMGVKYTMRVIRETHEAWKRLVKSSGGWRGDLSREASSQSLHRNLSVPSLEELDIDSDHQAVCALL----------------GEEA--ASKACGSLGGPPPPGLRGGEDVGRGRD 317 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1087.743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1087.743.1 >prot_D-dichotoma_M_contig1087.743.1 ID=prot_D-dichotoma_M_contig1087.743.1|Name=mRNA_D-dichotoma_M_contig1087.743.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=331bp MIHTRQGNDRETMKRSSSSTTSLTDMGLKTENGGTLLISESGEEGTLDYRback to top mRNA from alignment at D-dichotoma_M_contig1087:65576..73525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1087.743.1 ID=mRNA_D-dichotoma_M_contig1087.743.1|Name=mRNA_D-dichotoma_M_contig1087.743.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=7950bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:65576..73525- (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1087:65576..73525- >mRNA_D-dichotoma_M_contig1087.743.1 ID=mRNA_D-dichotoma_M_contig1087.743.1|Name=mRNA_D-dichotoma_M_contig1087.743.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1986bp|location=Sequence derived from alignment at D-dichotoma_M_contig1087:65576..73525- (Dictyota dichotoma ODC1387m male)back to top |